| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446022
Identifier: 46446022
GI number: 46446022
Start: 518988
End: 519470
Strand: Direct
Name: 46446022
Synonym: pc0388
Alternate gene names: NA
Gene position: 518988-519470 (Clockwise)
Preceding gene: 46446021
Following gene: 46446023
Centisome position: 21.49
GC content: 36.02
Gene sequence:
>483_bases ATGTTTATTAATCAAGCAATGGCGACTTTGACGGCAATGGACTGTCGAACAAATGTGAATTCTGATTTGTTGAAAAAAAC TCTTCAAGCAGCAAATTTTGCTCTTTTGGCATCACCCATCATTCTGACTGTTACAAAGATAGGCTCTGATCGTTTAGGGC ACTTAATATGTGGAATAGTAGCCGTGCCTTTAATAGCAAAAGGATTTGTTCATTTGGCTCGCAAATATGAAGTAGGAACC CAAGCATCAGACAGTATCTATAATAACATCGGAAAATGTTTTGATATAGCAACTATCATAACACAAATTTTTAATGTAGC AATTTTATATCCATTTGCAAGAAAATATCCAGTTCAAGTTGGCTTGTCGATAGCTGCAGTTGGGGTAAATATTTGGCATT TTAGTAATGCTTATTTAGGTACAAACACTAATCAGGGGCAATCTGTTTCTAATCGGCGTCCAGTTGTTGAAGGAAATTGG TAA
Upstream 100 bases:
>100_bases TTAAAGAATTAGATTTAAATTAATTCATAAGAAATTGAATTATTTATAACCTTAAATCTATTTGAATAAGAAATAACAAA AAATTAATTAGAGGTTTATA
Downstream 100 bases:
>100_bases ATAACCCTATTAATAACAAAATGTGATCTATGGCTTAAGAAATGAATTGTATTTTTCTTTTCTTAAGCTGTTTATTTTTA GTAAATCTCAATTGAATAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MFINQAMATLTAMDCRTNVNSDLLKKTLQAANFALLASPIILTVTKIGSDRLGHLICGIVAVPLIAKGFVHLARKYEVGT QASDSIYNNIGKCFDIATIITQIFNVAILYPFARKYPVQVGLSIAAVGVNIWHFSNAYLGTNTNQGQSVSNRRPVVEGNW
Sequences:
>Translated_160_residues MFINQAMATLTAMDCRTNVNSDLLKKTLQAANFALLASPIILTVTKIGSDRLGHLICGIVAVPLIAKGFVHLARKYEVGT QASDSIYNNIGKCFDIATIITQIFNVAILYPFARKYPVQVGLSIAAVGVNIWHFSNAYLGTNTNQGQSVSNRRPVVEGNW >Mature_160_residues MFINQAMATLTAMDCRTNVNSDLLKKTLQAANFALLASPIILTVTKIGSDRLGHLICGIVAVPLIAKGFVHLARKYEVGT QASDSIYNNIGKCFDIATIITQIFNVAILYPFARKYPVQVGLSIAAVGVNIWHFSNAYLGTNTNQGQSVSNRRPVVEGNW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17399; Mature: 17399
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFINQAMATLTAMDCRTNVNSDLLKKTLQAANFALLASPIILTVTKIGSDRLGHLICGIV CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHEEECCCCHHHHHHHHHHH AVPLIAKGFVHLARKYEVGTQASDSIYNNIGKCFDIATIITQIFNVAILYPFARKYPVQV HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH GLSIAAVGVNIWHFSNAYLGTNTNQGQSVSNRRPVVEGNW CCEEEEEEEEEEEECCCEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MFINQAMATLTAMDCRTNVNSDLLKKTLQAANFALLASPIILTVTKIGSDRLGHLICGIV CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHEEECCCCHHHHHHHHHHH AVPLIAKGFVHLARKYEVGTQASDSIYNNIGKCFDIATIITQIFNVAILYPFARKYPVQV HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH GLSIAAVGVNIWHFSNAYLGTNTNQGQSVSNRRPVVEGNW CCEEEEEEEEEEEECCCEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA