| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446378
Identifier: 46446378
GI number: 46446378
Start: 920237
End: 920452
Strand: Reverse
Name: 46446378
Synonym: pc0744
Alternate gene names: NA
Gene position: 920452-920237 (Counterclockwise)
Preceding gene: 46446379
Following gene: 46446376
Centisome position: 38.12
GC content: 40.28
Gene sequence:
>216_bases TTGTTTCTCCCAATTTCTTTCCAACTAAGTCGGTGTTGCATCGAAGGAATGACTTCATCATACGCTGAGAATTTAGTTTG TATAAAAAACGGTTTTTTTAAGTTTTCTGGCAATTTTCCCATCAGACATTCGGCCTCTTTTCGCGTTCGCTTTCGGCCGT ACATGGTTAAAACTTGCCGCGTAGCAGAGTGCAAAACAAGCCATAATCATTGTTGA
Upstream 100 bases:
>100_bases CATACCAATAGGGTTAGTTAACTTCTTCGAGAAGAAGAGGGGTTTTCTCACAAATCGAGAGTATCTTTGTCTAAGTTGTT ATTAAATTTTTCAATAGAGC
Downstream 100 bases:
>100_bases TTATCCTCATTTCCCCATAGCTCCATTACTCTCATCTAACTCGATAACAGCGACTTGAATCTTCTCTGCACTCGTTACAG TTACATTCAGGCTTTCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 71
Protein sequence:
>71_residues MFLPISFQLSRCCIEGMTSSYAENLVCIKNGFFKFSGNFPIRHSASFRVRFRPYMVKTCRVAECKTSHNHC
Sequences:
>Translated_71_residues MFLPISFQLSRCCIEGMTSSYAENLVCIKNGFFKFSGNFPIRHSASFRVRFRPYMVKTCRVAECKTSHNHC >Mature_71_residues MFLPISFQLSRCCIEGMTSSYAENLVCIKNGFFKFSGNFPIRHSASFRVRFRPYMVKTCRVAECKTSHNHC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8232; Mature: 8232
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 12.7 %Cys+Met (Translated Protein) 8.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 12.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLPISFQLSRCCIEGMTSSYAENLVCIKNGFFKFSGNFPIRHSASFRVRFRPYMVKTCR CCCCCCHHHHHHHHHHHHHHHHCCEEEEECCEEEEECCCCEECCCEEEEEECCEEEEEEE VAECKTSHNHC EECCCCCCCCC >Mature Secondary Structure MFLPISFQLSRCCIEGMTSSYAENLVCIKNGFFKFSGNFPIRHSASFRVRFRPYMVKTCR CCCCCCHHHHHHHHHHHHHHHHCCEEEEECCEEEEECCCCEECCCEEEEEECCEEEEEEE VAECKTSHNHC EECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA