Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446004

Identifier: 46446004

GI number: 46446004

Start: 497138

End: 498103

Strand: Direct

Name: 46446004

Synonym: pc0370

Alternate gene names: NA

Gene position: 497138-498103 (Clockwise)

Preceding gene: 46446003

Following gene: 46446007

Centisome position: 20.59

GC content: 38.51

Gene sequence:

>966_bases
TTGGAGTGTTATATGAAGAATTCATTTTTCTTATCTTCTACTTTGTTATGTCTATTAGTTTCTACCTCTTGTCAAACTCA
TCGTCATCCTGAAGATGTCGTTTATGAAACATATGTTCATCGCTACGGAGTAGAATTGCCGGCTGAAGACTGGTCTTCTC
GTGGACAACATGGCCAAGTCTTATCTACACGACGTGATGGTGTGGTCGTTACAAAAACCTATGAATCAGGGATATTGCAT
GGAGAAGTAACTTATACATTCCCTCATCGTGAATGCATTGAAAAAAAAGAAGTTTATGATCAGGGGAATTTAATTCAAGA
AACTTACTATTATGCGAGTGGAATGCCAAAACAACAAATAGATTATCGATCAGCCGATCAATATTCTGTCATTTCTTGGT
ATGAAGGAGGAGCGCCTCAGTCCAAAGAGGAGTTTAACGAGCAAGGATTAGTTAAGGCCGATTATTATAACTTAGCCAAC
CAAATAGAATCTTCTGTGCAAGATGGGTTTGGTAAGCGAATAGTGCGGGATAGCTATGGACTCCTTCACTCAGTGGACCA
AATCCAAGATGGGCAAATGACAATGCGAACAACCTATCATCCCAACGGAGCTCCTGCAGCTTATACTCCTTATGTAAATG
GTGTCATTCAAGGAGAAAGAAAGACTTATACCATGTCTGGGGAACCAATTTCGATTGAACAATGGAAAAATAATTGCCAA
CATGGAAATACCATTGTTTTTGAAAATGGAGAAAAATATGCAGATCTTCCTTATGTGGAAGGGCGTCCACATGGTATTGA
ATATCGATATCGCAATGGGAATCAAGTTGTTCAAAAAAGAACCTGGGTTAACGGAAGAAAACATGGCCCTTGTTATAATT
ATGTAGGAACAACGACTCAAACAGATTGGTATTTTAAAGACCGTCCAGTGAATAAACCTACTTATGATATGTTATCCAAT
CAATAG

Upstream 100 bases:

>100_bases
ACAAGAAGTTGTAGAAAATGAGCATCAACGATTAAAAACAGCAGTTTCTCAAAAGTTTGCTAATGATCTTAAACAATAAT
TTGAGAAAATTCTCATTCAA

Downstream 100 bases:

>100_bases
CAGATTCCTTAAGGTTGTCATTAATCAATGACAACCTCTCCAAAAATTGCACATTGACAAGCTAAACGATAGTTGGCGTC
CAACCGTTTAGTTGTTAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MECYMKNSFFLSSTLLCLLVSTSCQTHRHPEDVVYETYVHRYGVELPAEDWSSRGQHGQVLSTRRDGVVVTKTYESGILH
GEVTYTFPHRECIEKKEVYDQGNLIQETYYYASGMPKQQIDYRSADQYSVISWYEGGAPQSKEEFNEQGLVKADYYNLAN
QIESSVQDGFGKRIVRDSYGLLHSVDQIQDGQMTMRTTYHPNGAPAAYTPYVNGVIQGERKTYTMSGEPISIEQWKNNCQ
HGNTIVFENGEKYADLPYVEGRPHGIEYRYRNGNQVVQKRTWVNGRKHGPCYNYVGTTTQTDWYFKDRPVNKPTYDMLSN
Q

Sequences:

>Translated_321_residues
MECYMKNSFFLSSTLLCLLVSTSCQTHRHPEDVVYETYVHRYGVELPAEDWSSRGQHGQVLSTRRDGVVVTKTYESGILH
GEVTYTFPHRECIEKKEVYDQGNLIQETYYYASGMPKQQIDYRSADQYSVISWYEGGAPQSKEEFNEQGLVKADYYNLAN
QIESSVQDGFGKRIVRDSYGLLHSVDQIQDGQMTMRTTYHPNGAPAAYTPYVNGVIQGERKTYTMSGEPISIEQWKNNCQ
HGNTIVFENGEKYADLPYVEGRPHGIEYRYRNGNQVVQKRTWVNGRKHGPCYNYVGTTTQTDWYFKDRPVNKPTYDMLSN
Q
>Mature_321_residues
MECYMKNSFFLSSTLLCLLVSTSCQTHRHPEDVVYETYVHRYGVELPAEDWSSRGQHGQVLSTRRDGVVVTKTYESGILH
GEVTYTFPHRECIEKKEVYDQGNLIQETYYYASGMPKQQIDYRSADQYSVISWYEGGAPQSKEEFNEQGLVKADYYNLAN
QIESSVQDGFGKRIVRDSYGLLHSVDQIQDGQMTMRTTYHPNGAPAAYTPYVNGVIQGERKTYTMSGEPISIEQWKNNCQ
HGNTIVFENGEKYADLPYVEGRPHGIEYRYRNGNQVVQKRTWVNGRKHGPCYNYVGTTTQTDWYFKDRPVNKPTYDMLSN
Q

Specific function: Unknown

COG id: COG2849

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37038; Mature: 37038

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MECYMKNSFFLSSTLLCLLVSTSCQTHRHPEDVVYETYVHRYGVELPAEDWSSRGQHGQV
CCCEECCCHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCCE
LSTRRDGVVVTKTYESGILHGEVTYTFPHRECIEKKEVYDQGNLIQETYYYASGMPKQQI
EEECCCCEEEEEECCCCEEEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHC
DYRSADQYSVISWYEGGAPQSKEEFNEQGLVKADYYNLANQIESSVQDGFGKRIVRDSYG
CCCCCCCEEEEEEECCCCCCCHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLHSVDQIQDGQMTMRTTYHPNGAPAAYTPYVNGVIQGERKTYTMSGEPISIEQWKNNCQ
HHHHHHHCCCCCEEEEEEECCCCCCCEECCCCCCEEECCCEEEEECCCCEEHHHHHCCCC
HGNTIVFENGEKYADLPYVEGRPHGIEYRYRNGNQVVQKRTWVNGRKHGPCYNYVGTTTQ
CCCEEEEECCCCEECCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
TDWYFKDRPVNKPTYDMLSNQ
CCEEECCCCCCCCHHHHHCCC
>Mature Secondary Structure
MECYMKNSFFLSSTLLCLLVSTSCQTHRHPEDVVYETYVHRYGVELPAEDWSSRGQHGQV
CCCEECCCHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCCE
LSTRRDGVVVTKTYESGILHGEVTYTFPHRECIEKKEVYDQGNLIQETYYYASGMPKQQI
EEECCCCEEEEEECCCCEEEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHC
DYRSADQYSVISWYEGGAPQSKEEFNEQGLVKADYYNLANQIESSVQDGFGKRIVRDSYG
CCCCCCCEEEEEEECCCCCCCHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLHSVDQIQDGQMTMRTTYHPNGAPAAYTPYVNGVIQGERKTYTMSGEPISIEQWKNNCQ
HHHHHHHCCCCCEEEEEEECCCCCCCEECCCCCCEEECCCEEEEECCCCEEHHHHHCCCC
HGNTIVFENGEKYADLPYVEGRPHGIEYRYRNGNQVVQKRTWVNGRKHGPCYNYVGTTTQ
CCCEEEEECCCCEECCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
TDWYFKDRPVNKPTYDMLSNQ
CCEEECCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA