Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446484

Identifier: 46446484

GI number: 46446484

Start: 1032500

End: 1033246

Strand: Reverse

Name: 46446484

Synonym: pc0850

Alternate gene names: NA

Gene position: 1033246-1032500 (Counterclockwise)

Preceding gene: 46446488

Following gene: 46446482

Centisome position: 42.79

GC content: 41.23

Gene sequence:

>747_bases
ATGAAACAAAACTTATCCATACTCGAGCAAGGGGATATTTACTTCTTTTATCGTTCGCGTGTCCAAACAAAAAAAGCTCA
TCGCCCAGATGATATTCAGAGGCTTTATTTCATCCTAAAAGGAAAGCAAAGTCCTCATTATAGGCTCATCATCGTAGGTA
AAAAACAGTTGCCTTCTTATGATGAAAGCCCAATCGAATTTGCTTTTGTAGATACTGTTTCTAAAAGCTTCAAAGAATTA
ATTTCAACATTGCAAGAGCAGCATTATGAAACTAAGACACGCGGCGAAAGAGAGCTTCCTGCAGCCCGCCTCCTTGCAGA
AGGAAAATATGTTCTTCTTAACGATGGATCAAACACTTATTTAGCCTATCAACTAGACCGGCCTCAAAAATTGGGCCCGC
CTCAAAAACAGTTCAACTTGGCAAATGAGGGCAACTGGGTTATCTCTATAAAGAATCCCAAAATTCCCACTGAAAAAGGA
CTTTCTCCCCAGCAAAAGGCCGAATTTCCTAAAGAGCTCTTAGAGCAATTTCAAAACCGCAAATTCATCCCCTTAGCTTC
TCCAGATTATCTGGGCTACCCAGGTGCAGAGTTACTCCTGATTGGAGAGAAGTCTTCACCGGAAGAAAAATGGGGCAACA
CGATTAAAGAATGGTTTATCTCCTTTCCTCACCAGAGTATGAATGAGATGCTTGAAATAGAAAAAAGCTCAATTCCAACT
CAGCCGCTCTCCGACGTGAGGGAATAA

Upstream 100 bases:

>100_bases
TAGCAAACTTTTCCTCGATTCATATAGATTGCGTGCTTTAATACAATAATAAAAGAGAAAATGATAAAATCTTAAGAGAC
AATAAAGAAGGAGGAGAGTT

Downstream 100 bases:

>100_bases
GAGGAGATCACTAAGGATGAAATAATCGCTCTTGTATTAGAGAAATTAGATTGGATGCAGCGTGAAAAAATTTGGCCAAA
CGGCTTGCGCTATCTTTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MKQNLSILEQGDIYFFYRSRVQTKKAHRPDDIQRLYFILKGKQSPHYRLIIVGKKQLPSYDESPIEFAFVDTVSKSFKEL
ISTLQEQHYETKTRGERELPAARLLAEGKYVLLNDGSNTYLAYQLDRPQKLGPPQKQFNLANEGNWVISIKNPKIPTEKG
LSPQQKAEFPKELLEQFQNRKFIPLASPDYLGYPGAELLLIGEKSSPEEKWGNTIKEWFISFPHQSMNEMLEIEKSSIPT
QPLSDVRE

Sequences:

>Translated_248_residues
MKQNLSILEQGDIYFFYRSRVQTKKAHRPDDIQRLYFILKGKQSPHYRLIIVGKKQLPSYDESPIEFAFVDTVSKSFKEL
ISTLQEQHYETKTRGERELPAARLLAEGKYVLLNDGSNTYLAYQLDRPQKLGPPQKQFNLANEGNWVISIKNPKIPTEKG
LSPQQKAEFPKELLEQFQNRKFIPLASPDYLGYPGAELLLIGEKSSPEEKWGNTIKEWFISFPHQSMNEMLEIEKSSIPT
QPLSDVRE
>Mature_248_residues
MKQNLSILEQGDIYFFYRSRVQTKKAHRPDDIQRLYFILKGKQSPHYRLIIVGKKQLPSYDESPIEFAFVDTVSKSFKEL
ISTLQEQHYETKTRGERELPAARLLAEGKYVLLNDGSNTYLAYQLDRPQKLGPPQKQFNLANEGNWVISIKNPKIPTEKG
LSPQQKAEFPKELLEQFQNRKFIPLASPDYLGYPGAELLLIGEKSSPEEKWGNTIKEWFISFPHQSMNEMLEIEKSSIPT
QPLSDVRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28734; Mature: 28734

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQNLSILEQGDIYFFYRSRVQTKKAHRPDDIQRLYFILKGKQSPHYRLIIVGKKQLPSY
CCCCCCEEECCCEEEEEECHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCC
DESPIEFAFVDTVSKSFKELISTLQEQHYETKTRGERELPAARLLAEGKYVLLNDGSNTY
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEEECCCCEE
LAYQLDRPQKLGPPQKQFNLANEGNWVISIKNPKIPTEKGLSPQQKAEFPKELLEQFQNR
EEEEECCCCCCCCCHHHCCCCCCCCEEEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHCC
KFIPLASPDYLGYPGAELLLIGEKSSPEEKWGNTIKEWFISFPHQSMNEMLEIEKSSIPT
CCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
QPLSDVRE
CCHHHHCC
>Mature Secondary Structure
MKQNLSILEQGDIYFFYRSRVQTKKAHRPDDIQRLYFILKGKQSPHYRLIIVGKKQLPSY
CCCCCCEEECCCEEEEEECHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCC
DESPIEFAFVDTVSKSFKELISTLQEQHYETKTRGERELPAARLLAEGKYVLLNDGSNTY
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEEECCCCEE
LAYQLDRPQKLGPPQKQFNLANEGNWVISIKNPKIPTEKGLSPQQKAEFPKELLEQFQNR
EEEEECCCCCCCCCHHHCCCCCCCCEEEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHCC
KFIPLASPDYLGYPGAELLLIGEKSSPEEKWGNTIKEWFISFPHQSMNEMLEIEKSSIPT
CCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
QPLSDVRE
CCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA