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The map label for this gene is ytgD [C]

Identifier: 46445893

GI number: 46445893

Start: 364847

End: 365857

Strand: Direct

Name: ytgD [C]

Synonym: pc0259

Alternate gene names: 46445893

Gene position: 364847-365857 (Clockwise)

Preceding gene: 46445892

Following gene: 46445894

Centisome position: 15.11

GC content: 36.1

Gene sequence:

>1011_bases
ATGTTGTTTAATACCTCATTTTATAATCCATACCACGATAAAAATTTTTTGGAGTTTTTTTGGCAATTGCTAGTTAGACT
GATGCAAGGGATAATCGGGCAATTACCTTTCGATCATTTAGTGTCTGATGAAATTCAAATCTTGGTTTTATCTGGTGTAG
CAGCATCATCTGCTCTGATTGGGACTTTTTTGGTACTCAGGCGGATGACTATGTTAGCTAATTCATTGTCGCATACAATC
TTGATTGGAATTGTGCTAGCTTATTTTTTTAGCTCGGCCGCATCTACAAGTGGGCATGGTTTGATTACTATGCAAGCCAT
GTTGATTGCTTCTTTAGTAACTGGTTTTTTAACAGCTTTCCTAACAGAGTTTTTGATTAAAACAGGTGGTTTACAAGAAG
ATGCGAGCGTAGGCCTTGTTTTTACAAGTTTTTTTGCTTTAGGAGTTATTCTTGTGACTGTTTTAATTCGAGATGCTCAT
ATAGGGACAGAAGCGGTCATGGGTAATGCTGATGCGCTTCATTCAAAAGACATCTATTGGGTTTATCTTGTTTTAATCAT
TAATCTTATTTTGATCACTGTTTTTTTTAAGATTTTTCAGTTGACAACTTTTGATCCATATTTAGCTTTTGCACTCGGTT
TTTCTCCAAACTTATTCAATTATTTATTAATGGCTCAGGTTTCTATTACCTCTATTACAGCATTTCGAGCCATTGGAGTC
ATTTTAGTTTTAGCTTTTATGACAGGTCCCGTTTTAACAGCTCGCCTTTTCACTCATCGTCTTCGTACATTGCTGGCTTA
TGCTGTGTTGATTGGCATATTAACAGCTTTCTCAGGAGTTGCTTTAACAAGACATATTTTAACTGTTTATGGAATAGCCT
TATCCACGTCTGGCGTTGTCGTTACTTTAATTCTAATGATTTATCTCATTGCTTTAATCATAGCACCTGAGCAAGGGCTG
TTTGTTCGTTGGGTTCAGCATAACAAAATGAGACATTCTGTTTCAGAGTAG

Upstream 100 bases:

>100_bases
CATATTTTAACTCCAGAATTAGAAAAAGAATTAACTGAACTTTTACATGATCCTAAGCACGATCCTCATAGACAACCTAT
TCCATCTAAGGAAGGGATGC

Downstream 100 bases:

>100_bases
TGTATTATCAAATAACAAGAGAGGTTCATTGACTTTTTCGTACAGCTTGCTATACTAGCAAAATATTAAAAAAAGAATCG
AAGATGAAACATATTGCCAT

Product: putative ABC transporter permease ytgD

Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MLFNTSFYNPYHDKNFLEFFWQLLVRLMQGIIGQLPFDHLVSDEIQILVLSGVAASSALIGTFLVLRRMTMLANSLSHTI
LIGIVLAYFFSSAASTSGHGLITMQAMLIASLVTGFLTAFLTEFLIKTGGLQEDASVGLVFTSFFALGVILVTVLIRDAH
IGTEAVMGNADALHSKDIYWVYLVLIINLILITVFFKIFQLTTFDPYLAFALGFSPNLFNYLLMAQVSITSITAFRAIGV
ILVLAFMTGPVLTARLFTHRLRTLLAYAVLIGILTAFSGVALTRHILTVYGIALSTSGVVVTLILMIYLIALIIAPEQGL
FVRWVQHNKMRHSVSE

Sequences:

>Translated_336_residues
MLFNTSFYNPYHDKNFLEFFWQLLVRLMQGIIGQLPFDHLVSDEIQILVLSGVAASSALIGTFLVLRRMTMLANSLSHTI
LIGIVLAYFFSSAASTSGHGLITMQAMLIASLVTGFLTAFLTEFLIKTGGLQEDASVGLVFTSFFALGVILVTVLIRDAH
IGTEAVMGNADALHSKDIYWVYLVLIINLILITVFFKIFQLTTFDPYLAFALGFSPNLFNYLLMAQVSITSITAFRAIGV
ILVLAFMTGPVLTARLFTHRLRTLLAYAVLIGILTAFSGVALTRHILTVYGIALSTSGVVVTLILMIYLIALIIAPEQGL
FVRWVQHNKMRHSVSE
>Mature_336_residues
MLFNTSFYNPYHDKNFLEFFWQLLVRLMQGIIGQLPFDHLVSDEIQILVLSGVAASSALIGTFLVLRRMTMLANSLSHTI
LIGIVLAYFFSSAASTSGHGLITMQAMLIASLVTGFLTAFLTEFLIKTGGLQEDASVGLVFTSFFALGVILVTVLIRDAH
IGTEAVMGNADALHSKDIYWVYLVLIINLILITVFFKIFQLTTFDPYLAFALGFSPNLFNYLLMAQVSITSITAFRAIGV
ILVLAFMTGPVLTARLFTHRLRTLLAYAVLIGILTAFSGVALTRHILTVYGIALSTSGVVVTLILMIYLIALIIAPEQGL
FVRWVQHNKMRHSVSE

Specific function: Part of an ATP-driven transport system CT_067/CT_068/CT_069/CT_070 for a metal [H]

COG id: COG1108

COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-3 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001626 [H]

Pfam domain/function: PF00950 ABC-3 [H]

EC number: NA

Molecular weight: Translated: 37025; Mature: 37025

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFNTSFYNPYHDKNFLEFFWQLLVRLMQGIIGQLPFDHLVSDEIQILVLSGVAASSALI
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEECCHHHHHHH
GTFLVLRRMTMLANSLSHTILIGIVLAYFFSSAASTSGHGLITMQAMLIASLVTGFLTAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
LTEFLIKTGGLQEDASVGLVFTSFFALGVILVTVLIRDAHIGTEAVMGNADALHSKDIYW
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHCCCCHHH
VYLVLIINLILITVFFKIFQLTTFDPYLAFALGFSPNLFNYLLMAQVSITSITAFRAIGV
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ILVLAFMTGPVLTARLFTHRLRTLLAYAVLIGILTAFSGVALTRHILTVYGIALSTSGVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
VTLILMIYLIALIIAPEQGLFVRWVQHNKMRHSVSE
HHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCC
>Mature Secondary Structure
MLFNTSFYNPYHDKNFLEFFWQLLVRLMQGIIGQLPFDHLVSDEIQILVLSGVAASSALI
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEECCHHHHHHH
GTFLVLRRMTMLANSLSHTILIGIVLAYFFSSAASTSGHGLITMQAMLIASLVTGFLTAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
LTEFLIKTGGLQEDASVGLVFTSFFALGVILVTVLIRDAHIGTEAVMGNADALHSKDIYW
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHCCCCHHH
VYLVLIINLILITVFFKIFQLTTFDPYLAFALGFSPNLFNYLLMAQVSITSITAFRAIGV
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ILVLAFMTGPVLTARLFTHRLRTLLAYAVLIGILTAFSGVALTRHILTVYGIALSTSGVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
VTLILMIYLIALIIAPEQGLFVRWVQHNKMRHSVSE
HHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Zn (II) [Periplasm]; H2O; ATP [C]

Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9784136 [H]