Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446477

Identifier: 46446477

GI number: 46446477

Start: 1027059

End: 1028222

Strand: Direct

Name: 46446477

Synonym: pc0843

Alternate gene names: NA

Gene position: 1027059-1028222 (Clockwise)

Preceding gene: 46446476

Following gene: 46446478

Centisome position: 42.54

GC content: 34.97

Gene sequence:

>1164_bases
ATGTCCTTAATTCGCTGCATTTTTTTTGTTTTTTTTATTTTAATATCACAAAGCTCATTTGGGTGTGATTTTCACGATTT
TGACTCTTACCAATCGAGATTAACAGCTAAAGAAATCGAATGGAAAATAAAAACTTACTTAGAAAAAAATGAAGCGATTA
AAAGATTTTATCGCCTTACTCCTCAAGTTCTTTATATTGGTGATTTAGATCATCAACAAATAGACTACATTTTAAAATTA
AATACGAATTCACCGATTCTTCCTAATAAGCATAGCAAATACAATGGTCTGAAGAATATAAGGATCGCAATAGATCCAGG
GCATTTTGGAGGATCGTTTGCTGAGTTGGAAGAACGCTATGTAGCTATTCCTGCAGAGATGACAAAAAACAATCAGCCTA
TTTGTTTTCATGAAGGAGACCTCACCTATTTGACGGCTCTTGAGCTACAGCGCTTGCTGGAGAACGAGGGCGCTGTGGTT
CTACTTACGCGTTCTGGGATAGGGCAGGGAGCAATCAAAGAAGACTTTTTTGAATGGATAAAAACACATTCTGACCTTAT
CCAGAATGTTTCCTCCCTATCTCAAGTTTTTCGTAATTATTATAACAAAGAAGACTTGAAAGAGCGTGCTAAAATAATCA
ATGAATTTTCTCCCGATGTTACAATTGTTATTCATTATAATTCTCATTTAACTGATGAGGAAAAAAAGAACAAAAGTCTT
CTTACTAAAACTAACTACAACCTAGCATTTATTCCAGGTGCTTTTGGCGCAGACGAGTTAAATACCATTAGAGATCGTTA
TGAATTTTTGCGCTTAATTGTTACCAATCAAATTAATGAATCGCTTAAATTAAGCGAGTATGTTACTGGACAGTTTATCA
GACAGTTGGGTATCCCTCTCATCTCTGAATATGAAAAAACATCATATATAGATAGCGCATGTTTAATTCAAAAACCTGGT
ATTTATAGTCGCAATCTAGCTTTAACACGCCTTGTCCATAGCCCTGTGTGTTATGGTGAAACACTCGTCCAAAATAACCA
AGATGAAATTTATAAACTGTCAGAAGCTGACACTCCTGTTGAGAATATCCCTTGTCCCAAAAGAGTTAAAGCGGTTGCTC
AGGCTTATTATGAAGGAATCAAGGAGTATTTTAAAAATAGATAA

Upstream 100 bases:

>100_bases
AAAGAATGGGGCAGCTAGACGTATTCAGGACTTTTGATTGGTCTAAATTTAATATTCATCTACCATTTATCTTAATGAAA
AACTAAAAAGAGTAATAAAA

Downstream 100 bases:

>100_bases
TACAATCTGCTCTGGATTTAATTAATTAAAAAAATTATGAAAGATGTAAGCGAATTGCTTGCCAAGCGTCTAAAAAGGCT
AGGGGTACCTTTTTCTTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MSLIRCIFFVFFILISQSSFGCDFHDFDSYQSRLTAKEIEWKIKTYLEKNEAIKRFYRLTPQVLYIGDLDHQQIDYILKL
NTNSPILPNKHSKYNGLKNIRIAIDPGHFGGSFAELEERYVAIPAEMTKNNQPICFHEGDLTYLTALELQRLLENEGAVV
LLTRSGIGQGAIKEDFFEWIKTHSDLIQNVSSLSQVFRNYYNKEDLKERAKIINEFSPDVTIVIHYNSHLTDEEKKNKSL
LTKTNYNLAFIPGAFGADELNTIRDRYEFLRLIVTNQINESLKLSEYVTGQFIRQLGIPLISEYEKTSYIDSACLIQKPG
IYSRNLALTRLVHSPVCYGETLVQNNQDEIYKLSEADTPVENIPCPKRVKAVAQAYYEGIKEYFKNR

Sequences:

>Translated_387_residues
MSLIRCIFFVFFILISQSSFGCDFHDFDSYQSRLTAKEIEWKIKTYLEKNEAIKRFYRLTPQVLYIGDLDHQQIDYILKL
NTNSPILPNKHSKYNGLKNIRIAIDPGHFGGSFAELEERYVAIPAEMTKNNQPICFHEGDLTYLTALELQRLLENEGAVV
LLTRSGIGQGAIKEDFFEWIKTHSDLIQNVSSLSQVFRNYYNKEDLKERAKIINEFSPDVTIVIHYNSHLTDEEKKNKSL
LTKTNYNLAFIPGAFGADELNTIRDRYEFLRLIVTNQINESLKLSEYVTGQFIRQLGIPLISEYEKTSYIDSACLIQKPG
IYSRNLALTRLVHSPVCYGETLVQNNQDEIYKLSEADTPVENIPCPKRVKAVAQAYYEGIKEYFKNR
>Mature_386_residues
SLIRCIFFVFFILISQSSFGCDFHDFDSYQSRLTAKEIEWKIKTYLEKNEAIKRFYRLTPQVLYIGDLDHQQIDYILKLN
TNSPILPNKHSKYNGLKNIRIAIDPGHFGGSFAELEERYVAIPAEMTKNNQPICFHEGDLTYLTALELQRLLENEGAVVL
LTRSGIGQGAIKEDFFEWIKTHSDLIQNVSSLSQVFRNYYNKEDLKERAKIINEFSPDVTIVIHYNSHLTDEEKKNKSLL
TKTNYNLAFIPGAFGADELNTIRDRYEFLRLIVTNQINESLKLSEYVTGQFIRQLGIPLISEYEKTSYIDSACLIQKPGI
YSRNLALTRLVHSPVCYGETLVQNNQDEIYKLSEADTPVENIPCPKRVKAVAQAYYEGIKEYFKNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44752; Mature: 44620

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLIRCIFFVFFILISQSSFGCDFHDFDSYQSRLTAKEIEWKIKTYLEKNEAIKRFYRLT
CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PQVLYIGDLDHQQIDYILKLNTNSPILPNKHSKYNGLKNIRIAIDPGHFGGSFAELEERY
CCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHE
VAIPAEMTKNNQPICFHEGDLTYLTALELQRLLENEGAVVLLTRSGIGQGAIKEDFFEWI
EECCHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHH
KTHSDLIQNVSSLSQVFRNYYNKEDLKERAKIINEFSPDVTIVIHYNSHLTDEEKKNKSL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHCCCE
LTKTNYNLAFIPGAFGADELNTIRDRYEFLRLIVTNQINESLKLSEYVTGQFIRQLGIPL
EEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHH
ISEYEKTSYIDSACLIQKPGIYSRNLALTRLVHSPVCYGETLVQNNQDEIYKLSEADTPV
HHHHHHHHHCCCHHEEECCCCCCCCHHHHHHHHCCCCCCHHHHCCCHHHEEEECCCCCCH
ENIPCPKRVKAVAQAYYEGIKEYFKNR
HCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLIRCIFFVFFILISQSSFGCDFHDFDSYQSRLTAKEIEWKIKTYLEKNEAIKRFYRLT
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PQVLYIGDLDHQQIDYILKLNTNSPILPNKHSKYNGLKNIRIAIDPGHFGGSFAELEERY
CCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHE
VAIPAEMTKNNQPICFHEGDLTYLTALELQRLLENEGAVVLLTRSGIGQGAIKEDFFEWI
EECCHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHH
KTHSDLIQNVSSLSQVFRNYYNKEDLKERAKIINEFSPDVTIVIHYNSHLTDEEKKNKSL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHCCCE
LTKTNYNLAFIPGAFGADELNTIRDRYEFLRLIVTNQINESLKLSEYVTGQFIRQLGIPL
EEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHH
ISEYEKTSYIDSACLIQKPGIYSRNLALTRLVHSPVCYGETLVQNNQDEIYKLSEADTPV
HHHHHHHHHCCCHHEEECCCCCCCCHHHHHHHHCCCCCCHHHHCCCHHHEEEECCCCCCH
ENIPCPKRVKAVAQAYYEGIKEYFKNR
HCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA