| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446004
Identifier: 46446004
GI number: 46446004
Start: 497138
End: 498103
Strand: Direct
Name: 46446004
Synonym: pc0370
Alternate gene names: NA
Gene position: 497138-498103 (Clockwise)
Preceding gene: 46446003
Following gene: 46446007
Centisome position: 20.59
GC content: 38.51
Gene sequence:
>966_bases TTGGAGTGTTATATGAAGAATTCATTTTTCTTATCTTCTACTTTGTTATGTCTATTAGTTTCTACCTCTTGTCAAACTCA TCGTCATCCTGAAGATGTCGTTTATGAAACATATGTTCATCGCTACGGAGTAGAATTGCCGGCTGAAGACTGGTCTTCTC GTGGACAACATGGCCAAGTCTTATCTACACGACGTGATGGTGTGGTCGTTACAAAAACCTATGAATCAGGGATATTGCAT GGAGAAGTAACTTATACATTCCCTCATCGTGAATGCATTGAAAAAAAAGAAGTTTATGATCAGGGGAATTTAATTCAAGA AACTTACTATTATGCGAGTGGAATGCCAAAACAACAAATAGATTATCGATCAGCCGATCAATATTCTGTCATTTCTTGGT ATGAAGGAGGAGCGCCTCAGTCCAAAGAGGAGTTTAACGAGCAAGGATTAGTTAAGGCCGATTATTATAACTTAGCCAAC CAAATAGAATCTTCTGTGCAAGATGGGTTTGGTAAGCGAATAGTGCGGGATAGCTATGGACTCCTTCACTCAGTGGACCA AATCCAAGATGGGCAAATGACAATGCGAACAACCTATCATCCCAACGGAGCTCCTGCAGCTTATACTCCTTATGTAAATG GTGTCATTCAAGGAGAAAGAAAGACTTATACCATGTCTGGGGAACCAATTTCGATTGAACAATGGAAAAATAATTGCCAA CATGGAAATACCATTGTTTTTGAAAATGGAGAAAAATATGCAGATCTTCCTTATGTGGAAGGGCGTCCACATGGTATTGA ATATCGATATCGCAATGGGAATCAAGTTGTTCAAAAAAGAACCTGGGTTAACGGAAGAAAACATGGCCCTTGTTATAATT ATGTAGGAACAACGACTCAAACAGATTGGTATTTTAAAGACCGTCCAGTGAATAAACCTACTTATGATATGTTATCCAAT CAATAG
Upstream 100 bases:
>100_bases ACAAGAAGTTGTAGAAAATGAGCATCAACGATTAAAAACAGCAGTTTCTCAAAAGTTTGCTAATGATCTTAAACAATAAT TTGAGAAAATTCTCATTCAA
Downstream 100 bases:
>100_bases CAGATTCCTTAAGGTTGTCATTAATCAATGACAACCTCTCCAAAAATTGCACATTGACAAGCTAAACGATAGTTGGCGTC CAACCGTTTAGTTGTTAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MECYMKNSFFLSSTLLCLLVSTSCQTHRHPEDVVYETYVHRYGVELPAEDWSSRGQHGQVLSTRRDGVVVTKTYESGILH GEVTYTFPHRECIEKKEVYDQGNLIQETYYYASGMPKQQIDYRSADQYSVISWYEGGAPQSKEEFNEQGLVKADYYNLAN QIESSVQDGFGKRIVRDSYGLLHSVDQIQDGQMTMRTTYHPNGAPAAYTPYVNGVIQGERKTYTMSGEPISIEQWKNNCQ HGNTIVFENGEKYADLPYVEGRPHGIEYRYRNGNQVVQKRTWVNGRKHGPCYNYVGTTTQTDWYFKDRPVNKPTYDMLSN Q
Sequences:
>Translated_321_residues MECYMKNSFFLSSTLLCLLVSTSCQTHRHPEDVVYETYVHRYGVELPAEDWSSRGQHGQVLSTRRDGVVVTKTYESGILH GEVTYTFPHRECIEKKEVYDQGNLIQETYYYASGMPKQQIDYRSADQYSVISWYEGGAPQSKEEFNEQGLVKADYYNLAN QIESSVQDGFGKRIVRDSYGLLHSVDQIQDGQMTMRTTYHPNGAPAAYTPYVNGVIQGERKTYTMSGEPISIEQWKNNCQ HGNTIVFENGEKYADLPYVEGRPHGIEYRYRNGNQVVQKRTWVNGRKHGPCYNYVGTTTQTDWYFKDRPVNKPTYDMLSN Q >Mature_321_residues MECYMKNSFFLSSTLLCLLVSTSCQTHRHPEDVVYETYVHRYGVELPAEDWSSRGQHGQVLSTRRDGVVVTKTYESGILH GEVTYTFPHRECIEKKEVYDQGNLIQETYYYASGMPKQQIDYRSADQYSVISWYEGGAPQSKEEFNEQGLVKADYYNLAN QIESSVQDGFGKRIVRDSYGLLHSVDQIQDGQMTMRTTYHPNGAPAAYTPYVNGVIQGERKTYTMSGEPISIEQWKNNCQ HGNTIVFENGEKYADLPYVEGRPHGIEYRYRNGNQVVQKRTWVNGRKHGPCYNYVGTTTQTDWYFKDRPVNKPTYDMLSN Q
Specific function: Unknown
COG id: COG2849
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37038; Mature: 37038
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MECYMKNSFFLSSTLLCLLVSTSCQTHRHPEDVVYETYVHRYGVELPAEDWSSRGQHGQV CCCEECCCHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCCE LSTRRDGVVVTKTYESGILHGEVTYTFPHRECIEKKEVYDQGNLIQETYYYASGMPKQQI EEECCCCEEEEEECCCCEEEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHC DYRSADQYSVISWYEGGAPQSKEEFNEQGLVKADYYNLANQIESSVQDGFGKRIVRDSYG CCCCCCCEEEEEEECCCCCCCHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLHSVDQIQDGQMTMRTTYHPNGAPAAYTPYVNGVIQGERKTYTMSGEPISIEQWKNNCQ HHHHHHHCCCCCEEEEEEECCCCCCCEECCCCCCEEECCCEEEEECCCCEEHHHHHCCCC HGNTIVFENGEKYADLPYVEGRPHGIEYRYRNGNQVVQKRTWVNGRKHGPCYNYVGTTTQ CCCEEEEECCCCEECCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCC TDWYFKDRPVNKPTYDMLSNQ CCEEECCCCCCCCHHHHHCCC >Mature Secondary Structure MECYMKNSFFLSSTLLCLLVSTSCQTHRHPEDVVYETYVHRYGVELPAEDWSSRGQHGQV CCCEECCCHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCCE LSTRRDGVVVTKTYESGILHGEVTYTFPHRECIEKKEVYDQGNLIQETYYYASGMPKQQI EEECCCCEEEEEECCCCEEEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHC DYRSADQYSVISWYEGGAPQSKEEFNEQGLVKADYYNLANQIESSVQDGFGKRIVRDSYG CCCCCCCEEEEEEECCCCCCCHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLHSVDQIQDGQMTMRTTYHPNGAPAAYTPYVNGVIQGERKTYTMSGEPISIEQWKNNCQ HHHHHHHCCCCCEEEEEEECCCCCCCEECCCCCCEEECCCEEEEECCCCEEHHHHHCCCC HGNTIVFENGEKYADLPYVEGRPHGIEYRYRNGNQVVQKRTWVNGRKHGPCYNYVGTTTQ CCCEEEEECCCCEECCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCC TDWYFKDRPVNKPTYDMLSNQ CCEEECCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA