| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is kefC [H]
Identifier: 46446015
GI number: 46446015
Start: 506404
End: 508083
Strand: Direct
Name: kefC [H]
Synonym: pc0381
Alternate gene names: 46446015
Gene position: 506404-508083 (Clockwise)
Preceding gene: 46446013
Following gene: 46446021
Centisome position: 20.97
GC content: 36.01
Gene sequence:
>1680_bases ATGGTTAACAGCATGGACTCTCATAATCTGAAGATTGTACTCATTTTAGCCTTTGGTTTTTCTTTAGCAGGAATTTTGGG TTATATTACTCACCGTTTAAAGCTCTCACCGATTTTGGGCTACTTACTTGCTGGATATATTATAGGTCCTTATTCCCCGG GCTTTGTTGCAGATGTCAATGTCTCTGAACAACTAGCTGAAATTGGCGTTGTTTTAATGCTCTTTGGAGTGGGTTTACAT CTAAAATGGGAAGATTTAGTCAACGTAAAAAATATTGCAATACCGGGTGCGATAGGACAAACTTTAGTCGCTGCCGCATG TGGGGCTTGGATCGTTTATGCAATTGGTTGGCCTATTGAAGTGGGAATTATTGTTGGTTTGGCTATTGGCGTGGCTAGTA CAGTTGTTCTTGTCAGAGTTTTATCTGATAATCATCTTTTAGATACGTTAGAAGGTCATGTTTCCATAGGTTGGTTAATC GTTGAAGATATTTTGACTGTTATAGTTTTGATTTTATTACCTGTTATTTCTACCTTTGCTAAAGAAGGAAATCTTCCTTT AATTGAATTATTAGAGACTTTAGGTTGGACAGTTTTTAAATTTCTCCTTTTAGCTCTAGTCATGTTCACATTTGGAAAAA AAATTGTGACTTTTATTCTTATGCATATTGCTAGGCTTAGATCACATGAGCTTTTTACACTCGCTTTGTTAGCATTAACA TTCATGATAGCAGTCGCTTCAGCACTAGTTTTTGGAACATCGATTGCATTGGGTGCATTTATCGCGGGGATGGTGATCGG GCAAACCCACGTAAAACATCAAGCAGCAGCCAACGCTCTTCCGATGAAAGATGCATTTGCAGTTATTTTCTTTTTAACTG TAGGGATGATTTTTAATCCCATGGCGATTATGGAGAATTTTACACTTTTTATAGGGATTTTAGCGATTGTTGTTGTTATT AAACCACTTGCAGCATTTTTAATTGTAGTGGTCATGCGTTATCCTGTCAAAGTTGCTTTGACAGTTGCCTTGGCACTTGC TCAAATTGGAGAGTTTTCTTTTATCTTGGGTGAAGAAGCAATTAAATTTCATCTTTTACCTGATGAAGGCTATGATATTA TTGTTGCTTGTGCTCTTATCTCTATCTCTATCAACCCTCTCTTATTTAAAGGTATTAACTTTTTACAGAATTCTATCGAA TCTGTGCAAAATACCTATAATCCTTTAGTTCCCAATGATATTCCTCCAGTTTTTCATTCTCTTCACGCAATTGTTATTGG ATTTGGGCCTTTAGGTCGAGCTATTGCGCAGACTTTAGAACAGCAAAATTTTGATGTGACTGTGATTGACCAAAATGTAG ATACAATTGCTTTCTTAAGTGATAGCCATCAACGAGCTGTTTTTGGAGATGCTACACTTCCTACCATTTTAGAAGATGCT CATATTAAAGATGCTGATTTGCTACTGATTACTGTTCCGAATTTGAATATAACTTTAAAAATTATTCAAGTCGCACAACC TCTCAATTCAGAAATGAAAATTTTGGCTCGAGCTAATTATTTAACAGACCAACAAAAGTTACAGAACTTAAATATTCAAT CAGTATGTAGTGAAGAAGAAACAAAGCAAGCGTTTATCAAAATGGTCGACCGGATTGTAAAAGAAGAACTTGAGGCTTAA
Upstream 100 bases:
>100_bases ACATTTCAATTTTAACCTAAATCAAAAAAAATTTTATGATTTAATATCCACTGTTTCTGATAAATGCTAGACGTGCTAAG TTTCGGGAAAGCAATAATGG
Downstream 100 bases:
>100_bases AACTAAGTTAATAAAGGCTTAATATTATTGTTACATAAATCCTTGTTGACGCCACGCTTCATACAAGGCGATACCGGCAG AAGTAGCAAGATTTAAACAA
Product: putative glutathione-regulated potassium-efflux system protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 559; Mature: 559
Protein sequence:
>559_residues MVNSMDSHNLKIVLILAFGFSLAGILGYITHRLKLSPILGYLLAGYIIGPYSPGFVADVNVSEQLAEIGVVLMLFGVGLH LKWEDLVNVKNIAIPGAIGQTLVAAACGAWIVYAIGWPIEVGIIVGLAIGVASTVVLVRVLSDNHLLDTLEGHVSIGWLI VEDILTVIVLILLPVISTFAKEGNLPLIELLETLGWTVFKFLLLALVMFTFGKKIVTFILMHIARLRSHELFTLALLALT FMIAVASALVFGTSIALGAFIAGMVIGQTHVKHQAAANALPMKDAFAVIFFLTVGMIFNPMAIMENFTLFIGILAIVVVI KPLAAFLIVVVMRYPVKVALTVALALAQIGEFSFILGEEAIKFHLLPDEGYDIIVACALISISINPLLFKGINFLQNSIE SVQNTYNPLVPNDIPPVFHSLHAIVIGFGPLGRAIAQTLEQQNFDVTVIDQNVDTIAFLSDSHQRAVFGDATLPTILEDA HIKDADLLLITVPNLNITLKIIQVAQPLNSEMKILARANYLTDQQKLQNLNIQSVCSEEETKQAFIKMVDRIVKEELEA
Sequences:
>Translated_559_residues MVNSMDSHNLKIVLILAFGFSLAGILGYITHRLKLSPILGYLLAGYIIGPYSPGFVADVNVSEQLAEIGVVLMLFGVGLH LKWEDLVNVKNIAIPGAIGQTLVAAACGAWIVYAIGWPIEVGIIVGLAIGVASTVVLVRVLSDNHLLDTLEGHVSIGWLI VEDILTVIVLILLPVISTFAKEGNLPLIELLETLGWTVFKFLLLALVMFTFGKKIVTFILMHIARLRSHELFTLALLALT FMIAVASALVFGTSIALGAFIAGMVIGQTHVKHQAAANALPMKDAFAVIFFLTVGMIFNPMAIMENFTLFIGILAIVVVI KPLAAFLIVVVMRYPVKVALTVALALAQIGEFSFILGEEAIKFHLLPDEGYDIIVACALISISINPLLFKGINFLQNSIE SVQNTYNPLVPNDIPPVFHSLHAIVIGFGPLGRAIAQTLEQQNFDVTVIDQNVDTIAFLSDSHQRAVFGDATLPTILEDA HIKDADLLLITVPNLNITLKIIQVAQPLNSEMKILARANYLTDQQKLQNLNIQSVCSEEETKQAFIKMVDRIVKEELEA >Mature_559_residues MVNSMDSHNLKIVLILAFGFSLAGILGYITHRLKLSPILGYLLAGYIIGPYSPGFVADVNVSEQLAEIGVVLMLFGVGLH LKWEDLVNVKNIAIPGAIGQTLVAAACGAWIVYAIGWPIEVGIIVGLAIGVASTVVLVRVLSDNHLLDTLEGHVSIGWLI VEDILTVIVLILLPVISTFAKEGNLPLIELLETLGWTVFKFLLLALVMFTFGKKIVTFILMHIARLRSHELFTLALLALT FMIAVASALVFGTSIALGAFIAGMVIGQTHVKHQAAANALPMKDAFAVIFFLTVGMIFNPMAIMENFTLFIGILAIVVVI KPLAAFLIVVVMRYPVKVALTVALALAQIGEFSFILGEEAIKFHLLPDEGYDIIVACALISISINPLLFKGINFLQNSIE SVQNTYNPLVPNDIPPVFHSLHAIVIGFGPLGRAIAQTLEQQNFDVTVIDQNVDTIAFLSDSHQRAVFGDATLPTILEDA HIKDADLLLITVPNLNITLKIIQVAQPLNSEMKILARANYLTDQQKLQNLNIQSVCSEEETKQAFIKMVDRIVKEELEA
Specific function: Unknown
COG id: COG4651
COG function: function code P; Kef-type K+ transport system, predicted NAD-binding component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=380, Percent_Identity=24.4736842105263, Blast_Score=97, Evalue=3e-20, Organism=Escherichia coli, GI1786685, Length=546, Percent_Identity=36.996336996337, Blast_Score=357, Evalue=1e-99, Organism=Escherichia coli, GI1786232, Length=557, Percent_Identity=26.5709156193896, Blast_Score=156, Evalue=3e-39, Organism=Escherichia coli, GI1789749, Length=516, Percent_Identity=25, Blast_Score=153, Evalue=2e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 60776; Mature: 60776
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: PS00214 FABP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNSMDSHNLKIVLILAFGFSLAGILGYITHRLKLSPILGYLLAGYIIGPYSPGFVADVN CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEECC VSEQLAEIGVVLMLFGVGLHLKWEDLVNVKNIAIPGAIGQTLVAAACGAWIVYAIGWPIE HHHHHHHHHHHHHHHHCCCEEEHHHHCCHHHEECCCHHHHHHHHHHHHHHHHHHCCCCHH VGIIVGLAIGVASTVVLVRVLSDNHLLDTLEGHVSIGWLIVEDILTVIVLILLPVISTFA HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH KEGNLPLIELLETLGWTVFKFLLLALVMFTFGKKIVTFILMHIARLRSHELFTLALLALT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH FMIAVASALVFGTSIALGAFIAGMVIGQTHVKHQAAANALPMKDAFAVIFFLTVGMIFNP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCH MAIMENFTLFIGILAIVVVIKPLAAFLIVVVMRYPVKVALTVALALAQIGEFSFILGEEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHEEECCCC IKFHLLPDEGYDIIVACALISISINPLLFKGINFLQNSIESVQNTYNPLVPNDIPPVFHS EEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH LHAIVIGFGPLGRAIAQTLEQQNFDVTVIDQNVDTIAFLSDSHQRAVFGDATLPTILEDA HHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCEEECCCCHHHHHHCC HIKDADLLLITVPNLNITLKIIQVAQPLNSEMKILARANYLTDQQKLQNLNIQSVCSEEE CCCCCCEEEEEECCCCEEEEEEEHHCCCCHHHHHHHHHHHHCCHHHHHCCCHHHHHCHHH TKQAFIKMVDRIVKEELEA HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVNSMDSHNLKIVLILAFGFSLAGILGYITHRLKLSPILGYLLAGYIIGPYSPGFVADVN CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEECC VSEQLAEIGVVLMLFGVGLHLKWEDLVNVKNIAIPGAIGQTLVAAACGAWIVYAIGWPIE HHHHHHHHHHHHHHHHCCCEEEHHHHCCHHHEECCCHHHHHHHHHHHHHHHHHHCCCCHH VGIIVGLAIGVASTVVLVRVLSDNHLLDTLEGHVSIGWLIVEDILTVIVLILLPVISTFA HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH KEGNLPLIELLETLGWTVFKFLLLALVMFTFGKKIVTFILMHIARLRSHELFTLALLALT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH FMIAVASALVFGTSIALGAFIAGMVIGQTHVKHQAAANALPMKDAFAVIFFLTVGMIFNP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCH MAIMENFTLFIGILAIVVVIKPLAAFLIVVVMRYPVKVALTVALALAQIGEFSFILGEEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHEEECCCC IKFHLLPDEGYDIIVACALISISINPLLFKGINFLQNSIESVQNTYNPLVPNDIPPVFHS EEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH LHAIVIGFGPLGRAIAQTLEQQNFDVTVIDQNVDTIAFLSDSHQRAVFGDATLPTILEDA HHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCEEECCCCHHHHHHCC HIKDADLLLITVPNLNITLKIIQVAQPLNSEMKILARANYLTDQQKLQNLNIQSVCSEEE CCCCCCEEEEEECCCCEEEEEEEHHCCCCHHHHHHHHHHHHCCHHHHHCCCHHHHHCHHH TKQAFIKMVDRIVKEELEA HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503; 7721718 [H]