| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446495
Identifier: 46446495
GI number: 46446495
Start: 1041428
End: 1042282
Strand: Direct
Name: 46446495
Synonym: pc0861
Alternate gene names: NA
Gene position: 1041428-1042282 (Clockwise)
Preceding gene: 46446494
Following gene: 46446496
Centisome position: 43.13
GC content: 39.06
Gene sequence:
>855_bases ATGGCATATTCTCTTCCAAGCGAGCATGAAAGCAGCGTACAAATTCAAGGAGTTGAAATCTTTTTAGGATTTCCTGATGA ATTTAAGTTTGAATGGATTGGTCAAAGAGATGTTATGGAACAGTTACTTGCTGCTTGGTTAGTGATTGATAAAAATGATA TTCCACTTAATCCCCGTTTGATTGGTAAACCAGGGGTTGGTAAAACAACTTTGGCATATGCTGCAGCAAAAAAAATCAAC AGGCCTGTTTATATTTTCCAATGTACAATGGACACCCGCCCAGAAGATTTATTAATTACTCCTGTTGTTGATCAAGGTGG GGGGATAAGATATGTAGCTTCGGCTCTTGTAACAGCCATGATTCGAGGAGGTGTCTGTATTCTAGACGAGGCGAATCGAA TGAGTGAAAAGTCATGGGCTTCTTTAGCCCCTCTTTTAGATACACGTCGCTATATCGAGTCCATAGTTGCCGGTTTAAAG GTTTCAGCTCATCCAGAATTTCGTATTTGCGTGACAATGAACGATGATGCTTCAACATTTGAAATTCCAGAATATATCCA TAGCCGCCTTCAACCACAAATCTATCTCGATTTTCCTGAAGCAGAAGAAGAACGCCGGATACTTCGAGAAAATCTTCCCT TCGTTGATGAATACATCATGGAATACGTGGTCAATTTCCTACAAAAAGCTCATACAAGCCGTGAAAATTATACGATCCGA GACGGAATTAACATTGCTCGTTATGCTGCTAAACGAATTAAAAGCTTAAATGGTAATAGTGGGAATATTGAAAATTTATT GCGTGAGGCTATTTTAATGACTCTGGGAGATGAAGCTTTAATATACGTGCTTTAG
Upstream 100 bases:
>100_bases CTAAAGCTGGTCTAATTTACGGTTCTCAAAAAGCCGCGACACCTTGAGAATTACAAGATCAAATTTTTTATCATTTACCT AATTAATTATAGGATTAAAA
Downstream 100 bases:
>100_bases AGGTCTTATGCTCACAAACGATTTATTTTATCTTCAAAAAGGGCATATTTACGCTGTTCCTATTATTCATTATAATATGG AAATGGCTACGCAAGTTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: AAA Family ATPase; Regulatory Protein; ATPase; ATPase AAA Family
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MAYSLPSEHESSVQIQGVEIFLGFPDEFKFEWIGQRDVMEQLLAAWLVIDKNDIPLNPRLIGKPGVGKTTLAYAAAKKIN RPVYIFQCTMDTRPEDLLITPVVDQGGGIRYVASALVTAMIRGGVCILDEANRMSEKSWASLAPLLDTRRYIESIVAGLK VSAHPEFRICVTMNDDASTFEIPEYIHSRLQPQIYLDFPEAEEERRILRENLPFVDEYIMEYVVNFLQKAHTSRENYTIR DGINIARYAAKRIKSLNGNSGNIENLLREAILMTLGDEALIYVL
Sequences:
>Translated_284_residues MAYSLPSEHESSVQIQGVEIFLGFPDEFKFEWIGQRDVMEQLLAAWLVIDKNDIPLNPRLIGKPGVGKTTLAYAAAKKIN RPVYIFQCTMDTRPEDLLITPVVDQGGGIRYVASALVTAMIRGGVCILDEANRMSEKSWASLAPLLDTRRYIESIVAGLK VSAHPEFRICVTMNDDASTFEIPEYIHSRLQPQIYLDFPEAEEERRILRENLPFVDEYIMEYVVNFLQKAHTSRENYTIR DGINIARYAAKRIKSLNGNSGNIENLLREAILMTLGDEALIYVL >Mature_283_residues AYSLPSEHESSVQIQGVEIFLGFPDEFKFEWIGQRDVMEQLLAAWLVIDKNDIPLNPRLIGKPGVGKTTLAYAAAKKINR PVYIFQCTMDTRPEDLLITPVVDQGGGIRYVASALVTAMIRGGVCILDEANRMSEKSWASLAPLLDTRRYIESIVAGLKV SAHPEFRICVTMNDDASTFEIPEYIHSRLQPQIYLDFPEAEEERRILRENLPFVDEYIMEYVVNFLQKAHTSRENYTIRD GINIARYAAKRIKSLNGNSGNIENLLREAILMTLGDEALIYVL
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32188; Mature: 32057
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYSLPSEHESSVQIQGVEIFLGFPDEFKFEWIGQRDVMEQLLAAWLVIDKNDIPLNPRL CCCCCCCCCCCCEEEEEEEEEEECCCCCCEEECCCHHHHHHHHHHHEEECCCCCCCCCEE IGKPGVGKTTLAYAAAKKINRPVYIFQCTMDTRPEDLLITPVVDQGGGIRYVASALVTAM ECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHH IRGGVCILDEANRMSEKSWASLAPLLDTRRYIESIVAGLKVSAHPEFRICVTMNDDASTF HHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCEEEEEEECCCCCCE EIPEYIHSRLQPQIYLDFPEAEEERRILRENLPFVDEYIMEYVVNFLQKAHTSRENYTIR ECHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEC DGINIARYAAKRIKSLNGNSGNIENLLREAILMTLGDEALIYVL CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEC >Mature Secondary Structure AYSLPSEHESSVQIQGVEIFLGFPDEFKFEWIGQRDVMEQLLAAWLVIDKNDIPLNPRL CCCCCCCCCCCEEEEEEEEEEECCCCCCEEECCCHHHHHHHHHHHEEECCCCCCCCCEE IGKPGVGKTTLAYAAAKKINRPVYIFQCTMDTRPEDLLITPVVDQGGGIRYVASALVTAM ECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHH IRGGVCILDEANRMSEKSWASLAPLLDTRRYIESIVAGLKVSAHPEFRICVTMNDDASTF HHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCEEEEEEECCCCCCE EIPEYIHSRLQPQIYLDFPEAEEERRILRENLPFVDEYIMEYVVNFLQKAHTSRENYTIR ECHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEC DGINIARYAAKRIKSLNGNSGNIENLLREAILMTLGDEALIYVL CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA