| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446488
Identifier: 46446488
GI number: 46446488
Start: 1036717
End: 1036971
Strand: Reverse
Name: 46446488
Synonym: pc0854
Alternate gene names: NA
Gene position: 1036971-1036717 (Counterclockwise)
Preceding gene: 46446489
Following gene: 46446484
Centisome position: 42.95
GC content: 31.76
Gene sequence:
>255_bases ATGGCGTCAAAGCTAGAAGAAGCTCAGTCCATTCTCAATAATATACTAAGTGAATGGGATCATTTCTCAACGCCTCTCCA AAATATCAAAGAAGAAGAGTTAGAAAAAGATTTATTTTTTCAAATTGATTTTCTTTCTCAACTCGATAAGGTGAAAGCAA GGATCTCTTTTCAAATGCAGCAATTAGAAAAACATTTAGAAGAAATGAAAGAGGTAAAAAAAACTCTCTTCCAAAGAACA GCTTCAACAATTTAA
Upstream 100 bases:
>100_bases CAATCCAACTGTGGAAAAAGAGTTTAGCCGAGTGAAGAGCAGCTAAAAGAAGTTCTCTTTTTACCAAAAAAAGGGGGATT AAAATTTAGAAGGAGGATCT
Downstream 100 bases:
>100_bases TGCTTTTAAAGAAGAAGCCGAGAAAACTTTAAAGCATCTTAAACCTAAACTAGAGATTGCAAACGAATCTTACGAAGAAA TCGCAGAAGAAGTACTCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MASKLEEAQSILNNILSEWDHFSTPLQNIKEEELEKDLFFQIDFLSQLDKVKARISFQMQQLEKHLEEMKEVKKTLFQRT ASTI
Sequences:
>Translated_84_residues MASKLEEAQSILNNILSEWDHFSTPLQNIKEEELEKDLFFQIDFLSQLDKVKARISFQMQQLEKHLEEMKEVKKTLFQRT ASTI >Mature_83_residues ASKLEEAQSILNNILSEWDHFSTPLQNIKEEELEKDLFFQIDFLSQLDKVKARISFQMQQLEKHLEEMKEVKKTLFQRTA STI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9987; Mature: 9855
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASKLEEAQSILNNILSEWDHFSTPLQNIKEEELEKDLFFQIDFLSQLDKVKARISFQMQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLEKHLEEMKEVKKTLFQRTASTI HHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ASKLEEAQSILNNILSEWDHFSTPLQNIKEEELEKDLFFQIDFLSQLDKVKARISFQMQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLEKHLEEMKEVKKTLFQRTASTI HHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA