Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446123

Identifier: 46446123

GI number: 46446123

Start: 627151

End: 628173

Strand: Reverse

Name: 46446123

Synonym: pc0489

Alternate gene names: NA

Gene position: 628173-627151 (Counterclockwise)

Preceding gene: 46446124

Following gene: 46446122

Centisome position: 26.02

GC content: 37.73

Gene sequence:

>1023_bases
ATGAATGAAATCCATCTTTTATCTAAAGATGAACGGGAACTTTTCTTTAGAGCTACAACTGATATCAAGAACCTTCCCTT
TGAGATTATTGAGAAAGACTACTGGGTCGTATGGGTTTTGGAAAGACTATTTTCGCTTCAAAAGCTGAAGCCTCACCTCA
CCTTTAAAGGAGGCACATCCCTTTCCAAAGTATATGGATTGATAGACCGTTTTTCAGAAGATATCGATCTTTCAATCGAA
AGAGAATTTTTTGGTTTTGGTGCATCTCAGGACCCTGAAAATGCACCGTCCAAGAAAAAACAAAACGCTATTATCGATAA
TCTTTCAAAAGCTTGCTCCAATTATGTTCAAACTCAGATGCTCGCCGATCTTAAAGATTGCTTTGCTGCAAAACTCGGAA
CAATTGACGGGTGGCGTATCTTCCTTGACCAAGAAGACCCCGATGCCCAAACATTATTATTTGAATACCCAAGTGAAACC
TCAAAAGCTGGATATATTCGTCCACTTGTGAAAATCGAAATCGGTGCAAGATCAGAACACTGGCCTGTCAGCGAACATAA
AATACAGAGCTATGTTAAGGAGGCGCTAAAAGAAAAAATTCATGAATCTGAAATATTGGTTCGCGTGCTGAATGCTGAAC
GAACTTTTTGGGAAAAAGCAACAATTCTTCATCAATATGCTCATTTACCAAAAGATAAGAAGCTTCCATCACGAATCTCG
AGACATTATTATGATTTTTTCCGTTTACTAAATTCGGAAATCAAGGAGAAGGCTCTTATTGAGACCCCTCTGCTTGAAAG
AGTTGCCATCCACAAAAGTATTTACTTTGCATCAAGTTGGGCAAATTACGGAACAGCTAGGAAGGAAACCTTAAAGCTCT
TTCCCCCTACTCAAATCTTAAAAGAACTTGAGAAAGATTATGCGCTGATGAAGTCCATGTTTTTTAGAGAAACTCCAGAA
TGGGGTCTAATCCTAAAAGTAATTGGAAATTTTGAAAAAGAATTTAACAACGTTAAGAAATAA

Upstream 100 bases:

>100_bases
AATTTCTCAAAGATTCCAACGAAAAGGAAATTAAGCAAAATATGAAATTCGCTCCTGCCTGGATTAGAACCCTTGTTTTT
GAAATTATGGAGCTCAAGCC

Downstream 100 bases:

>100_bases
GGTACTAGGGCATCAGAGATATCAATAAGAAACTACCGTGGAAGATGCGCAAGCTCTCGCGAATATCTATTTTCACAAAA
TCCATTGCATTAATATTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MNEIHLLSKDERELFFRATTDIKNLPFEIIEKDYWVVWVLERLFSLQKLKPHLTFKGGTSLSKVYGLIDRFSEDIDLSIE
REFFGFGASQDPENAPSKKKQNAIIDNLSKACSNYVQTQMLADLKDCFAAKLGTIDGWRIFLDQEDPDAQTLLFEYPSET
SKAGYIRPLVKIEIGARSEHWPVSEHKIQSYVKEALKEKIHESEILVRVLNAERTFWEKATILHQYAHLPKDKKLPSRIS
RHYYDFFRLLNSEIKEKALIETPLLERVAIHKSIYFASSWANYGTARKETLKLFPPTQILKELEKDYALMKSMFFRETPE
WGLILKVIGNFEKEFNNVKK

Sequences:

>Translated_340_residues
MNEIHLLSKDERELFFRATTDIKNLPFEIIEKDYWVVWVLERLFSLQKLKPHLTFKGGTSLSKVYGLIDRFSEDIDLSIE
REFFGFGASQDPENAPSKKKQNAIIDNLSKACSNYVQTQMLADLKDCFAAKLGTIDGWRIFLDQEDPDAQTLLFEYPSET
SKAGYIRPLVKIEIGARSEHWPVSEHKIQSYVKEALKEKIHESEILVRVLNAERTFWEKATILHQYAHLPKDKKLPSRIS
RHYYDFFRLLNSEIKEKALIETPLLERVAIHKSIYFASSWANYGTARKETLKLFPPTQILKELEKDYALMKSMFFRETPE
WGLILKVIGNFEKEFNNVKK
>Mature_340_residues
MNEIHLLSKDERELFFRATTDIKNLPFEIIEKDYWVVWVLERLFSLQKLKPHLTFKGGTSLSKVYGLIDRFSEDIDLSIE
REFFGFGASQDPENAPSKKKQNAIIDNLSKACSNYVQTQMLADLKDCFAAKLGTIDGWRIFLDQEDPDAQTLLFEYPSET
SKAGYIRPLVKIEIGARSEHWPVSEHKIQSYVKEALKEKIHESEILVRVLNAERTFWEKATILHQYAHLPKDKKLPSRIS
RHYYDFFRLLNSEIKEKALIETPLLERVAIHKSIYFASSWANYGTARKETLKLFPPTQILKELEKDYALMKSMFFRETPE
WGLILKVIGNFEKEFNNVKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39776; Mature: 39776

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEIHLLSKDERELFFRATTDIKNLPFEIIEKDYWVVWVLERLFSLQKLKPHLTFKGGTS
CCCCCCCCCCCHHHEEEECCCHHHCCHHHHHCCHHHHHHHHHHHHHHHCCCCEEECCCCH
LSKVYGLIDRFSEDIDLSIEREFFGFGASQDPENAPSKKKQNAIIDNLSKACSNYVQTQM
HHHHHHHHHHHCCCCCCEEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LADLKDCFAAKLGTIDGWRIFLDQEDPDAQTLLFEYPSETSKAGYIRPLVKIEIGARSEH
HHHHHHHHHHHHCCCCCEEEEEECCCCCHHEEEEECCCCCCCCCCCCEEEEEEECCCCCC
WPVSEHKIQSYVKEALKEKIHESEILVRVLNAERTFWEKATILHQYAHLPKDKKLPSRIS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
RHYYDFFRLLNSEIKEKALIETPLLERVAIHKSIYFASSWANYGTARKETLKLFPPTQIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCHHHHH
KELEKDYALMKSMFFRETPEWGLILKVIGNFEKEFNNVKK
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNEIHLLSKDERELFFRATTDIKNLPFEIIEKDYWVVWVLERLFSLQKLKPHLTFKGGTS
CCCCCCCCCCCHHHEEEECCCHHHCCHHHHHCCHHHHHHHHHHHHHHHCCCCEEECCCCH
LSKVYGLIDRFSEDIDLSIEREFFGFGASQDPENAPSKKKQNAIIDNLSKACSNYVQTQM
HHHHHHHHHHHCCCCCCEEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LADLKDCFAAKLGTIDGWRIFLDQEDPDAQTLLFEYPSETSKAGYIRPLVKIEIGARSEH
HHHHHHHHHHHHCCCCCEEEEEECCCCCHHEEEEECCCCCCCCCCCCEEEEEEECCCCCC
WPVSEHKIQSYVKEALKEKIHESEILVRVLNAERTFWEKATILHQYAHLPKDKKLPSRIS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
RHYYDFFRLLNSEIKEKALIETPLLERVAIHKSIYFASSWANYGTARKETLKLFPPTQIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCHHHHH
KELEKDYALMKSMFFRETPEWGLILKVIGNFEKEFNNVKK
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA