The gene/protein map for NC_005861 is currently unavailable.
Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

Click here to switch to the map view.

The map label for this gene is 46445779

Identifier: 46445779

GI number: 46445779

Start: 219609

End: 220355

Strand: Reverse

Name: 46445779

Synonym: pc0145

Alternate gene names: NA

Gene position: 220355-219609 (Counterclockwise)

Preceding gene: 46445781

Following gene: 46445773

Centisome position: 9.13

GC content: 36.95

Gene sequence:

>747_bases
ATGAGATCTTCTAATCCTGCTCTTGCTGGGAATCCATTTTCAGGATTTGGCATTGCGTCCAAATCCAGTGCCATGACAAT
TCGTGGAACAATCAACAAAACAGCTATCTTACTCCTACTAGTATTTCTTCCTGCCATCTGGGTTTGGAAAACTTTTTTTA
ATGCTGGACAAAATCCAGCTGCTATTCAAACTTGGATGATGGTTGGCTTGATCGGCGGATTTGTTTTATCTTTAGTCACT
GTGTTTAAAAAAGAGTGGGCTCCATTATCAGCGCCCTTATATGCTATTATGGAAGGTCTATTCTTAGGAGGAATTTCAAG
TATTTTTGAAACTTCTTATCCAGGAATTGTCATGCAAGCAATAAGTTTGACACTTGCTACTTTACTTGCCATGTTAGTTA
TTTACCAAACCGGACTAGTTAAACCAACTGAAAATTTTAAACTAGGAGTCATGGCCGCTACAGGAGGAATTGCTCTTGTT
TATTTAGTCGCTATTGTCTTAGGATTTTTTGGAATCAATGTTTCTTTTATTAACGGAAGTGGTTTATTTAGCATTCTTTT
TAGCTTGTTTGTCGTAGGAATTGCTGCTTTAAATTTTATTATTGATTTTGATTTCATTGAACAAGGGGCGCGAGCCAACG
TTCCTAAATATATGGAATGGTATGGGGCATTTGCTTTGATGGTAACGCTTGTTTGGCTTTATATTGAAATGTTACGTTTG
CTTGCTAAACTTAACGATCGTCGTTAA

Upstream 100 bases:

>100_bases
CTTTTCTTTCAAAGCTTTTAATCCTCTCGTAAAGACTTGTCAAATAAGGCTCTGAAGAAGTAATCTATTTTTTTTACAAC
CAAAGTATAAGGAGTGCTCT

Downstream 100 bases:

>100_bases
TTCTCAATCAGTCGTCGATGTAGGCTATCTACATCGACTTACTTATAATAAAGATAGTCATAGAAATCGGCTTCATTAGT
CAACAAAATACTATGATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein; Permease Of Facilitator Superfamily Protein; Membrane Spanning Protein

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MRSSNPALAGNPFSGFGIASKSSAMTIRGTINKTAILLLLVFLPAIWVWKTFFNAGQNPAAIQTWMMVGLIGGFVLSLVT
VFKKEWAPLSAPLYAIMEGLFLGGISSIFETSYPGIVMQAISLTLATLLAMLVIYQTGLVKPTENFKLGVMAATGGIALV
YLVAIVLGFFGINVSFINGSGLFSILFSLFVVGIAALNFIIDFDFIEQGARANVPKYMEWYGAFALMVTLVWLYIEMLRL
LAKLNDRR

Sequences:

>Translated_248_residues
MRSSNPALAGNPFSGFGIASKSSAMTIRGTINKTAILLLLVFLPAIWVWKTFFNAGQNPAAIQTWMMVGLIGGFVLSLVT
VFKKEWAPLSAPLYAIMEGLFLGGISSIFETSYPGIVMQAISLTLATLLAMLVIYQTGLVKPTENFKLGVMAATGGIALV
YLVAIVLGFFGINVSFINGSGLFSILFSLFVVGIAALNFIIDFDFIEQGARANVPKYMEWYGAFALMVTLVWLYIEMLRL
LAKLNDRR
>Mature_248_residues
MRSSNPALAGNPFSGFGIASKSSAMTIRGTINKTAILLLLVFLPAIWVWKTFFNAGQNPAAIQTWMMVGLIGGFVLSLVT
VFKKEWAPLSAPLYAIMEGLFLGGISSIFETSYPGIVMQAISLTLATLLAMLVIYQTGLVKPTENFKLGVMAATGGIALV
YLVAIVLGFFGINVSFINGSGLFSILFSLFVVGIAALNFIIDFDFIEQGARANVPKYMEWYGAFALMVTLVWLYIEMLRL
LAKLNDRR

Specific function: Unknown

COG id: COG4760

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26976; Mature: 26976

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSSNPALAGNPFSGFGIASKSSAMTIRGTINKTAILLLLVFLPAIWVWKTFFNAGQNPA
CCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
AIQTWMMVGLIGGFVLSLVTVFKKEWAPLSAPLYAIMEGLFLGGISSIFETSYPGIVMQA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
ISLTLATLLAMLVIYQTGLVKPTENFKLGVMAATGGIALVYLVAIVLGFFGINVSFINGS
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCEEEEECCC
GLFSILFSLFVVGIAALNFIIDFDFIEQGARANVPKYMEWYGAFALMVTLVWLYIEMLRL
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LAKLNDRR
HHHHCCCC
>Mature Secondary Structure
MRSSNPALAGNPFSGFGIASKSSAMTIRGTINKTAILLLLVFLPAIWVWKTFFNAGQNPA
CCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
AIQTWMMVGLIGGFVLSLVTVFKKEWAPLSAPLYAIMEGLFLGGISSIFETSYPGIVMQA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
ISLTLATLLAMLVIYQTGLVKPTENFKLGVMAATGGIALVYLVAIVLGFFGINVSFINGS
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCEEEEECCC
GLFSILFSLFVVGIAALNFIIDFDFIEQGARANVPKYMEWYGAFALMVTLVWLYIEMLRL
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LAKLNDRR
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA