| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46445756
Identifier: 46445756
GI number: 46445756
Start: 193247
End: 193447
Strand: Direct
Name: 46445756
Synonym: pc0122
Alternate gene names: NA
Gene position: 193247-193447 (Clockwise)
Preceding gene: 46445754
Following gene: 46445757
Centisome position: 8.0
GC content: 28.86
Gene sequence:
>201_bases ATGAAAAGCATATCCTGTCTCAAGTTTCTAATAGAAAATTTATTATTGGCATTGGCGGGAGGCTCTGCTTGCTATATTTG TGGGGTTTCTTATTTTATCAATCAATTTTTACGTTTATTTAGTCATAAAAATTTAATTTGCGATGAGTGTTATTTTTTTG AATCAGCCTTAAGCTTAAAATTCATGAATTTTCTACTCTAA
Upstream 100 bases:
>100_bases ATTTTTCTTTTAGTAGGAGGGAGTTGGGATTATGAATATCACGCTAACAAACATATTTGAAAGCACAGATAAAATTGAAA TTAGGCGGCCGTAGGTACAA
Downstream 100 bases:
>100_bases AAATTCGGTACTGAATTAATATCGTCTGCAACAAAAAGCGCTCAATAGCATTCACTATCGGTAGAAATTGTTAAGGGAGA AATATGAAAGGAATTGTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 66; Mature: 66
Protein sequence:
>66_residues MKSISCLKFLIENLLLALAGGSACYICGVSYFINQFLRLFSHKNLICDECYFFESALSLKFMNFLL
Sequences:
>Translated_66_residues MKSISCLKFLIENLLLALAGGSACYICGVSYFINQFLRLFSHKNLICDECYFFESALSLKFMNFLL >Mature_66_residues MKSISCLKFLIENLLLALAGGSACYICGVSYFINQFLRLFSHKNLICDECYFFESALSLKFMNFLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7557; Mature: 7557
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 10.6 %Cys+Met (Translated Protein) 7.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 10.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSISCLKFLIENLLLALAGGSACYICGVSYFINQFLRLFSHKNLICDECYFFESALSLK CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH FMNFLL HHHHHC >Mature Secondary Structure MKSISCLKFLIENLLLALAGGSACYICGVSYFINQFLRLFSHKNLICDECYFFESALSLK CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH FMNFLL HHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA