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The map label for this gene is rbn [C]

Identifier: 46446532

GI number: 46446532

Start: 1087367

End: 1088536

Strand: Reverse

Name: rbn [C]

Synonym: pc0898

Alternate gene names: 46446532

Gene position: 1088536-1087367 (Counterclockwise)

Preceding gene: 46446533

Following gene: 46446530

Centisome position: 45.08

GC content: 35.9

Gene sequence:

>1170_bases
TTGACATTTTATACTTTATTATCAGTTGTTCCTGTTTTGGCGGTTTTATTTGGAATTGCTAAAGGATTTGGATTTGAAAA
AGCTTTAGAATCAGAGCTTAACCAACAATTTCTTGAACAAAAAGAGCTTGTCGAAAAAGTGATCGAATTTGCTTATACAT
GGTTAAAAACTGTTCAAGGCGGTGTCATAGCAGGGATTGGAACTTTAACCTTACTTTGGACAGTTTTTGGGCTTTTGAAT
AATATTGAAATGGCTCTGAACGCCATTTGGAAAACCAGGCACACACGTCCCTATAGCCGAAAAATTAGCGATTACTTAGC
AGCCATGCTTGTGGCTCCTCTTTTTCTCGTCACTTCAAGTAGTATAAATGTTTTTATCAATACACAAATCACTCAAACAG
CACATAATAATATTATCGTAGAAGCACTTAGTCCGTTTCTTTTTTATCTTTTAAAGCTTTTCCCCTATTTTTTGGGCTGG
CTCCTCTTTACTTTTGTCTATTTATTCATGCCTAATACAAAAGTTTATTTAAGATCCGCTTTGATTGCAGGTATTGTCGC
AGGAACAGCTTTTCAAATTTGGCAATGGATTTACATTAAATTCCAAATTGGGGTTGCTAGCTATGGAGCTATCTACGGAA
GCTTTGCAGCTTTACCCCTATTTTTAATTTGGCTCCAATTTAGCTGGAATATTTTGCTAGCTGGCGCTGAAATGGCCTTT
GAAATTGAAAATGATTTATTTCTTCCTGCAAGGCGTCTCACTCCCCTTTCTAATAAAGCTATTGCTTTACTCATTACTTA
TCGATGTGTTGAAGCTTTTGTAAAAAATGAAATGCCTTTAACTGATCGAGCTTTATCCCATGAATTAGGCATGTCACTTA
ATCACCTACAACTTGTTTTGGAGGCTTTACAGAGCGATCGCATTTTATCTGCAATCTCTTTTCATGATAAAACAATTGGT
TATCAACCGGCGCGAGCAGTGGAAAGTATTACAACGAAAAAAGTTTGCGATGCCATAGACAAGAGTGAAAGGTTAATGGC
CTCAGTACGCCCTTCCCCTCAAATGGATAGGATTAATAATTTTTTAAAATTGATTGATGAATCTATAGAAAACGCTTCTG
ATAACCAATCACTTTATACCTATGTTTCTCAAAAGGCTGATATGAATTAA

Upstream 100 bases:

>100_bases
AAAATTTATTTCTCCTTCTTTTTTTAAAAGGTGTTTTCGCGTTTTAGTTAATACCTGTAAAGGATTTATTGATGATGATT
GTTATGCTAAAGCTTCTGCT

Downstream 100 bases:

>100_bases
ATCCAATCTTGATGTATAGATTAAACTTTTAATTTTACTAATTTACGGTTATGAATAAGTTTTCAATTTGTACTACATAA
TATGAAGTTGATTTTAAATT

Product: putative RNase BN, tRNA processing enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MTFYTLLSVVPVLAVLFGIAKGFGFEKALESELNQQFLEQKELVEKVIEFAYTWLKTVQGGVIAGIGTLTLLWTVFGLLN
NIEMALNAIWKTRHTRPYSRKISDYLAAMLVAPLFLVTSSSINVFINTQITQTAHNNIIVEALSPFLFYLLKLFPYFLGW
LLFTFVYLFMPNTKVYLRSALIAGIVAGTAFQIWQWIYIKFQIGVASYGAIYGSFAALPLFLIWLQFSWNILLAGAEMAF
EIENDLFLPARRLTPLSNKAIALLITYRCVEAFVKNEMPLTDRALSHELGMSLNHLQLVLEALQSDRILSAISFHDKTIG
YQPARAVESITTKKVCDAIDKSERLMASVRPSPQMDRINNFLKLIDESIENASDNQSLYTYVSQKADMN

Sequences:

>Translated_389_residues
MTFYTLLSVVPVLAVLFGIAKGFGFEKALESELNQQFLEQKELVEKVIEFAYTWLKTVQGGVIAGIGTLTLLWTVFGLLN
NIEMALNAIWKTRHTRPYSRKISDYLAAMLVAPLFLVTSSSINVFINTQITQTAHNNIIVEALSPFLFYLLKLFPYFLGW
LLFTFVYLFMPNTKVYLRSALIAGIVAGTAFQIWQWIYIKFQIGVASYGAIYGSFAALPLFLIWLQFSWNILLAGAEMAF
EIENDLFLPARRLTPLSNKAIALLITYRCVEAFVKNEMPLTDRALSHELGMSLNHLQLVLEALQSDRILSAISFHDKTIG
YQPARAVESITTKKVCDAIDKSERLMASVRPSPQMDRINNFLKLIDESIENASDNQSLYTYVSQKADMN
>Mature_388_residues
TFYTLLSVVPVLAVLFGIAKGFGFEKALESELNQQFLEQKELVEKVIEFAYTWLKTVQGGVIAGIGTLTLLWTVFGLLNN
IEMALNAIWKTRHTRPYSRKISDYLAAMLVAPLFLVTSSSINVFINTQITQTAHNNIIVEALSPFLFYLLKLFPYFLGWL
LFTFVYLFMPNTKVYLRSALIAGIVAGTAFQIWQWIYIKFQIGVASYGAIYGSFAALPLFLIWLQFSWNILLAGAEMAFE
IENDLFLPARRLTPLSNKAIALLITYRCVEAFVKNEMPLTDRALSHELGMSLNHLQLVLEALQSDRILSAISFHDKTIGY
QPARAVESITTKKVCDAIDKSERLMASVRPSPQMDRINNFLKLIDESIENASDNQSLYTYVSQKADMN

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0761 family [H]

Homologues:

Organism=Escherichia coli, GI1790319, Length=243, Percent_Identity=25.1028806584362, Blast_Score=85, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 43995; Mature: 43864

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFYTLLSVVPVLAVLFGIAKGFGFEKALESELNQQFLEQKELVEKVIEFAYTWLKTVQG
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GVIAGIGTLTLLWTVFGLLNNIEMALNAIWKTRHTRPYSRKISDYLAAMLVAPLFLVTSS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
SINVFINTQITQTAHNNIIVEALSPFLFYLLKLFPYFLGWLLFTFVYLFMPNTKVYLRSA
CCEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LIAGIVAGTAFQIWQWIYIKFQIGVASYGAIYGSFAALPLFLIWLQFSWNILLAGAEMAF
HHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHEE
EIENDLFLPARRLTPLSNKAIALLITYRCVEAFVKNEMPLTDRALSHELGMSLNHLQLVL
EECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHH
EALQSDRILSAISFHDKTIGYQPARAVESITTKKVCDAIDKSERLMASVRPSPQMDRINN
HHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
FLKLIDESIENASDNQSLYTYVSQKADMN
HHHHHHHHHHCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
TFYTLLSVVPVLAVLFGIAKGFGFEKALESELNQQFLEQKELVEKVIEFAYTWLKTVQG
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GVIAGIGTLTLLWTVFGLLNNIEMALNAIWKTRHTRPYSRKISDYLAAMLVAPLFLVTSS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
SINVFINTQITQTAHNNIIVEALSPFLFYLLKLFPYFLGWLLFTFVYLFMPNTKVYLRSA
CCEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LIAGIVAGTAFQIWQWIYIKFQIGVASYGAIYGSFAALPLFLIWLQFSWNILLAGAEMAF
HHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHEE
EIENDLFLPARRLTPLSNKAIALLITYRCVEAFVKNEMPLTDRALSHELGMSLNHLQLVL
EECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHH
EALQSDRILSAISFHDKTIGYQPARAVESITTKKVCDAIDKSERLMASVRPSPQMDRINN
HHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
FLKLIDESIENASDNQSLYTYVSQKADMN
HHHHHHHHHHCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA