| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446124
Identifier: 46446124
GI number: 46446124
Start: 628170
End: 628799
Strand: Reverse
Name: 46446124
Synonym: pc0490
Alternate gene names: NA
Gene position: 628799-628170 (Counterclockwise)
Preceding gene: 46446126
Following gene: 46446123
Centisome position: 26.04
GC content: 38.57
Gene sequence:
>630_bases GTGAAAAATGGAGAGATTATAATGGGCTCAAGTATTGAAGTGATGATCAAGAATAGAATTATCGATCACGGTCGCGGATG GTGTTTTACGCCGATGCAATTTTTAGATCTCGGTAGCGATACCTCTATTAGAAAAGCTCTCTCGCAGCTTCAAAAACAAA ATTTTATTCGCCGACTCGCTCAAGGCATTTATGATTACCCTAAGGAGCATGATGTATTAGGTGTAATCCCCCCAGATTTG AACGAGGTTGCTAAAGCAATTGCGGAAAAAAACGGAGTTCAAATTCAACCTGCTGGTGCTCATGCTGCAAATCTAGTCGG TCTTTCAACACAAGTTCCTGGTCGAATCATCTTTTTAACTGAAGGCCCTTCAAGGAAAGTTAAAATTGGTAATCAAGAAA TCATTTTTAAAAAGACCACAAAAAAAATAATGTCTTCTGCTGGAACTAGAGAAGGTCTTCTGATTCAAGCCCTAAAAAAT TTAGGGAAAGATCACATTGACCAGATAGTGCGTGCGCAAGTTTCAAAATTTCTCAAAGATTCCAACGAAAAGGAAATTAA GCAAAATATGAAATTCGCTCCTGCCTGGATTAGAACCCTTGTTTTTGAAATTATGGAGCTCAAGCCATGA
Upstream 100 bases:
>100_bases TTTTTTAATTCAGTTAGACAGCAATTTTCACAAAAAGATGCTATTTTTGTGAAATCTAACACATTCAAATTGCACGTTTT CACAAAAAGATGCTATTTTT
Downstream 100 bases:
>100_bases ATGAAATCCATCTTTTATCTAAAGATGAACGGGAACTTTTCTTTAGAGCTACAACTGATATCAAGAACCTTCCCTTTGAG ATTATTGAGAAAGACTACTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MKNGEIIMGSSIEVMIKNRIIDHGRGWCFTPMQFLDLGSDTSIRKALSQLQKQNFIRRLAQGIYDYPKEHDVLGVIPPDL NEVAKAIAEKNGVQIQPAGAHAANLVGLSTQVPGRIIFLTEGPSRKVKIGNQEIIFKKTTKKIMSSAGTREGLLIQALKN LGKDHIDQIVRAQVSKFLKDSNEKEIKQNMKFAPAWIRTLVFEIMELKP
Sequences:
>Translated_209_residues MKNGEIIMGSSIEVMIKNRIIDHGRGWCFTPMQFLDLGSDTSIRKALSQLQKQNFIRRLAQGIYDYPKEHDVLGVIPPDL NEVAKAIAEKNGVQIQPAGAHAANLVGLSTQVPGRIIFLTEGPSRKVKIGNQEIIFKKTTKKIMSSAGTREGLLIQALKN LGKDHIDQIVRAQVSKFLKDSNEKEIKQNMKFAPAWIRTLVFEIMELKP >Mature_209_residues MKNGEIIMGSSIEVMIKNRIIDHGRGWCFTPMQFLDLGSDTSIRKALSQLQKQNFIRRLAQGIYDYPKEHDVLGVIPPDL NEVAKAIAEKNGVQIQPAGAHAANLVGLSTQVPGRIIFLTEGPSRKVKIGNQEIIFKKTTKKIMSSAGTREGLLIQALKN LGKDHIDQIVRAQVSKFLKDSNEKEIKQNMKFAPAWIRTLVFEIMELKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23389; Mature: 23389
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNGEIIMGSSIEVMIKNRIIDHGRGWCFTPMQFLDLGSDTSIRKALSQLQKQNFIRRLA CCCCCEEECCCHHHHHHHHHHHCCCCCEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH QGIYDYPKEHDVLGVIPPDLNEVAKAIAEKNGVQIQPAGAHAANLVGLSTQVPGRIIFLT HHHHCCCCCCCEEEECCCCHHHHHHHHHHCCCCEEEECCCCHHHHEECCCCCCCEEEEEE EGPSRKVKIGNQEIIFKKTTKKIMSSAGTREGLLIQALKNLGKDHIDQIVRAQVSKFLKD CCCCCEEEECCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHC SNEKEIKQNMKFAPAWIRTLVFEIMELKP CCHHHHHHCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MKNGEIIMGSSIEVMIKNRIIDHGRGWCFTPMQFLDLGSDTSIRKALSQLQKQNFIRRLA CCCCCEEECCCHHHHHHHHHHHCCCCCEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH QGIYDYPKEHDVLGVIPPDLNEVAKAIAEKNGVQIQPAGAHAANLVGLSTQVPGRIIFLT HHHHCCCCCCCEEEECCCCHHHHHHHHHHCCCCEEEECCCCHHHHEECCCCCCCEEEEEE EGPSRKVKIGNQEIIFKKTTKKIMSSAGTREGLLIQALKNLGKDHIDQIVRAQVSKFLKD CCCCCEEEECCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHC SNEKEIKQNMKFAPAWIRTLVFEIMELKP CCHHHHHHCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA