| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
Click here to switch to the map view.
The map label for this gene is 46445971
Identifier: 46445971
GI number: 46445971
Start: 461015
End: 461458
Strand: Reverse
Name: 46445971
Synonym: pc0337
Alternate gene names: NA
Gene position: 461458-461015 (Counterclockwise)
Preceding gene: 46445972
Following gene: 46445970
Centisome position: 19.11
GC content: 36.94
Gene sequence:
>444_bases TTGTTAATCAGTCATATGACGCAGAATTTGGGTTATCCGATAGGAAGTTTGGCTCTAGAAGTCACTTTAAGTCAAATGCC TCATCTGCGTCATATTCCCCCTCAACAAATTCCCAAAAGAAGGGCTGACCTTGTTATTCTCACCCCTCACCTTCATCCCT CTTTTCCTCTTTATCCTTTGTTATTGATCGAATGTAAAGCTGTCCCTCTCACAGATAAAGCTATGCGCCAAGTCGTAGGT TATAATCAATTTCTTAAAGCTTGTTTTATTGGATTGGCAAATCAAGACGAAAAAAGACTTGGTTGGTACGATCCTCAACA AAAAGATTATCAAGCTATTACAAATATTTTTTCTTACCCTTCTCTTCTGCAGCAAGCAAAATTATCCCTTATCGATCCGA ACCATAATAAATTAATATTTGATCCTTCGGAACTAATAAAATGA
Upstream 100 bases:
>100_bases TTATTGATTTAAACAGCTAATGTGATCTATGCCTAATCAACTTTTCTGTTCTGTTCGAAAGAAATGGATTTTAGAAACAC CTGAAGAGAAAGTTAGGCAA
Downstream 100 bases:
>100_bases GCAGATGAAAATTAAGCTTTAGAAAGATTTTGTGGGAATAATGGCGACGATTCAAAAGGCCCGTTGAATCTGGGGACCCG GCCCGAGCAGATGAAATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MLISHMTQNLGYPIGSLALEVTLSQMPHLRHIPPQQIPKRRADLVILTPHLHPSFPLYPLLLIECKAVPLTDKAMRQVVG YNQFLKACFIGLANQDEKRLGWYDPQQKDYQAITNIFSYPSLLQQAKLSLIDPNHNKLIFDPSELIK
Sequences:
>Translated_147_residues MLISHMTQNLGYPIGSLALEVTLSQMPHLRHIPPQQIPKRRADLVILTPHLHPSFPLYPLLLIECKAVPLTDKAMRQVVG YNQFLKACFIGLANQDEKRLGWYDPQQKDYQAITNIFSYPSLLQQAKLSLIDPNHNKLIFDPSELIK >Mature_147_residues MLISHMTQNLGYPIGSLALEVTLSQMPHLRHIPPQQIPKRRADLVILTPHLHPSFPLYPLLLIECKAVPLTDKAMRQVVG YNQFLKACFIGLANQDEKRLGWYDPQQKDYQAITNIFSYPSLLQQAKLSLIDPNHNKLIFDPSELIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16824; Mature: 16824
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLISHMTQNLGYPIGSLALEVTLSQMPHLRHIPPQQIPKRRADLVILTPHLHPSFPLYPL CCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCEEEECCCCCCCCCHHHH LLIECKAVPLTDKAMRQVVGYNQFLKACFIGLANQDEKRLGWYDPQQKDYQAITNIFSYP HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH SLLQQAKLSLIDPNHNKLIFDPSELIK HHHHHHHHHHCCCCCCEEEECHHHHCC >Mature Secondary Structure MLISHMTQNLGYPIGSLALEVTLSQMPHLRHIPPQQIPKRRADLVILTPHLHPSFPLYPL CCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCEEEECCCCCCCCCHHHH LLIECKAVPLTDKAMRQVVGYNQFLKACFIGLANQDEKRLGWYDPQQKDYQAITNIFSYP HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH SLLQQAKLSLIDPNHNKLIFDPSELIK HHHHHHHHHHCCCCCCEEEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA