Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446463

Identifier: 46446463

GI number: 46446463

Start: 1014121

End: 1015431

Strand: Reverse

Name: 46446463

Synonym: pc0829

Alternate gene names: NA

Gene position: 1015431-1014121 (Counterclockwise)

Preceding gene: 46446465

Following gene: 46446459

Centisome position: 42.06

GC content: 34.32

Gene sequence:

>1311_bases
ATGAATGAATTACCTTTTTTTACAACTATTTGTTATGATAAAAATCCAGAATTTATTGGAAAGCGTCTGCTCGAAAAGGT
CGACGCATATTTCTATCTAGGAGGCAAAAAAGCGTCAGTTATTCCAGGACATACTAAAGGTAATGTCGAAGGGGTAAAAT
TTATAAATAGTTCTTCTTCCTACTTAATTACTAGTCTAAAAGTGGCTTCGTACTGCACCATTCTAATTCCAGCAATCATG
CTAGCCGCCAAAATGTTTTTGAGGTCTATTTATAAATTTTACCTTGTCAATCCAGAAACACCAATTGACAATCAAGAATT
ATTATCGGTCAATCAAAAGCAAATTATCGAATCATTCTGGAAAGAACATATTGCCTCCTTTAAAGTCTGCCATGGAACAA
CTTCCCTACTTCTTAAACATTTCACAGAATATGGAATAAGTTCAACCTATCCCCCAGCTCTCCATGACATGATCACTAAA
GTTAGAGCGGTTTGGAAAAATCATGAATACGATATTCTACCACGTTCAGGCTATTTCAAAAACTTCGAAAGAAGATATGA
TGACGCACATCTAAAACAACAAATTGCTGTTTCGTTTACTGCGGATCCTTTTAGGCAAAAGGAATACACAGTAGGAGCAA
GAGGATATGGCGGAGAATGGATTAGAGAATTAAATCAATTTATCTATGAAGCTAAGCAGGCAAATAGAAAAGATCTCCTT
ACCTCTGAAGAGAAACAAATCGTCATGGAAATGCAGTCTTTAATAGAAGTTATGCAGCGTATTGCACCTATGAAGGTTAA
AGTGCCATATTATATGATATCTAGACAGAAAGAATTTTGTTCATTTCAAGAATTTGAAAGCAGAGTGAAAAGTGAGTGTT
TAGAATGGCAAAGCCCGGAAAAACTCTCTGCATATCTACATACTGTGTCACTTCCTCAACTAAATGACCAAAAGAAGATA
ATAGAAAATAAATATGAGATAACTGTGTATAAAACAATACACCCGAAACATCTGGAATTTGAACTCATTGATTCTACAAC
CGCTTTCAATTATCCAATGCTAGATTTTAATAAGCCTGAAGAACTATCATCATCGCAAACCGGTAAACTTCGCATTCGGC
TCGATACATTATGTAGTGAATTAGAAGAATACCAAGACTCAATATTTGAATGTACGCCGACAGACCGTCAAACATACATT
GTTACAAGAAAAGAAAGATGGTTAAACGAAAAAGAGAAAAAATCTGTCGAATTATCTAAGAAAAAATTTGCTGCACATAA
ATTATGGTTACAAAAATTTAATTTGAGTTAA

Upstream 100 bases:

>100_bases
TGGATTAAAAAATTTATTTAATTTTCTATATATTGCAAAATAACTTATATTTATATACAATTTTTTCAACTAAATTAATA
TAATATATTAGATTAATATT

Downstream 100 bases:

>100_bases
CTTTAAAAGAATTTTTATCATCCTTACTAAACCTTCTGAACCAGTTAATCTAGCAAATATTTTTCCTAAAATAATACCTT
TTGGTAGAATATAGAATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MNELPFFTTICYDKNPEFIGKRLLEKVDAYFYLGGKKASVIPGHTKGNVEGVKFINSSSSYLITSLKVASYCTILIPAIM
LAAKMFLRSIYKFYLVNPETPIDNQELLSVNQKQIIESFWKEHIASFKVCHGTTSLLLKHFTEYGISSTYPPALHDMITK
VRAVWKNHEYDILPRSGYFKNFERRYDDAHLKQQIAVSFTADPFRQKEYTVGARGYGGEWIRELNQFIYEAKQANRKDLL
TSEEKQIVMEMQSLIEVMQRIAPMKVKVPYYMISRQKEFCSFQEFESRVKSECLEWQSPEKLSAYLHTVSLPQLNDQKKI
IENKYEITVYKTIHPKHLEFELIDSTTAFNYPMLDFNKPEELSSSQTGKLRIRLDTLCSELEEYQDSIFECTPTDRQTYI
VTRKERWLNEKEKKSVELSKKKFAAHKLWLQKFNLS

Sequences:

>Translated_436_residues
MNELPFFTTICYDKNPEFIGKRLLEKVDAYFYLGGKKASVIPGHTKGNVEGVKFINSSSSYLITSLKVASYCTILIPAIM
LAAKMFLRSIYKFYLVNPETPIDNQELLSVNQKQIIESFWKEHIASFKVCHGTTSLLLKHFTEYGISSTYPPALHDMITK
VRAVWKNHEYDILPRSGYFKNFERRYDDAHLKQQIAVSFTADPFRQKEYTVGARGYGGEWIRELNQFIYEAKQANRKDLL
TSEEKQIVMEMQSLIEVMQRIAPMKVKVPYYMISRQKEFCSFQEFESRVKSECLEWQSPEKLSAYLHTVSLPQLNDQKKI
IENKYEITVYKTIHPKHLEFELIDSTTAFNYPMLDFNKPEELSSSQTGKLRIRLDTLCSELEEYQDSIFECTPTDRQTYI
VTRKERWLNEKEKKSVELSKKKFAAHKLWLQKFNLS
>Mature_436_residues
MNELPFFTTICYDKNPEFIGKRLLEKVDAYFYLGGKKASVIPGHTKGNVEGVKFINSSSSYLITSLKVASYCTILIPAIM
LAAKMFLRSIYKFYLVNPETPIDNQELLSVNQKQIIESFWKEHIASFKVCHGTTSLLLKHFTEYGISSTYPPALHDMITK
VRAVWKNHEYDILPRSGYFKNFERRYDDAHLKQQIAVSFTADPFRQKEYTVGARGYGGEWIRELNQFIYEAKQANRKDLL
TSEEKQIVMEMQSLIEVMQRIAPMKVKVPYYMISRQKEFCSFQEFESRVKSECLEWQSPEKLSAYLHTVSLPQLNDQKKI
IENKYEITVYKTIHPKHLEFELIDSTTAFNYPMLDFNKPEELSSSQTGKLRIRLDTLCSELEEYQDSIFECTPTDRQTYI
VTRKERWLNEKEKKSVELSKKKFAAHKLWLQKFNLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51123; Mature: 51123

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNELPFFTTICYDKNPEFIGKRLLEKVDAYFYLGGKKASVIPGHTKGNVEGVKFINSSSS
CCCCCEEEEEEECCCHHHHHHHHHHHHHHEEEECCCCCEECCCCCCCCCCCEEEECCCCC
YLITSLKVASYCTILIPAIMLAAKMFLRSIYKFYLVNPETPIDNQELLSVNQKQIIESFW
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHCCCHHHHHHHHH
KEHIASFKVCHGTTSLLLKHFTEYGISSTYPPALHDMITKVRAVWKNHEYDILPRSGYFK
HHHHHCEEHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCHH
NFERRYDDAHLKQQIAVSFTADPFRQKEYTVGARGYGGEWIRELNQFIYEAKQANRKDLL
HHHHHCCHHHHHHHHHEEECCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCHHHCC
TSEEKQIVMEMQSLIEVMQRIAPMKVKVPYYMISRQKEFCSFQEFESRVKSECLEWQSPE
CCHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCH
KLSAYLHTVSLPQLNDQKKIIENKYEITVYKTIHPKHLEFELIDSTTAFNYPMLDFNKPE
HHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCH
ELSSSQTGKLRIRLDTLCSELEEYQDSIFECTPTDRQTYIVTRKERWLNEKEKKSVELSK
HCCCCCCCEEEEEHHHHHHHHHHHHHHHEECCCCCCEEEEEECHHHHCCHHHHHHHHHHH
KKFAAHKLWLQKFNLS
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNELPFFTTICYDKNPEFIGKRLLEKVDAYFYLGGKKASVIPGHTKGNVEGVKFINSSSS
CCCCCEEEEEEECCCHHHHHHHHHHHHHHEEEECCCCCEECCCCCCCCCCCEEEECCCCC
YLITSLKVASYCTILIPAIMLAAKMFLRSIYKFYLVNPETPIDNQELLSVNQKQIIESFW
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHCCCHHHHHHHHH
KEHIASFKVCHGTTSLLLKHFTEYGISSTYPPALHDMITKVRAVWKNHEYDILPRSGYFK
HHHHHCEEHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCHH
NFERRYDDAHLKQQIAVSFTADPFRQKEYTVGARGYGGEWIRELNQFIYEAKQANRKDLL
HHHHHCCHHHHHHHHHEEECCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCHHHCC
TSEEKQIVMEMQSLIEVMQRIAPMKVKVPYYMISRQKEFCSFQEFESRVKSECLEWQSPE
CCHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCH
KLSAYLHTVSLPQLNDQKKIIENKYEITVYKTIHPKHLEFELIDSTTAFNYPMLDFNKPE
HHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCH
ELSSSQTGKLRIRLDTLCSELEEYQDSIFECTPTDRQTYIVTRKERWLNEKEKKSVELSK
HCCCCCCCEEEEEHHHHHHHHHHHHHHHEECCCCCCEEEEEECHHHHCCHHHHHHHHHHH
KKFAAHKLWLQKFNLS
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA