| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46445805
Identifier: 46445805
GI number: 46445805
Start: 250492
End: 252972
Strand: Direct
Name: 46445805
Synonym: pc0171
Alternate gene names: NA
Gene position: 250492-252972 (Clockwise)
Preceding gene: 46445804
Following gene: 46445806
Centisome position: 10.37
GC content: 32.45
Gene sequence:
>2481_bases ATGCCAGCAGAGTTTATTAATGATCGTAGCCAATTATTAAAGCTTTCATTTTCACAATTAGAAAATAGAAGCAATCTCCT AAAAAAAACTCATAAGGGTCATACTTACGTTAAGGTAGGGGAAATCAAAACTAATTCTTCCGCATGGATGCGCGTAGCCT ATGTTATCAAGGGAATTACCACCCTGGTTTTTGCTTGTTTCCTTCTTCCTTTATTATTACCTTCTTTCCGCTCTTCTTTA AGCCATTCCTGGAAAATAGCTTATAAAGGCCATATAAATATAAGTGTTTATTTAAAAAAAGCTTTATTAGCCTCTTCTGC AACAAATGAATCTTCCTCTAAGGTAACTATTTTAACGCAAGAAGCAAGGACACTCAAAGAACAAGGAAGATATTTTGAAG CGGCTCTTTTCTATCAAAAATCTTTAGAAGTAAATCCTAAAGATGCTCCTTTGCGAGTTGAATATGCAGAGGTATTAAAA AAGCAAGGTATAGGAGCAAAAAATTTACTACGGAAGCTATATAGAGAAGGACTAAAGCTTGCACCTAATAATATGATCAT TCTTTTCAATCATGCTAAATTTGATGTTGCAGATAAAGAAGCTGAAAGAGATTACAAACAAGCATTTGAAACAAATCTTG ACAACACAGAATTAAGAATTGCGTATGCAAAGTTGTTAATAAAACGCTATGAAGATTCAAAATCTGTTTTGCTAGACGAT GGCGATAGCTTGAAGGATGAGGTGCATAATATTTATAAAGAGGGTTTAAAAAAACAACCGAAGCATCCAATTTTACTTCT GAAATATGCAAAATTTTTGATAAAGCATTTAAATCAAACTCAGGAAGCAGAGGATTGTTATGAAAATGCACAAATCGATT CTAGCAATATTGACTTTCACATGAGTTATGCAGATATATTAGGTGCAAAAAATCCGATCAAAGCTCAAATAATTTATCAA AAATGTTTACAGCAATATCCGCACCATGCGTTTTTACTCTTAAAATTTGCAGAATTTTTGGAAAAATTCTGTTGGGTAGC CAGTGAGGACATAATAGCTTATGGTGAAACAGCATTAGAAAAGAGCCCAGATTCCGTAGAAGTTCACTTACGTTTTGGAG ATTTATTATCTCGATTAGACCCAATAAAAGCTCAAGCCATTTATCAAAAAGCTTTAGCAATAGATCCCAATAACGCTGAA CTACGCATACAGTATGTAAATTTTATTTGGGATAGTAACAGAGAAGAAGCTCTTTTAATTTTGGAAGAAGGCTTAGATTT GCAACCTTGCGATGAAATTCTTTTGGAAGACTATGAAAATAAATGCAAACAATTGCAAAAATCTCAGATGGCTGTTGAAA GATTTCAAAGAGCGCTAGAAGTCGATCCAGATAATAATAAGCTTTTCTTCAGATTTATCGATTATTTTACCGATTATATA GATGAAAGTCAAAAGCTTACAATGTTTGAAAAATTCATCCAAAAACAGCCGGAAAATCCGCTAATTTTATGCCTATACGG ATATTTCTTAATCGAGAAAAGTCGCCAAAATAGTGTTGCCGACGAAAATATGCAAAATTTAGCTTTCAGTCAATTAGAAA ATGCTCTCAAATTAGATCCAATGAATATAACTCTCATACTCATTTACACTCAGGCATTACAAGAGCTAGGAAAATATGAG GAAGCAGCAGCGCAATATCAGAAAATAATAAATTTAGATTTTTTTCTTACTAATGAAATGCGATTAAAATATTTTGAAAC TTTAAAAAAGTTGAATCAAGAAAGTAAGATTGAAGTTTGTTATCAAACAATTTTACAAAACCATTTCGAACTCTCCCTTC ATGAAGAATATATTGAATGGTTAATCTCCCAAGATCGAATGCAAGATGCACTGAATGAGCTGGAAAAAACTTTAAATTAC CAAATGCGGTATGACAAGTATATGCACCTACTAACTGATATTCTAAGTAATAGGGCTAGGATTACACGAGAAGAAATAGA TGAAACATGTGAAAATTATTTATTAGGAAAAATAGCAGAGCAACCACAAAATGCCATTTTAAAATGGTTTTTAGCGCGCT TTTTAGAAGAAAAAAATCAGTTTGATAAAGCGATAGAGCAATACAAAGAAATTTTAAAATTACATCCTCATGCTTCGAAA ATTCAAGCTAAATATGTAGAGCTTTTAGAAAAGAATGGAAACTGGGATGATTTAGAAGCATATGCAGAGAGTTTGAACCA GAACCGAGCTCAAGATGCTCGGATTCTGTATCTGATTAAGGATATTTTTAAATATGCAAATGAGGTTCCCAGAGTAATTC GATTATCTGAAAGAATGTTGCCTATTCTATCGGATGAGCAATTAGAAATTTATGAAAATTTTCTTCAAGATGATGCCCAT GACCCAAATGCTTTGGAAAAATTTTATGAATTTAAAAATAAAAAAACAGAGTTACTAGCCGATACAGCAGAATTATCCTA A
Upstream 100 bases:
>100_bases TTCAAGGATAACTAAATAAAACTTAATAAATTATTAATTTGATTAATTATTTGTTAATAAATTAAATTTACTTGCTTATA TCAATAATTCAAGGGGCCTT
Downstream 100 bases:
>100_bases TTCAAGTTTTGATTAGCATAAAAAAGTAAGCAATTTTCACATTGCTTACTTTAAACTTTAAAACCATCTCAAATTCATCA ACTAAGGAATGTATGCTTTA
Product: putative O-linked N-acetylglucosamine transferase
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein
Number of amino acids: Translated: 826; Mature: 825
Protein sequence:
>826_residues MPAEFINDRSQLLKLSFSQLENRSNLLKKTHKGHTYVKVGEIKTNSSAWMRVAYVIKGITTLVFACFLLPLLLPSFRSSL SHSWKIAYKGHINISVYLKKALLASSATNESSSKVTILTQEARTLKEQGRYFEAALFYQKSLEVNPKDAPLRVEYAEVLK KQGIGAKNLLRKLYREGLKLAPNNMIILFNHAKFDVADKEAERDYKQAFETNLDNTELRIAYAKLLIKRYEDSKSVLLDD GDSLKDEVHNIYKEGLKKQPKHPILLLKYAKFLIKHLNQTQEAEDCYENAQIDSSNIDFHMSYADILGAKNPIKAQIIYQ KCLQQYPHHAFLLLKFAEFLEKFCWVASEDIIAYGETALEKSPDSVEVHLRFGDLLSRLDPIKAQAIYQKALAIDPNNAE LRIQYVNFIWDSNREEALLILEEGLDLQPCDEILLEDYENKCKQLQKSQMAVERFQRALEVDPDNNKLFFRFIDYFTDYI DESQKLTMFEKFIQKQPENPLILCLYGYFLIEKSRQNSVADENMQNLAFSQLENALKLDPMNITLILIYTQALQELGKYE EAAAQYQKIINLDFFLTNEMRLKYFETLKKLNQESKIEVCYQTILQNHFELSLHEEYIEWLISQDRMQDALNELEKTLNY QMRYDKYMHLLTDILSNRARITREEIDETCENYLLGKIAEQPQNAILKWFLARFLEEKNQFDKAIEQYKEILKLHPHASK IQAKYVELLEKNGNWDDLEAYAESLNQNRAQDARILYLIKDIFKYANEVPRVIRLSERMLPILSDEQLEIYENFLQDDAH DPNALEKFYEFKNKKTELLADTAELS
Sequences:
>Translated_826_residues MPAEFINDRSQLLKLSFSQLENRSNLLKKTHKGHTYVKVGEIKTNSSAWMRVAYVIKGITTLVFACFLLPLLLPSFRSSL SHSWKIAYKGHINISVYLKKALLASSATNESSSKVTILTQEARTLKEQGRYFEAALFYQKSLEVNPKDAPLRVEYAEVLK KQGIGAKNLLRKLYREGLKLAPNNMIILFNHAKFDVADKEAERDYKQAFETNLDNTELRIAYAKLLIKRYEDSKSVLLDD GDSLKDEVHNIYKEGLKKQPKHPILLLKYAKFLIKHLNQTQEAEDCYENAQIDSSNIDFHMSYADILGAKNPIKAQIIYQ KCLQQYPHHAFLLLKFAEFLEKFCWVASEDIIAYGETALEKSPDSVEVHLRFGDLLSRLDPIKAQAIYQKALAIDPNNAE LRIQYVNFIWDSNREEALLILEEGLDLQPCDEILLEDYENKCKQLQKSQMAVERFQRALEVDPDNNKLFFRFIDYFTDYI DESQKLTMFEKFIQKQPENPLILCLYGYFLIEKSRQNSVADENMQNLAFSQLENALKLDPMNITLILIYTQALQELGKYE EAAAQYQKIINLDFFLTNEMRLKYFETLKKLNQESKIEVCYQTILQNHFELSLHEEYIEWLISQDRMQDALNELEKTLNY QMRYDKYMHLLTDILSNRARITREEIDETCENYLLGKIAEQPQNAILKWFLARFLEEKNQFDKAIEQYKEILKLHPHASK IQAKYVELLEKNGNWDDLEAYAESLNQNRAQDARILYLIKDIFKYANEVPRVIRLSERMLPILSDEQLEIYENFLQDDAH DPNALEKFYEFKNKKTELLADTAELS >Mature_825_residues PAEFINDRSQLLKLSFSQLENRSNLLKKTHKGHTYVKVGEIKTNSSAWMRVAYVIKGITTLVFACFLLPLLLPSFRSSLS HSWKIAYKGHINISVYLKKALLASSATNESSSKVTILTQEARTLKEQGRYFEAALFYQKSLEVNPKDAPLRVEYAEVLKK QGIGAKNLLRKLYREGLKLAPNNMIILFNHAKFDVADKEAERDYKQAFETNLDNTELRIAYAKLLIKRYEDSKSVLLDDG DSLKDEVHNIYKEGLKKQPKHPILLLKYAKFLIKHLNQTQEAEDCYENAQIDSSNIDFHMSYADILGAKNPIKAQIIYQK CLQQYPHHAFLLLKFAEFLEKFCWVASEDIIAYGETALEKSPDSVEVHLRFGDLLSRLDPIKAQAIYQKALAIDPNNAEL RIQYVNFIWDSNREEALLILEEGLDLQPCDEILLEDYENKCKQLQKSQMAVERFQRALEVDPDNNKLFFRFIDYFTDYID ESQKLTMFEKFIQKQPENPLILCLYGYFLIEKSRQNSVADENMQNLAFSQLENALKLDPMNITLILIYTQALQELGKYEE AAAQYQKIINLDFFLTNEMRLKYFETLKKLNQESKIEVCYQTILQNHFELSLHEEYIEWLISQDRMQDALNELEKTLNYQ MRYDKYMHLLTDILSNRARITREEIDETCENYLLGKIAEQPQNAILKWFLARFLEEKNQFDKAIEQYKEILKLHPHASKI QAKYVELLEKNGNWDDLEAYAESLNQNRAQDARILYLIKDIFKYANEVPRVIRLSERMLPILSDEQLEIYENFLQDDAHD PNALEKFYEFKNKKTELLADTAELS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96714; Mature: 96583
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAEFINDRSQLLKLSFSQLENRSNLLKKTHKGHTYVKVGEIKTNSSAWMRVAYVIKGIT CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECEECCCHHHHHHHHHHHHHH TLVFACFLLPLLLPSFRSSLSHSWKIAYKGHINISVYLKKALLASSATNESSSKVTILTQ HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEHHHHHHHHHHCCCCCCCCEEEEEEH EARTLKEQGRYFEAALFYQKSLEVNPKDAPLRVEYAEVLKKQGIGAKNLLRKLYREGLKL HHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCHHHHHHHHHHCCCCC APNNMIILFNHAKFDVADKEAERDYKQAFETNLDNTELRIAYAKLLIKRYEDSKSVLLDD CCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEECC GDSLKDEVHNIYKEGLKKQPKHPILLLKYAKFLIKHLNQTQEAEDCYENAQIDSSNIDFH CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEE MSYADILGAKNPIKAQIIYQKCLQQYPHHAFLLLKFAEFLEKFCWVASEDIIAYGETALE EEHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHC KSPDSVEVHLRFGDLLSRLDPIKAQAIYQKALAIDPNNAELRIQYVNFIWDSNREEALLI CCCCCEEEEEEHHHHHHHCCCHHHHHHHHHHHEECCCCCEEEEEEEEEEECCCCCCEEEE LEEGLDLQPCDEILLEDYENKCKQLQKSQMAVERFQRALEVDPDNNKLFFRFIDYFTDYI EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHH DESQKLTMFEKFIQKQPENPLILCLYGYFLIEKSRQNSVADENMQNLAFSQLENALKLDP CCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEECC MNITLILIYTQALQELGKYEEAAAQYQKIINLDFFLTNEMRLKYFETLKKLNQESKIEVC CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHCCCHHHHHH YQTILQNHFELSLHEEYIEWLISQDRMQDALNELEKTLNYQMRYDKYMHLLTDILSNRAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH ITREEIDETCENYLLGKIAEQPQNAILKWFLARFLEEKNQFDKAIEQYKEILKLHPHASK HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH IQAKYVELLEKNGNWDDLEAYAESLNQNRAQDARILYLIKDIFKYANEVPRVIRLSERML HHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PILSDEQLEIYENFLQDDAHDPNALEKFYEFKNKKTELLADTAELS CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHCCC >Mature Secondary Structure PAEFINDRSQLLKLSFSQLENRSNLLKKTHKGHTYVKVGEIKTNSSAWMRVAYVIKGIT CCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECEECCCHHHHHHHHHHHHHH TLVFACFLLPLLLPSFRSSLSHSWKIAYKGHINISVYLKKALLASSATNESSSKVTILTQ HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEHHHHHHHHHHCCCCCCCCEEEEEEH EARTLKEQGRYFEAALFYQKSLEVNPKDAPLRVEYAEVLKKQGIGAKNLLRKLYREGLKL HHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCHHHHHHHHHHCCCCC APNNMIILFNHAKFDVADKEAERDYKQAFETNLDNTELRIAYAKLLIKRYEDSKSVLLDD CCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEECC GDSLKDEVHNIYKEGLKKQPKHPILLLKYAKFLIKHLNQTQEAEDCYENAQIDSSNIDFH CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEE MSYADILGAKNPIKAQIIYQKCLQQYPHHAFLLLKFAEFLEKFCWVASEDIIAYGETALE EEHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHC KSPDSVEVHLRFGDLLSRLDPIKAQAIYQKALAIDPNNAELRIQYVNFIWDSNREEALLI CCCCCEEEEEEHHHHHHHCCCHHHHHHHHHHHEECCCCCEEEEEEEEEEECCCCCCEEEE LEEGLDLQPCDEILLEDYENKCKQLQKSQMAVERFQRALEVDPDNNKLFFRFIDYFTDYI EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHH DESQKLTMFEKFIQKQPENPLILCLYGYFLIEKSRQNSVADENMQNLAFSQLENALKLDP CCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEECC MNITLILIYTQALQELGKYEEAAAQYQKIINLDFFLTNEMRLKYFETLKKLNQESKIEVC CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHCCCHHHHHH YQTILQNHFELSLHEEYIEWLISQDRMQDALNELEKTLNYQMRYDKYMHLLTDILSNRAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH ITREEIDETCENYLLGKIAEQPQNAILKWFLARFLEEKNQFDKAIEQYKEILKLHPHASK HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH IQAKYVELLEKNGNWDDLEAYAESLNQNRAQDARILYLIKDIFKYANEVPRVIRLSERML HHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PILSDEQLEIYENFLQDDAHDPNALEKFYEFKNKKTELLADTAELS CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA