Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is cicA [H]

Identifier: 46445754

GI number: 46445754

Start: 189477

End: 190094

Strand: Direct

Name: cicA [H]

Synonym: pc0120

Alternate gene names: 46445754

Gene position: 189477-190094 (Clockwise)

Preceding gene: 46445744

Following gene: 46445756

Centisome position: 7.85

GC content: 33.66

Gene sequence:

>618_bases
ATGATTCATCCTTCGGTAGTAGCAGCTTTTGATTTTGACAAAACATTGACAAATCGTGATTCATTGCTTCCTTTTCTTTA
TGAACAGACAGGTTTTTTTCAAGCTTCATGGAAAATAATTCAATTAGCTCCCGTTTTCTTAAAATTTTTTTTTGGCAAAC
TTTCTAGACAAGAAATAAAAGAAAAAATTTTAACACAGTTTTTCAAAGGTATACCTATGCGACAGCTTAAGGCTGTTTGT
AAACGTTATGCAGACAAAAAATTAGATGCTTATTTAAACGCTCAAGCTATTGAAAGGCTAAGATGGCATCAAAGGCAAGG
CCATCGTTGCATTCTTGTGAGCGCATCTATTGACCTTTATTTACGTCCTTGGGCAGAAAGATATGGGTTTGAAGAAATTC
TTGCTTCGACATTAGAAGTAGATTCTAAAGGGAATGTGACAGGAAAATTAAAAGGAAAAAATTGTTGGGGAGTTGAAAAA
ACTAAACGTCTTACGAATTACCTTGGCCCTAAAGAAACTTATCAACTTTATGCTTATGGGGATAGTCTAGGCGATCAAGA
ACTTTTAGCATTAGCCGATTACCCTTTTTATAGAAGCTTTAAAACTAAAATTTTTTAA

Upstream 100 bases:

>100_bases
TATAGTCAGACATACTACTTTTATCACAGAAAGTAACGTGGAAAAAATTAAAGACAATTTCTGTGAGTTTATATTTTAAA
ACTTTCTTTTCTGGTTTTTC

Downstream 100 bases:

>100_bases
TCTATTTTATCCGCAACCTGTACGATGTTTGTTTAAGTGAGTTGAGATCAAACAGAAGGTTTGGCCAATTGTTTGACAAA
ATAGCATTAATTTTCTTCAC

Product: putative protein involved in cell wall biosynthesis, morphogenesis and cell division

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MIHPSVVAAFDFDKTLTNRDSLLPFLYEQTGFFQASWKIIQLAPVFLKFFFGKLSRQEIKEKILTQFFKGIPMRQLKAVC
KRYADKKLDAYLNAQAIERLRWHQRQGHRCILVSASIDLYLRPWAERYGFEEILASTLEVDSKGNVTGKLKGKNCWGVEK
TKRLTNYLGPKETYQLYAYGDSLGDQELLALADYPFYRSFKTKIF

Sequences:

>Translated_205_residues
MIHPSVVAAFDFDKTLTNRDSLLPFLYEQTGFFQASWKIIQLAPVFLKFFFGKLSRQEIKEKILTQFFKGIPMRQLKAVC
KRYADKKLDAYLNAQAIERLRWHQRQGHRCILVSASIDLYLRPWAERYGFEEILASTLEVDSKGNVTGKLKGKNCWGVEK
TKRLTNYLGPKETYQLYAYGDSLGDQELLALADYPFYRSFKTKIF
>Mature_205_residues
MIHPSVVAAFDFDKTLTNRDSLLPFLYEQTGFFQASWKIIQLAPVFLKFFFGKLSRQEIKEKILTQFFKGIPMRQLKAVC
KRYADKKLDAYLNAQAIERLRWHQRQGHRCILVSASIDLYLRPWAERYGFEEILASTLEVDSKGNVTGKLKGKNCWGVEK
TKRLTNYLGPKETYQLYAYGDSLGDQELLALADYPFYRSFKTKIF

Specific function: Unknown

COG id: COG0560

COG function: function code E; Phosphoserine phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006383
- InterPro:   IPR006385 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 23917; Mature: 23917

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHPSVVAAFDFDKTLTNRDSLLPFLYEQTGFFQASWKIIQLAPVFLKFFFGKLSRQEIK
CCCCCEEEEECCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH
EKILTQFFKGIPMRQLKAVCKRYADKKLDAYLNAQAIERLRWHQRQGHRCILVSASIDLY
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEEEECCCEE
LRPWAERYGFEEILASTLEVDSKGNVTGKLKGKNCWGVEKTKRLTNYLGPKETYQLYAYG
ECCHHHHCCHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCHHEEEEEEC
DSLGDQELLALADYPFYRSFKTKIF
CCCCCHHHHHHHCCCHHHHHHHCCC
>Mature Secondary Structure
MIHPSVVAAFDFDKTLTNRDSLLPFLYEQTGFFQASWKIIQLAPVFLKFFFGKLSRQEIK
CCCCCEEEEECCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH
EKILTQFFKGIPMRQLKAVCKRYADKKLDAYLNAQAIERLRWHQRQGHRCILVSASIDLY
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEEEECCCEE
LRPWAERYGFEEILASTLEVDSKGNVTGKLKGKNCWGVEKTKRLTNYLGPKETYQLYAYG
ECCHHHHCCHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCHHEEEEEEC
DSLGDQELLALADYPFYRSFKTKIF
CCCCCHHHHHHHCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11169108 [H]