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The map label for this gene is ytgC [C]

Identifier: 46445892

GI number: 46445892

Start: 363505

End: 364857

Strand: Direct

Name: ytgC [C]

Synonym: pc0258

Alternate gene names: 46445892

Gene position: 363505-364857 (Clockwise)

Preceding gene: 46445891

Following gene: 46445893

Centisome position: 15.06

GC content: 35.55

Gene sequence:

>1353_bases
GTGTACTCTCCATTTTCTTTTTTCATTGATCCTGTTTTACGAGCTCCAACGATAGGTTGTATGTTAATGAGTTTAACGGC
AAGCATGATTGGAGTTGTGATTTTTTTACGAAAACAAGTTCTCGCAGGAGAAACGTTATCTCATGCATCTTATCCTGGTG
TGATTATAGGAATTTTGTTAGCAGGTTTTTTTTCGGTAGAAGAAACCGATGAATTACGTTTAGCTTTGTTTACCTTAACA
GGAGCTTTTGCAACCTCTTTAGTCGGAGTGGGTTTCGTACAATTTCTCGAAAAAAAAATAAAAGTGACAAGTGATGCAGC
TCTTTGTTTTGTTCTTTCGACTTTTTTTGGGGTGGGGTTGATGCTGACAAGTGAAGTACAATTCACCTATACATCTTTGT
ATAAACAGATCTCCACTTATTTGTATGGTCAAGCCGCTACCATGACAGATATTCATATTATGGTTTATGGGAGTTTGTTG
CTAGTCGTTATTACGATAATCAGCTGGCTTTATAAAGAAATACAAATTTTAACTTTTGATAGACAATATGCAAAAAGCTT
AGGTATTCACGTTAGGACAATTGAAATTCTCATTTTTATCTTACTTACGTTGACGGTTATTATTGGAATTAGGTCTGTGG
GTGTAGTTTTGATGTCGGCGATGCTTGTCGCTCCGGCAGTTGCAGCTAGACAATTTACAAACAAATTTTCAATGATGCTC
ATTCTTTCAGGATTTTTTGGATTATTAAGCGGTTTCTTGGGCAATTATCTATCTGTCCAAATAACTGATTTACTTGCAAG
TTATTATCCTTCTTCACGTCTCGTGTTACCAACAGGCCCTATGATTGTCATTGTGGCTTCGTTTATTTGTTTATTAGCCT
TATTATTCGCTCCCGAACGAGGATTACTGATCCGGCTTATTAGAATTGGTTATTTTCATTATGAATGCACATGCGAAAAT
TTACTGAAAACAATTTGGAGGTTGAGTCCGGACATTGTTGTTCGTTTTGACCAGTTAATCAAATATCAGCCTTCTTCGCC
TTTATACTTAATATTTGTTTTGCATCGAATGAAACATAATGGATGGATTCAGTTTAATAGAGATAATACTTATCAACTGA
CTCAAGATGGACAATTAAGAGCAGCTAAAATTATACGGTTACATCGTTTATGGGAAGTTTATTTAGTGGAATATTTAGGG
GCACGAACAGAAAGAGTCCATCATAATGCCGAAGAAATGGAACATATTTTAACTCCAGAATTAGAAAAAGAATTAACTGA
ACTTTTACATGATCCTAAGCACGATCCTCATAGACAACCTATTCCATCTAAGGAAGGGATGCATGTTGTTTAA

Upstream 100 bases:

>100_bases
TTGCATGCCACCTATGGGAAAAGCTACGCTTTATTTGATGAAGCTTTAAAACTGTCGTTACAAAAACAAACAGGATTAAA
AATTCAGGCTAAGGAATAAC

Downstream 100 bases:

>100_bases
TACCTCATTTTATAATCCATACCACGATAAAAATTTTTTGGAGTTTTTTTGGCAATTGCTAGTTAGACTGATGCAAGGGA
TAATCGGGCAATTACCTTTC

Product: putative ABC transporter permease ytgC

Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MYSPFSFFIDPVLRAPTIGCMLMSLTASMIGVVIFLRKQVLAGETLSHASYPGVIIGILLAGFFSVEETDELRLALFTLT
GAFATSLVGVGFVQFLEKKIKVTSDAALCFVLSTFFGVGLMLTSEVQFTYTSLYKQISTYLYGQAATMTDIHIMVYGSLL
LVVITIISWLYKEIQILTFDRQYAKSLGIHVRTIEILIFILLTLTVIIGIRSVGVVLMSAMLVAPAVAARQFTNKFSMML
ILSGFFGLLSGFLGNYLSVQITDLLASYYPSSRLVLPTGPMIVIVASFICLLALLFAPERGLLIRLIRIGYFHYECTCEN
LLKTIWRLSPDIVVRFDQLIKYQPSSPLYLIFVLHRMKHNGWIQFNRDNTYQLTQDGQLRAAKIIRLHRLWEVYLVEYLG
ARTERVHHNAEEMEHILTPELEKELTELLHDPKHDPHRQPIPSKEGMHVV

Sequences:

>Translated_450_residues
MYSPFSFFIDPVLRAPTIGCMLMSLTASMIGVVIFLRKQVLAGETLSHASYPGVIIGILLAGFFSVEETDELRLALFTLT
GAFATSLVGVGFVQFLEKKIKVTSDAALCFVLSTFFGVGLMLTSEVQFTYTSLYKQISTYLYGQAATMTDIHIMVYGSLL
LVVITIISWLYKEIQILTFDRQYAKSLGIHVRTIEILIFILLTLTVIIGIRSVGVVLMSAMLVAPAVAARQFTNKFSMML
ILSGFFGLLSGFLGNYLSVQITDLLASYYPSSRLVLPTGPMIVIVASFICLLALLFAPERGLLIRLIRIGYFHYECTCEN
LLKTIWRLSPDIVVRFDQLIKYQPSSPLYLIFVLHRMKHNGWIQFNRDNTYQLTQDGQLRAAKIIRLHRLWEVYLVEYLG
ARTERVHHNAEEMEHILTPELEKELTELLHDPKHDPHRQPIPSKEGMHVV
>Mature_450_residues
MYSPFSFFIDPVLRAPTIGCMLMSLTASMIGVVIFLRKQVLAGETLSHASYPGVIIGILLAGFFSVEETDELRLALFTLT
GAFATSLVGVGFVQFLEKKIKVTSDAALCFVLSTFFGVGLMLTSEVQFTYTSLYKQISTYLYGQAATMTDIHIMVYGSLL
LVVITIISWLYKEIQILTFDRQYAKSLGIHVRTIEILIFILLTLTVIIGIRSVGVVLMSAMLVAPAVAARQFTNKFSMML
ILSGFFGLLSGFLGNYLSVQITDLLASYYPSSRLVLPTGPMIVIVASFICLLALLFAPERGLLIRLIRIGYFHYECTCEN
LLKTIWRLSPDIVVRFDQLIKYQPSSPLYLIFVLHRMKHNGWIQFNRDNTYQLTQDGQLRAAKIIRLHRLWEVYLVEYLG
ARTERVHHNAEEMEHILTPELEKELTELLHDPKHDPHRQPIPSKEGMHVV

Specific function: Part of an ATP-driven transport system CPn_0346/CPn_0347/CPn_0348/CPn_0349 for a metal [H]

COG id: COG1108

COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-3 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1788166, Length=277, Percent_Identity=21.2996389891697, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001626
- InterPro:   IPR001367
- InterPro:   IPR022689
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00950 ABC-3; PF02742 Fe_dep_repr_C [H]

EC number: NA

Molecular weight: Translated: 50890; Mature: 50890

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Zn (II) [Periplasm]; H2O; ATP [C]

Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362 [H]