| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is malQ [H]
Identifier: 46446379
GI number: 46446379
Start: 920708
End: 922378
Strand: Reverse
Name: malQ [H]
Synonym: pc0745
Alternate gene names: 46446379
Gene position: 922378-920708 (Counterclockwise)
Preceding gene: 46446380
Following gene: 46446378
Centisome position: 38.2
GC content: 39.26
Gene sequence:
>1671_bases TTGGTCCGATGCTCTCAATCAAGGAAATGTTCCGTATATTACAGAAATTACCAATACTCCTCCTGCACCTCCATTTGGTT ATCAAAGATGATAGATCCTACTTTCTTACTTCATTCTCTTGCGGCTAAACAGTGGGAGCGAATCGGTATCAAGCACCATC ATGGAATCAATGTTCCTTTATTTAGTGTTCATTCCTCTCAATCATGCGGAATTGGGGAATTTACAGACCTTTTTCTTTTA ATCGATTGGTGTAAGTCGATCAATTTTGATTTAATTCAGCTCCTCCCTTTGAATGATAGCGGTCTTGGAACCAGTCCCTA CAGTGCCCTATCAGCCTTTGCTTTAAGTCCCCTCTATTTAGGGTTACATGCTTTACCACATTTAGAAGAATTTCCCTCTT TGCATGATGAATTAAAAGCTATTCCTAAATTATCTAACCATCAACGCGTTGACTATAAGCTTGTGCGTGAAAATAAAGAA CGTTTTTTACACCATTATTATGAACAAGCCGGTTCTTTGATTTTAAATAGCCAAGCTTACCAAGCATTTGTTCAAAACAA TGCCTGGTTAAAGGGATATGCTGTTTTTAAAACTTTAAAGTCTCAATATCAATGGTCGAATTGGGAAAGTTGGCCCATTG TTGATCAATCTCCCACGCCAGAATTGTTAGAAAAAGTATATGCCAAGCATCAATCCGAAGTCGATTTTCACTGCCTCATT CAATATCTTTGTGATCAACAGCTTAAATCTGTGAAGGAATATGCCGATCGACATGGCGTTTATCTCATGGGTGATATTCC TATTTTGATTGATCGAGATAGCGCTGATGTTTGGTTACATAGATCTCTATTTGATTTAGAATTTTCGGCCGGAGCTCCTC CTGATATGTACAGTAGTGAAGGGCAAAATTGGGGCTTCCCAATTTACAATTGGGAAGCCCTCGCTCAGGAAAATTACCGT TGGTGGATAGATCGTTTAAATTGGTCTTGTCGCTATTATCATATTTATCGTATCGACCATATTATTGGTTTTTTCCGCAT TTGGTCTATTCGTCGCAGTTTAACGAGTCGACAAGGAGAATTTATTCCTTCTGATGAAGCAACTTGGGTCGATCATGGAC AACGCATTATGTGTGTTATGCTTAGAGAATGTGAAATGCTTCCTATCGGAGAAGACCTTGGTGCAGTCCCTGATCGGGTC AGAGAATGTTTAAGCGCACTTGGCATTTGTGGAACCCGTGTAATGCGTTGGGAACGGCTTTGGAAAGATAATGGCCGTTT TCTTCTCCCACAAGAATATCCAGAACATAGCATGACAACTGTTTCAACTCATGACAGCGAAACCTTACAACAGTGGTGGC AATCTTTTCCTTTAGAAGCTCAAGTCTTCGCTCAACTTAAGGGCTGGTCTTACCACCCTTATTTAAATCGTGAATACCAA AAAGAAATTTTATGGGACAGCCATCACACAAGCAGTTTATTTCATATTAATCTTTTACAAGAATATTTGGCTCTTATTCC TGGTTTGACTTGGCCTCACCTAGAAGATGAGCGGATTAATATCCCAGGAATTATCTCTGAAAGAAATTGGAGCTATCGAT TCAAACCAAGTTTAGAAGAACTCACCTCTCATCCAGCATTAACCTACCTTATGCAACAACTTATTATTTAA
Upstream 100 bases:
>100_bases AATCCAGTAATTTAATTTTATATACTTTAATTGATCCTTATCAGTTAGACCAAAACAAAATTGAAAGCATTCTTTCACCT TTTGTTGCCAAAGCGAAAAT
Downstream 100 bases:
>100_bases TAAGTTGTTAAGTTGATTTCTCTAACCTTAAACCCATGTATTTATACATATATTAGAATGTTAAATAATGATCAATAAAA GTGCTTTTTTAGCTTTAGGT
Product: 4-alpha-glucanotransferase
Products: NA
Alternate protein names: Amylomaltase; Disproportionating enzyme; D-enzyme [H]
Number of amino acids: Translated: 556; Mature: 556
Protein sequence:
>556_residues MVRCSQSRKCSVYYRNYQYSSCTSIWLSKMIDPTFLLHSLAAKQWERIGIKHHHGINVPLFSVHSSQSCGIGEFTDLFLL IDWCKSINFDLIQLLPLNDSGLGTSPYSALSAFALSPLYLGLHALPHLEEFPSLHDELKAIPKLSNHQRVDYKLVRENKE RFLHHYYEQAGSLILNSQAYQAFVQNNAWLKGYAVFKTLKSQYQWSNWESWPIVDQSPTPELLEKVYAKHQSEVDFHCLI QYLCDQQLKSVKEYADRHGVYLMGDIPILIDRDSADVWLHRSLFDLEFSAGAPPDMYSSEGQNWGFPIYNWEALAQENYR WWIDRLNWSCRYYHIYRIDHIIGFFRIWSIRRSLTSRQGEFIPSDEATWVDHGQRIMCVMLRECEMLPIGEDLGAVPDRV RECLSALGICGTRVMRWERLWKDNGRFLLPQEYPEHSMTTVSTHDSETLQQWWQSFPLEAQVFAQLKGWSYHPYLNREYQ KEILWDSHHTSSLFHINLLQEYLALIPGLTWPHLEDERINIPGIISERNWSYRFKPSLEELTSHPALTYLMQQLII
Sequences:
>Translated_556_residues MVRCSQSRKCSVYYRNYQYSSCTSIWLSKMIDPTFLLHSLAAKQWERIGIKHHHGINVPLFSVHSSQSCGIGEFTDLFLL IDWCKSINFDLIQLLPLNDSGLGTSPYSALSAFALSPLYLGLHALPHLEEFPSLHDELKAIPKLSNHQRVDYKLVRENKE RFLHHYYEQAGSLILNSQAYQAFVQNNAWLKGYAVFKTLKSQYQWSNWESWPIVDQSPTPELLEKVYAKHQSEVDFHCLI QYLCDQQLKSVKEYADRHGVYLMGDIPILIDRDSADVWLHRSLFDLEFSAGAPPDMYSSEGQNWGFPIYNWEALAQENYR WWIDRLNWSCRYYHIYRIDHIIGFFRIWSIRRSLTSRQGEFIPSDEATWVDHGQRIMCVMLRECEMLPIGEDLGAVPDRV RECLSALGICGTRVMRWERLWKDNGRFLLPQEYPEHSMTTVSTHDSETLQQWWQSFPLEAQVFAQLKGWSYHPYLNREYQ KEILWDSHHTSSLFHINLLQEYLALIPGLTWPHLEDERINIPGIISERNWSYRFKPSLEELTSHPALTYLMQQLII >Mature_556_residues MVRCSQSRKCSVYYRNYQYSSCTSIWLSKMIDPTFLLHSLAAKQWERIGIKHHHGINVPLFSVHSSQSCGIGEFTDLFLL IDWCKSINFDLIQLLPLNDSGLGTSPYSALSAFALSPLYLGLHALPHLEEFPSLHDELKAIPKLSNHQRVDYKLVRENKE RFLHHYYEQAGSLILNSQAYQAFVQNNAWLKGYAVFKTLKSQYQWSNWESWPIVDQSPTPELLEKVYAKHQSEVDFHCLI QYLCDQQLKSVKEYADRHGVYLMGDIPILIDRDSADVWLHRSLFDLEFSAGAPPDMYSSEGQNWGFPIYNWEALAQENYR WWIDRLNWSCRYYHIYRIDHIIGFFRIWSIRRSLTSRQGEFIPSDEATWVDHGQRIMCVMLRECEMLPIGEDLGAVPDRV RECLSALGICGTRVMRWERLWKDNGRFLLPQEYPEHSMTTVSTHDSETLQQWWQSFPLEAQVFAQLKGWSYHPYLNREYQ KEILWDSHHTSSLFHINLLQEYLALIPGLTWPHLEDERINIPGIISERNWSYRFKPSLEELTSHPALTYLMQQLII
Specific function: Unknown
COG id: COG1640
COG function: function code G; 4-alpha-glucanotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the disproportionating enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1789821, Length=558, Percent_Identity=27.0609318996416, Blast_Score=139, Evalue=5e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003385 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF02446 Glyco_hydro_77 [H]
EC number: =2.4.1.25 [H]
Molecular weight: Translated: 65438; Mature: 65438
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRCSQSRKCSVYYRNYQYSSCTSIWLSKMIDPTFLLHSLAAKQWERIGIKHHHGINVPL CCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEE FSVHSSQSCGIGEFTDLFLLIDWCKSINFDLIQLLPLNDSGLGTSPYSALSAFALSPLYL EEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH GLHALPHLEEFPSLHDELKAIPKLSNHQRVDYKLVRENKERFLHHYYEQAGSLILNSQAY HHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECHHHH QAFVQNNAWLKGYAVFKTLKSQYQWSNWESWPIVDQSPTPELLEKVYAKHQSEVDFHCLI HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHH QYLCDQQLKSVKEYADRHGVYLMGDIPILIDRDSADVWLHRSLFDLEFSAGAPPDMYSSE HHHHHHHHHHHHHHHHHCCEEEEECEEEEEECCCCCEEEEHHHEEEEECCCCCCCCCCCC GQNWGFPIYNWEALAQENYRWWIDRLNWSCRYYHIYRIDHIIGFFRIWSIRRSLTSRQGE CCCCCCCCCCHHHHHHCCCCEEHHCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCC FIPSDEATWVDHGQRIMCVMLRECEMLPIGEDLGAVPDRVRECLSALGICGTRVMRWERL CCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH WKDNGRFLLPQEYPEHSMTTVSTHDSETLQQWWQSFPLEAQVFAQLKGWSYHPYLNREYQ HHCCCCEECCCCCCCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHH KEILWDSHHTSSLFHINLLQEYLALIPGLTWPHLEDERINIPGIISERNWSYRFKPSLEE HHHHCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCEEECCCHHH LTSHPALTYLMQQLII HHCCHHHHHHHHHHCC >Mature Secondary Structure MVRCSQSRKCSVYYRNYQYSSCTSIWLSKMIDPTFLLHSLAAKQWERIGIKHHHGINVPL CCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEE FSVHSSQSCGIGEFTDLFLLIDWCKSINFDLIQLLPLNDSGLGTSPYSALSAFALSPLYL EEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH GLHALPHLEEFPSLHDELKAIPKLSNHQRVDYKLVRENKERFLHHYYEQAGSLILNSQAY HHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECHHHH QAFVQNNAWLKGYAVFKTLKSQYQWSNWESWPIVDQSPTPELLEKVYAKHQSEVDFHCLI HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHH QYLCDQQLKSVKEYADRHGVYLMGDIPILIDRDSADVWLHRSLFDLEFSAGAPPDMYSSE HHHHHHHHHHHHHHHHHCCEEEEECEEEEEECCCCCEEEEHHHEEEEECCCCCCCCCCCC GQNWGFPIYNWEALAQENYRWWIDRLNWSCRYYHIYRIDHIIGFFRIWSIRRSLTSRQGE CCCCCCCCCCHHHHHHCCCCEEHHCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCC FIPSDEATWVDHGQRIMCVMLRECEMLPIGEDLGAVPDRVRECLSALGICGTRVMRWERL CCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH WKDNGRFLLPQEYPEHSMTTVSTHDSETLQQWWQSFPLEAQVFAQLKGWSYHPYLNREYQ HHCCCCEECCCCCCCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHH KEILWDSHHTSSLFHINLLQEYLALIPGLTWPHLEDERINIPGIISERNWSYRFKPSLEE HHHHCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCEEECCCHHH LTSHPALTYLMQQLII HHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]