Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46445977

Identifier: 46445977

GI number: 46445977

Start: 466255

End: 467232

Strand: Reverse

Name: 46445977

Synonym: pc0343

Alternate gene names: NA

Gene position: 467232-466255 (Counterclockwise)

Preceding gene: 46445978

Following gene: 46445976

Centisome position: 19.35

GC content: 34.56

Gene sequence:

>978_bases
ATGCAAATTATTCACGATGCTTTAAATGGCTTTTATAGTTGGTACACTGAAAGTGAATATGAAAAAATTAAACGCCAAGA
CGAAAAAATTAAACACCAAGCTACTTTTTTAAGTGAACAACTATTGTCAGTAATACATCAAATTGTCAAGGCTTGGTTAG
AAAAATATAACAACAGTATGATTACTGGATCGACGATAGATGTACTAGATCATAGCCGGCACAATTTTTCTGCCTTAGTT
TATGTACGCGAGGCAAAATCGTGGCAACGTCACCTAACTGCAATCGGACGTTTAGACCTTAAAAAACTTTCAAAAGAAGA
AGTTTTTTTTGTTGAAAAAACTACGAATAATGTAAAAAAAGTTTATAACATGGCTCAAAAACGTCTGTCATTAATTGCAA
CCCAAGAACTTACAGCGGAAATTTTTCCAGGCAAGTTTGAAGAAGAATTGGATAAAAAAATAGATCAAGTTCGATTTGAT
TATATGACTTTCGCTGACGAGTGGCAAGAAGAATTAAAACAAGACCATGCAAACATCGTTAGAAACCAACAATTAGCTAA
TGTTGTCAACGAACTTTGGAAGGACTGGAAACATTTGTGGGTTTTCGCTGAATTTCCAGACGCAACCCCTACGACCGAAG
GCTGTTTGCTCCAGGTAGTAGGCAGAAGCACTACAAATCCTAAGGATGAAGTGACCGAGACAATATTTAAAGTTAACCAT
GTTACCAAAGGTGTATATGAAATTATTTGCACCATAGAAGAAAGTATTAATGTGATTGATTCGTACTTAAAGGTTAGAGT
TAGTGAAGTAAAAGTTGGTAATAAACTTTTAGGTTATTCTCAAATCGGATCATCAGGCGAAAAAGTTCCAACTTCTAAAG
AAAGCTTCATGAATCGAATTATCGCAGAAGCAATTAGACGGGTTGATAGCAAAAAAGAAGTTTTAAATCTTATTATGGAT
GTAGAATTCCCAGAATAA

Upstream 100 bases:

>100_bases
GTTGTTTGTAATTAGGAAATTAAATTAATTGTTTTTTTAAAATTTTGACTTTATGTTTTTTGAAACATAAAATGTCTTTT
AATTAATATAGGAAATAGTT

Downstream 100 bases:

>100_bases
AATGGGATATTAGTAACTACGCCTGTACAAGAGACAGAGCGTAAGTAAGTCCTTTAAATAGTTGTCCAACCTATAAGATT
ACAATTAAATCGCTATATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MQIIHDALNGFYSWYTESEYEKIKRQDEKIKHQATFLSEQLLSVIHQIVKAWLEKYNNSMITGSTIDVLDHSRHNFSALV
YVREAKSWQRHLTAIGRLDLKKLSKEEVFFVEKTTNNVKKVYNMAQKRLSLIATQELTAEIFPGKFEEELDKKIDQVRFD
YMTFADEWQEELKQDHANIVRNQQLANVVNELWKDWKHLWVFAEFPDATPTTEGCLLQVVGRSTTNPKDEVTETIFKVNH
VTKGVYEIICTIEESINVIDSYLKVRVSEVKVGNKLLGYSQIGSSGEKVPTSKESFMNRIIAEAIRRVDSKKEVLNLIMD
VEFPE

Sequences:

>Translated_325_residues
MQIIHDALNGFYSWYTESEYEKIKRQDEKIKHQATFLSEQLLSVIHQIVKAWLEKYNNSMITGSTIDVLDHSRHNFSALV
YVREAKSWQRHLTAIGRLDLKKLSKEEVFFVEKTTNNVKKVYNMAQKRLSLIATQELTAEIFPGKFEEELDKKIDQVRFD
YMTFADEWQEELKQDHANIVRNQQLANVVNELWKDWKHLWVFAEFPDATPTTEGCLLQVVGRSTTNPKDEVTETIFKVNH
VTKGVYEIICTIEESINVIDSYLKVRVSEVKVGNKLLGYSQIGSSGEKVPTSKESFMNRIIAEAIRRVDSKKEVLNLIMD
VEFPE
>Mature_325_residues
MQIIHDALNGFYSWYTESEYEKIKRQDEKIKHQATFLSEQLLSVIHQIVKAWLEKYNNSMITGSTIDVLDHSRHNFSALV
YVREAKSWQRHLTAIGRLDLKKLSKEEVFFVEKTTNNVKKVYNMAQKRLSLIATQELTAEIFPGKFEEELDKKIDQVRFD
YMTFADEWQEELKQDHANIVRNQQLANVVNELWKDWKHLWVFAEFPDATPTTEGCLLQVVGRSTTNPKDEVTETIFKVNH
VTKGVYEIICTIEESINVIDSYLKVRVSEVKVGNKLLGYSQIGSSGEKVPTSKESFMNRIIAEAIRRVDSKKEVLNLIMD
VEFPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37813; Mature: 37813

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIIHDALNGFYSWYTESEYEKIKRQDEKIKHQATFLSEQLLSVIHQIVKAWLEKYNNSM
CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
ITGSTIDVLDHSRHNFSALVYVREAKSWQRHLTAIGRLDLKKLSKEEVFFVEKTTNNVKK
ECCCHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEHHHHHHHH
VYNMAQKRLSLIATQELTAEIFPGKFEEELDKKIDQVRFDYMTFADEWQEELKQDHANIV
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNQQLANVVNELWKDWKHLWVFAEFPDATPTTEGCLLQVVGRSTTNPKDEVTETIFKVNH
HHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHH
VTKGVYEIICTIEESINVIDSYLKVRVSEVKVGNKLLGYSQIGSSGEKVPTSKESFMNRI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHCCCCCCCCCCHHHHHHHH
IAEAIRRVDSKKEVLNLIMDVEFPE
HHHHHHHCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQIIHDALNGFYSWYTESEYEKIKRQDEKIKHQATFLSEQLLSVIHQIVKAWLEKYNNSM
CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
ITGSTIDVLDHSRHNFSALVYVREAKSWQRHLTAIGRLDLKKLSKEEVFFVEKTTNNVKK
ECCCHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEHHHHHHHH
VYNMAQKRLSLIATQELTAEIFPGKFEEELDKKIDQVRFDYMTFADEWQEELKQDHANIV
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNQQLANVVNELWKDWKHLWVFAEFPDATPTTEGCLLQVVGRSTTNPKDEVTETIFKVNH
HHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHH
VTKGVYEIICTIEESINVIDSYLKVRVSEVKVGNKLLGYSQIGSSGEKVPTSKESFMNRI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHCCCCCCCCCCHHHHHHHH
IAEAIRRVDSKKEVLNLIMDVEFPE
HHHHHHHCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA