The gene/protein map for NC_005861 is currently unavailable.
Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

Click here to switch to the map view.

The map label for this gene is 46446476

Identifier: 46446476

GI number: 46446476

Start: 1025830

End: 1026273

Strand: Direct

Name: 46446476

Synonym: pc0842

Alternate gene names: NA

Gene position: 1025830-1026273 (Clockwise)

Preceding gene: 46446475

Following gene: 46446477

Centisome position: 42.49

GC content: 41.44

Gene sequence:

>444_bases
ATGACACCAACATCATCAATACCTGCAGTAGCAGCCACTGCTACACAGTCAGAAGAAATGAACCCAAACCAAAAAGTCTT
TGTGGATAAAGCAACCCAAACTGTCTCGCGTGTAGTCATTGAAGTGCTAAAGACTGTAACTGAATCTGGCACGATGAAAT
GGCCTGAATTTGTCGCTACCCATATAGATCTCAAGCAGCAGGCCCTGAGTGAAATGGACGAAAGAACTAGCAAATTCTTT
GTGAAGATGATGGATGGCATTAATCCTGCAGTAGATGATGTCCCAAGATTAAAGATGTCCTTCCAAGTTTTTGGAATGGT
TGTCCAGGACCCACAAATCGGCAAAAAGCTAGTGGAAGGTATTGCTTTACCTCATATAAAAACTATGATTGTTGAGCTTG
ATGTGATTAAGCCGTCGATCGTTGATGACGTTATTAACTCTTAA

Upstream 100 bases:

>100_bases
AAATATAACTAAATACATAAATATATAAAAACTTATTTACAAATTAACGATTAAATGCAATACAATATAATTGCCCTTTT
AAAATTAAAGGAGATATTAT

Downstream 100 bases:

>100_bases
AATACTATGATTTTACGGGATATCAGATGTCGAGTAGGAGGAGCCTGATGGCTCCATCCTCCTAAAGCGCCATGCATACG
GTCCATACACGGCTTCTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MTPTSSIPAVAATATQSEEMNPNQKVFVDKATQTVSRVVIEVLKTVTESGTMKWPEFVATHIDLKQQALSEMDERTSKFF
VKMMDGINPAVDDVPRLKMSFQVFGMVVQDPQIGKKLVEGIALPHIKTMIVELDVIKPSIVDDVINS

Sequences:

>Translated_147_residues
MTPTSSIPAVAATATQSEEMNPNQKVFVDKATQTVSRVVIEVLKTVTESGTMKWPEFVATHIDLKQQALSEMDERTSKFF
VKMMDGINPAVDDVPRLKMSFQVFGMVVQDPQIGKKLVEGIALPHIKTMIVELDVIKPSIVDDVINS
>Mature_146_residues
TPTSSIPAVAATATQSEEMNPNQKVFVDKATQTVSRVVIEVLKTVTESGTMKWPEFVATHIDLKQQALSEMDERTSKFFV
KMMDGINPAVDDVPRLKMSFQVFGMVVQDPQIGKKLVEGIALPHIKTMIVELDVIKPSIVDDVINS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16246; Mature: 16115

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPTSSIPAVAATATQSEEMNPNQKVFVDKATQTVSRVVIEVLKTVTESGTMKWPEFVAT
CCCCCCCCCHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
HIDLKQQALSEMDERTSKFFVKMMDGINPAVDDVPRLKMSFQVFGMVVQDPQIGKKLVEG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
IALPHIKTMIVELDVIKPSIVDDVINS
HCCCHHHHHHHHHHHHCHHHHHHHHCC
>Mature Secondary Structure 
TPTSSIPAVAATATQSEEMNPNQKVFVDKATQTVSRVVIEVLKTVTESGTMKWPEFVAT
CCCCCCCCHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
HIDLKQQALSEMDERTSKFFVKMMDGINPAVDDVPRLKMSFQVFGMVVQDPQIGKKLVEG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
IALPHIKTMIVELDVIKPSIVDDVINS
HCCCHHHHHHHHHHHHCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA