| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is fdxC [C]
Identifier: 46446005
GI number: 46446005
Start: 498124
End: 498399
Strand: Reverse
Name: fdxC [C]
Synonym: pc0371
Alternate gene names: 46446005
Gene position: 498399-498124 (Counterclockwise)
Preceding gene: 46446006
Following gene: 46446002
Centisome position: 20.64
GC content: 33.7
Gene sequence:
>276_bases ATGCCATCTTTAATCAGTCTACGAAATAAAAAAATATATCATATTAAACAAGGATTAGAGTTATTAAAAGCTTATCAATT GAATTGTTCTCTTCCTTTCCGTTTTGGTTGTACCAAAGGGCTATGTGCTGTTTGCGCCATTAAAGTAGTTAAAGGAATGG AAAATCTTTCGAAAAAGACTCAAGAAGAAACAGCCACTTTAACAACTAAACGGTTGGACGCCAACTATCGTTTAGCTTGT CAATGTGCAATTTTTGGAGAGGTTGTCATTGATTAA
Upstream 100 bases:
>100_bases GATAAAAACATATCAAACAACCCAGAAACGGGAAAGTTCACTTCTCTTTTATCGGAAGAGTGGGATATGCAAACACCTTT GCTTGTAATCGGGTAAAATT
Downstream 100 bases:
>100_bases TGACAACCTTAAGGAATCTGCTATTGATTGGATAACATATCATAAGTAGGTTTATTCACTGGACGGTCTTTAAAATACCA ATCTGTTTGAGTCGTTGTTC
Product: putative ferredoxin [2Fe-2S] IV
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MPSLISLRNKKIYHIKQGLELLKAYQLNCSLPFRFGCTKGLCAVCAIKVVKGMENLSKKTQEETATLTTKRLDANYRLAC QCAIFGEVVID
Sequences:
>Translated_91_residues MPSLISLRNKKIYHIKQGLELLKAYQLNCSLPFRFGCTKGLCAVCAIKVVKGMENLSKKTQEETATLTTKRLDANYRLAC QCAIFGEVVID >Mature_90_residues PSLISLRNKKIYHIKQGLELLKAYQLNCSLPFRFGCTKGLCAVCAIKVVKGMENLSKKTQEETATLTTKRLDANYRLACQ CAIFGEVVID
Specific function: NADH Oxidoreductase Acting In Concert With Hcp. [C]
COG id: COG0633
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.-.-.- [C]
Molecular weight: Translated: 10183; Mature: 10052
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 6.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSLISLRNKKIYHIKQGLELLKAYQLNCSLPFRFGCTKGLCAVCAIKVVKGMENLSKKT CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QEETATLTTKRLDANYRLACQCAIFGEVVID HHHHHHHHHHHCCCCCEEEEEEEEECEEECC >Mature Secondary Structure PSLISLRNKKIYHIKQGLELLKAYQLNCSLPFRFGCTKGLCAVCAIKVVKGMENLSKKT CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QEETATLTTKRLDANYRLACQCAIFGEVVID HHHHHHHHHHHCCCCCEEEEEEEEECEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA