| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446368
Identifier: 46446368
GI number: 46446368
Start: 894351
End: 897197
Strand: Reverse
Name: 46446368
Synonym: pc0734
Alternate gene names: NA
Gene position: 897197-894351 (Counterclockwise)
Preceding gene: 46446370
Following gene: 46446367
Centisome position: 37.16
GC content: 33.93
Gene sequence:
>2847_bases ATGCTGCTTTCCTCTAGCATAGATTCTAATATTAATTCTAAGATTTTTGTAGATAACAAACAAAATCCCTCATTCCCTTC TCCTTTAGCTATAAAAATTGGGTTAGAAATATTCAAATATTTGGAATCGCTAGATCAAAAGCAAACTAGGCTAGTGTGTA GGAAATGGAAGCAGCTAATCGATAAAGTACATATTGTTGAAAGATATAATATAAGGCTTATGAATGGGGCCGAGGTGAGA CAAGAAGCTACTAATTGCTTAAGCAAATATAAAAAATTAAAAATAGAACAGCGCTTTTTTTTAATGATTGTCAAACTTTC GAAAGATTGCATAAAAATAAAGGTCGCAGCTGCAAATGCCTTGATGATTTTAAAAAAAACCAATTTTTCTTTTGTCGGCT CTGATTTTAGAGGGATTCAAGCCCCTGGTGTTAGGCTTGCCCGGGCAAATTTGAATAAAGCTAATTTCTCGGGAGCGAAT CTAGAAGGGGCGGATTTTACTGGCTGCTCCTTAGAAAACGTTATTCTTGATGGCGCGGAGCTTAAAGACGTCCAGTTTGG CCAGCTCCCTTATTTAAATCATCTAAGCAATATACTCGCTATGGCTGTGTCTCCTGATGGCAAGCATTTGGCTTCCGTTG ATTGGGACAGTTTCTATATTTGGAATTTGGAAACTTTTGAAGCTCAAACGCAAATATTGGCGACAAGAGTTAATCCAAAG TCGGCGTTCCCTAAGTACAATTTTCTCCAGTTTTTTCAGAATGGCCAATTTCTTTTCAGAGCATCGTGCATGGAAAAAGA TAAATTGCTTCGTAAAAGGGATGGGAAAATTGAAATATGGAAAACTAATCCTCTAACAATGATCAATTCACTGCTTATTG AAAATATTGAATTTTTTTCCTTATTGGCTCTTACTCAAGATGAAAAAATGCTTATTACTGTAGGCATAAAAGACCAGTTT TCTCCTATGCCAAAAATAGAAATTTGCCTTTGGCAAATAAATTTTAATACCCTCCATATTCCTCAACTTCAACCAAAGCC AGTCAAAAAAAAAATAATAATGGGCTTCTCGGTAATTGCTAGCCGCTATGCCCCTAAAAATTCTATTATCGCTATTCTTG TAATAGAACATGCGAGAGAATGCTTAAGAGGAGAATGTGTCAAATTTTATACCCTCCCTGATTTAGAAGAAGTAAAACAA GGTTTGGTATTTCAGCTATCTGAAAAGAAGAAAATAGCGCCAGGCAATATAATGTTCTATGATATGATATTTACTCCGCA AGAAAGCCATTTTGTCATAATAAATAGGGCTATAGCTGGGGAAAGTAAAAGTGAAGTACATAGTTGGAGTACAAAAAATA ATCAAAAAAAATTTTTATTTTTTGAAGAAGGTACTATAACCCACCTCCAATTTTTGTCAGATAACTCACAAATGGCCTAC TTTATAACTAGCGGGCGTCATGGTATAACCTTTTTTCGCATACGTGACAAAGATTTCAAATTAAAGTTCAGCGAACGGTT AAGCTTAAAGAATTCTGATGATTGCGATAATTATAAAGATACACTACACTTTATTTCTAATGGTCAGTTTGTCTTCCAGT CTAAAATAAAACAAATTTCTATTGCTTCTTTAAAAGCTTTTGTGGGCAAAAAAGAATTTCCTCTATCTCTTCGTGATATG TATTTTTCCCCAGATGAGCAAAAAGTCTTTCTCTGGAGTTATGAACACCGAAATACTTACTGGCCTAATCTAGAAAACAC CTACATTCTTCATAAAGTTGAAAATAAGCTCTATACCTATCAAACTTTTAATGGGAAAAAACTTAGAAACAAAAAATTAC CGAAGCCTTTTTCTGCACCGAGATGGTTCGAGGATTGGGGTTGCCGTCTCTCTTCTAATGCCCAATATTGTATTCGAACA TGCCCCTCCGAAAGCAATGGCAAAAACAAAATTACTATTTCTCAAGTTGAAAATGAAAAAGTACAAGCTTCATATGCAGG ATCTTTTTTAACTTATTCATTATCAAAAGATAATCGTTATCTTGTCTTTATTTACCAAAACCAATTCAAGCTAATTGAAA TAGATTTCGAAAAACATAATCAATTAGTGGACATGGATTCCACGCAACAAAAACTTGCTGTTTCTCTTCCTTGTCTTTTG GGCAAAGAAAAAATTAAATATACTCTTTCTGATCATGTTTTTCCCGTCACAACTCTTGCTTTAAGCAATATTGAAACAGG ACAAATCAGCATATGGGAGATTAATTGGGAAGCCAAACAAGTACAAGAGGTGTTTCAGTGTTTAACGAAATTGTTTTCCA CTGAATTTTGCTTGTATGGTCAATCCAACTTTTATTTTCAACAATCCAAGTTCTATTTTCAAGAGAATGAACAAGCTCTT GTTGTATGGGACAAAAAAACGCATAGTAAGCAAACCATCAAGTCAAAAACTCAGTTCATTGATTTTGTTACATCCCACGA TGGGGTCTGGATGGTAACTATTGAAAAAATAGTAATTTCAATGCATAAGGGAAAATTTTTCGAAGATAAATCCAGGTTTT GCTTAGTAAATTTAGATCAAAGGAAAAGACTTGATCACTTCATCCTTCCTTTTGGTCGTTCAATAATCCGACTTTCACCA CAAGGTAAGTTTTTAATTGTTAACCATATGAGTGATTTTGAAGAATTAAGTATATGGAAAATAAAGAAAGGAAAATTTCA ACTTTTATGGAAGACTCCTCATTATTTAAACGTAAGGGGATTGAGTTTAAAGAATACACAAAATTTGGATGTAAAAAATA CTTTATTGCTTTATGGGCTTAAAAATCGGGTTTCAGAAGAACTCTAA
Upstream 100 bases:
>100_bases ATCAAATAAAAAAAATGAATTGCTTTATTTTAGTATAGTTTACTACCCCACAATAGTTGAATAAATCTTTTCCCATCCCT CTTTTTAGGAGAATTATACG
Downstream 100 bases:
>100_bases TAGAGGAAATCATAAAGTATATCATTAGTTAATTCCCTTTAGAGACCTGTTTCTTTTTCTATGGTTAGCATTAAGTTAAA GAATGAATGCCCTTTCTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 948; Mature: 948
Protein sequence:
>948_residues MLLSSSIDSNINSKIFVDNKQNPSFPSPLAIKIGLEIFKYLESLDQKQTRLVCRKWKQLIDKVHIVERYNIRLMNGAEVR QEATNCLSKYKKLKIEQRFFLMIVKLSKDCIKIKVAAANALMILKKTNFSFVGSDFRGIQAPGVRLARANLNKANFSGAN LEGADFTGCSLENVILDGAELKDVQFGQLPYLNHLSNILAMAVSPDGKHLASVDWDSFYIWNLETFEAQTQILATRVNPK SAFPKYNFLQFFQNGQFLFRASCMEKDKLLRKRDGKIEIWKTNPLTMINSLLIENIEFFSLLALTQDEKMLITVGIKDQF SPMPKIEICLWQINFNTLHIPQLQPKPVKKKIIMGFSVIASRYAPKNSIIAILVIEHARECLRGECVKFYTLPDLEEVKQ GLVFQLSEKKKIAPGNIMFYDMIFTPQESHFVIINRAIAGESKSEVHSWSTKNNQKKFLFFEEGTITHLQFLSDNSQMAY FITSGRHGITFFRIRDKDFKLKFSERLSLKNSDDCDNYKDTLHFISNGQFVFQSKIKQISIASLKAFVGKKEFPLSLRDM YFSPDEQKVFLWSYEHRNTYWPNLENTYILHKVENKLYTYQTFNGKKLRNKKLPKPFSAPRWFEDWGCRLSSNAQYCIRT CPSESNGKNKITISQVENEKVQASYAGSFLTYSLSKDNRYLVFIYQNQFKLIEIDFEKHNQLVDMDSTQQKLAVSLPCLL GKEKIKYTLSDHVFPVTTLALSNIETGQISIWEINWEAKQVQEVFQCLTKLFSTEFCLYGQSNFYFQQSKFYFQENEQAL VVWDKKTHSKQTIKSKTQFIDFVTSHDGVWMVTIEKIVISMHKGKFFEDKSRFCLVNLDQRKRLDHFILPFGRSIIRLSP QGKFLIVNHMSDFEELSIWKIKKGKFQLLWKTPHYLNVRGLSLKNTQNLDVKNTLLLYGLKNRVSEEL
Sequences:
>Translated_948_residues MLLSSSIDSNINSKIFVDNKQNPSFPSPLAIKIGLEIFKYLESLDQKQTRLVCRKWKQLIDKVHIVERYNIRLMNGAEVR QEATNCLSKYKKLKIEQRFFLMIVKLSKDCIKIKVAAANALMILKKTNFSFVGSDFRGIQAPGVRLARANLNKANFSGAN LEGADFTGCSLENVILDGAELKDVQFGQLPYLNHLSNILAMAVSPDGKHLASVDWDSFYIWNLETFEAQTQILATRVNPK SAFPKYNFLQFFQNGQFLFRASCMEKDKLLRKRDGKIEIWKTNPLTMINSLLIENIEFFSLLALTQDEKMLITVGIKDQF SPMPKIEICLWQINFNTLHIPQLQPKPVKKKIIMGFSVIASRYAPKNSIIAILVIEHARECLRGECVKFYTLPDLEEVKQ GLVFQLSEKKKIAPGNIMFYDMIFTPQESHFVIINRAIAGESKSEVHSWSTKNNQKKFLFFEEGTITHLQFLSDNSQMAY FITSGRHGITFFRIRDKDFKLKFSERLSLKNSDDCDNYKDTLHFISNGQFVFQSKIKQISIASLKAFVGKKEFPLSLRDM YFSPDEQKVFLWSYEHRNTYWPNLENTYILHKVENKLYTYQTFNGKKLRNKKLPKPFSAPRWFEDWGCRLSSNAQYCIRT CPSESNGKNKITISQVENEKVQASYAGSFLTYSLSKDNRYLVFIYQNQFKLIEIDFEKHNQLVDMDSTQQKLAVSLPCLL GKEKIKYTLSDHVFPVTTLALSNIETGQISIWEINWEAKQVQEVFQCLTKLFSTEFCLYGQSNFYFQQSKFYFQENEQAL VVWDKKTHSKQTIKSKTQFIDFVTSHDGVWMVTIEKIVISMHKGKFFEDKSRFCLVNLDQRKRLDHFILPFGRSIIRLSP QGKFLIVNHMSDFEELSIWKIKKGKFQLLWKTPHYLNVRGLSLKNTQNLDVKNTLLLYGLKNRVSEEL >Mature_948_residues MLLSSSIDSNINSKIFVDNKQNPSFPSPLAIKIGLEIFKYLESLDQKQTRLVCRKWKQLIDKVHIVERYNIRLMNGAEVR QEATNCLSKYKKLKIEQRFFLMIVKLSKDCIKIKVAAANALMILKKTNFSFVGSDFRGIQAPGVRLARANLNKANFSGAN LEGADFTGCSLENVILDGAELKDVQFGQLPYLNHLSNILAMAVSPDGKHLASVDWDSFYIWNLETFEAQTQILATRVNPK SAFPKYNFLQFFQNGQFLFRASCMEKDKLLRKRDGKIEIWKTNPLTMINSLLIENIEFFSLLALTQDEKMLITVGIKDQF SPMPKIEICLWQINFNTLHIPQLQPKPVKKKIIMGFSVIASRYAPKNSIIAILVIEHARECLRGECVKFYTLPDLEEVKQ GLVFQLSEKKKIAPGNIMFYDMIFTPQESHFVIINRAIAGESKSEVHSWSTKNNQKKFLFFEEGTITHLQFLSDNSQMAY FITSGRHGITFFRIRDKDFKLKFSERLSLKNSDDCDNYKDTLHFISNGQFVFQSKIKQISIASLKAFVGKKEFPLSLRDM YFSPDEQKVFLWSYEHRNTYWPNLENTYILHKVENKLYTYQTFNGKKLRNKKLPKPFSAPRWFEDWGCRLSSNAQYCIRT CPSESNGKNKITISQVENEKVQASYAGSFLTYSLSKDNRYLVFIYQNQFKLIEIDFEKHNQLVDMDSTQQKLAVSLPCLL GKEKIKYTLSDHVFPVTTLALSNIETGQISIWEINWEAKQVQEVFQCLTKLFSTEFCLYGQSNFYFQQSKFYFQENEQAL VVWDKKTHSKQTIKSKTQFIDFVTSHDGVWMVTIEKIVISMHKGKFFEDKSRFCLVNLDQRKRLDHFILPFGRSIIRLSP QGKFLIVNHMSDFEELSIWKIKKGKFQLLWKTPHYLNVRGLSLKNTQNLDVKNTLLLYGLKNRVSEEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 110218; Mature: 110218
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: PS00014 ER_TARGET ; PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLSSSIDSNINSKIFVDNKQNPSFPSPLAIKIGLEIFKYLESLDQKQTRLVCRKWKQLI CCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH DKVHIVERYNIRLMNGAEVRQEATNCLSKYKKLKIEQRFFLMIVKLSKDCIKIKVAAANA HHEEEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCHHEEEEEEEECCCEEEEEEEECCE LMILKKTNFSFVGSDFRGIQAPGVRLARANLNKANFSGANLEGADFTGCSLENVILDGAE EEEEEECCCEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHEEECCCC LKDVQFGQLPYLNHLSNILAMAVSPDGKHLASVDWDSFYIWNLETFEAQTQILATRVNPK CCCCCCCCCCHHHHHHHHEEEEECCCCCEEEEECCCCEEEEEEEHHHCCEEEEEEECCCH SAFPKYNFLQFFQNGQFLFRASCMEKDKLLRKRDGKIEIWKTNPLTMINSLLIENIEFFS HCCCCCHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCEEE LLALTQDEKMLITVGIKDQFSPMPKIEICLWQINFNTLHIPQLQPKPVKKKIIMGFSVIA EEEECCCCEEEEEEECCCCCCCCCCEEEEEEEEECCEEECCCCCCCCCHHHHHHHHHHHH SRYAPKNSIIAILVIEHARECLRGECVKFYTLPDLEEVKQGLVFQLSEKKKIAPGNIMFY HHCCCCCCEEEEEEEHHHHHHHCCCCEEEEECCCHHHHHCCCEEEECCCCCCCCCCEEEE DMIFTPQESHFVIINRAIAGESKSEVHSWSTKNNQKKFLFFEEGTITHLQFLSDNSQMAY EEEECCCCCCEEEEEEEECCCCHHHHHCCCCCCCCEEEEEEECCCEEEEEEECCCCEEEE FITSGRHGITFFRIRDKDFKLKFSERLSLKNSDDCDNYKDTLHFISNGQFVFQSKIKQIS EEECCCCCEEEEEEECCCEEEEEHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEHHHHHHH IASLKAFVGKKEFPLSLRDMYFSPDEQKVFLWSYEHRNTYWPNLENTYILHKVENKLYTY HHHHHHHHCCCCCCCCHHHHCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCEEEE QTFNGKKLRNKKLPKPFSAPRWFEDWGCRLSSNAQYCIRTCPSESNGKNKITISQVENEK EECCCCCCCCCCCCCCCCCCCCHHHHCCEECCCCCEEEEECCCCCCCCCEEEEEECCCCE VQASYAGSFLTYSLSKDNRYLVFIYQNQFKLIEIDFEKHNQLVDMDSTQQKLAVSLPCLL EEHEECCCEEEEEECCCCEEEEEEECCCEEEEEEECCCCCCEECCCCCHHHHEEECCHHC GKEKIKYTLSDHVFPVTTLALSNIETGQISIWEINWEAKQVQEVFQCLTKLFSTEFCLYG CCCCEEEEECCCCEEEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEC QSNFYFQQSKFYFQENEQALVVWDKKTHSKQTIKSKTQFIDFVTSHDGVWMVTIEKIVIS CCCEEEEECEEEEECCCCEEEEEECCCCCHHHHHHHHHHEEEEECCCCEEEEEEHHHHHH MHKGKFFEDKSRFCLVNLDQRKRLDHFILPFGRSIIRLSPQGKFLIVNHMSDFEELSIWK HHCCCEECCCCCEEEEECHHHHCCCHHEECCCCEEEEECCCCCEEEEECCCCCCCCEEEE IKKGKFQLLWKTPHYLNVRGLSLKNTQNLDVKNTLLLYGLKNRVSEEL EECCCEEEEEECCCEEEEEEEEECCCCCCCCCCEEEEEEHHHHHCCCC >Mature Secondary Structure MLLSSSIDSNINSKIFVDNKQNPSFPSPLAIKIGLEIFKYLESLDQKQTRLVCRKWKQLI CCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH DKVHIVERYNIRLMNGAEVRQEATNCLSKYKKLKIEQRFFLMIVKLSKDCIKIKVAAANA HHEEEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCHHEEEEEEEECCCEEEEEEEECCE LMILKKTNFSFVGSDFRGIQAPGVRLARANLNKANFSGANLEGADFTGCSLENVILDGAE EEEEEECCCEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHEEECCCC LKDVQFGQLPYLNHLSNILAMAVSPDGKHLASVDWDSFYIWNLETFEAQTQILATRVNPK CCCCCCCCCCHHHHHHHHEEEEECCCCCEEEEECCCCEEEEEEEHHHCCEEEEEEECCCH SAFPKYNFLQFFQNGQFLFRASCMEKDKLLRKRDGKIEIWKTNPLTMINSLLIENIEFFS HCCCCCHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCEEE LLALTQDEKMLITVGIKDQFSPMPKIEICLWQINFNTLHIPQLQPKPVKKKIIMGFSVIA EEEECCCCEEEEEEECCCCCCCCCCEEEEEEEEECCEEECCCCCCCCCHHHHHHHHHHHH SRYAPKNSIIAILVIEHARECLRGECVKFYTLPDLEEVKQGLVFQLSEKKKIAPGNIMFY HHCCCCCCEEEEEEEHHHHHHHCCCCEEEEECCCHHHHHCCCEEEECCCCCCCCCCEEEE DMIFTPQESHFVIINRAIAGESKSEVHSWSTKNNQKKFLFFEEGTITHLQFLSDNSQMAY EEEECCCCCCEEEEEEEECCCCHHHHHCCCCCCCCEEEEEEECCCEEEEEEECCCCEEEE FITSGRHGITFFRIRDKDFKLKFSERLSLKNSDDCDNYKDTLHFISNGQFVFQSKIKQIS EEECCCCCEEEEEEECCCEEEEEHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEHHHHHHH IASLKAFVGKKEFPLSLRDMYFSPDEQKVFLWSYEHRNTYWPNLENTYILHKVENKLYTY HHHHHHHHCCCCCCCCHHHHCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCEEEE QTFNGKKLRNKKLPKPFSAPRWFEDWGCRLSSNAQYCIRTCPSESNGKNKITISQVENEK EECCCCCCCCCCCCCCCCCCCCHHHHCCEECCCCCEEEEECCCCCCCCCEEEEEECCCCE VQASYAGSFLTYSLSKDNRYLVFIYQNQFKLIEIDFEKHNQLVDMDSTQQKLAVSLPCLL EEHEECCCEEEEEECCCCEEEEEEECCCEEEEEEECCCCCCEECCCCCHHHHEEECCHHC GKEKIKYTLSDHVFPVTTLALSNIETGQISIWEINWEAKQVQEVFQCLTKLFSTEFCLYG CCCCEEEEECCCCEEEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEC QSNFYFQQSKFYFQENEQALVVWDKKTHSKQTIKSKTQFIDFVTSHDGVWMVTIEKIVIS CCCEEEEECEEEEECCCCEEEEEECCCCCHHHHHHHHHHEEEEECCCCEEEEEEHHHHHH MHKGKFFEDKSRFCLVNLDQRKRLDHFILPFGRSIIRLSPQGKFLIVNHMSDFEELSIWK HHCCCEECCCCCEEEEECHHHHCCCHHEECCCCEEEEECCCCCEEEEECCCCCCCCEEEE IKKGKFQLLWKTPHYLNVRGLSLKNTQNLDVKNTLLLYGLKNRVSEEL EECCCEEEEEECCCEEEEEEEEECCCCCCCCCCEEEEEEHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA