| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is cicA [H]
Identifier: 46445754
GI number: 46445754
Start: 189477
End: 190094
Strand: Direct
Name: cicA [H]
Synonym: pc0120
Alternate gene names: 46445754
Gene position: 189477-190094 (Clockwise)
Preceding gene: 46445744
Following gene: 46445756
Centisome position: 7.85
GC content: 33.66
Gene sequence:
>618_bases ATGATTCATCCTTCGGTAGTAGCAGCTTTTGATTTTGACAAAACATTGACAAATCGTGATTCATTGCTTCCTTTTCTTTA TGAACAGACAGGTTTTTTTCAAGCTTCATGGAAAATAATTCAATTAGCTCCCGTTTTCTTAAAATTTTTTTTTGGCAAAC TTTCTAGACAAGAAATAAAAGAAAAAATTTTAACACAGTTTTTCAAAGGTATACCTATGCGACAGCTTAAGGCTGTTTGT AAACGTTATGCAGACAAAAAATTAGATGCTTATTTAAACGCTCAAGCTATTGAAAGGCTAAGATGGCATCAAAGGCAAGG CCATCGTTGCATTCTTGTGAGCGCATCTATTGACCTTTATTTACGTCCTTGGGCAGAAAGATATGGGTTTGAAGAAATTC TTGCTTCGACATTAGAAGTAGATTCTAAAGGGAATGTGACAGGAAAATTAAAAGGAAAAAATTGTTGGGGAGTTGAAAAA ACTAAACGTCTTACGAATTACCTTGGCCCTAAAGAAACTTATCAACTTTATGCTTATGGGGATAGTCTAGGCGATCAAGA ACTTTTAGCATTAGCCGATTACCCTTTTTATAGAAGCTTTAAAACTAAAATTTTTTAA
Upstream 100 bases:
>100_bases TATAGTCAGACATACTACTTTTATCACAGAAAGTAACGTGGAAAAAATTAAAGACAATTTCTGTGAGTTTATATTTTAAA ACTTTCTTTTCTGGTTTTTC
Downstream 100 bases:
>100_bases TCTATTTTATCCGCAACCTGTACGATGTTTGTTTAAGTGAGTTGAGATCAAACAGAAGGTTTGGCCAATTGTTTGACAAA ATAGCATTAATTTTCTTCAC
Product: putative protein involved in cell wall biosynthesis, morphogenesis and cell division
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MIHPSVVAAFDFDKTLTNRDSLLPFLYEQTGFFQASWKIIQLAPVFLKFFFGKLSRQEIKEKILTQFFKGIPMRQLKAVC KRYADKKLDAYLNAQAIERLRWHQRQGHRCILVSASIDLYLRPWAERYGFEEILASTLEVDSKGNVTGKLKGKNCWGVEK TKRLTNYLGPKETYQLYAYGDSLGDQELLALADYPFYRSFKTKIF
Sequences:
>Translated_205_residues MIHPSVVAAFDFDKTLTNRDSLLPFLYEQTGFFQASWKIIQLAPVFLKFFFGKLSRQEIKEKILTQFFKGIPMRQLKAVC KRYADKKLDAYLNAQAIERLRWHQRQGHRCILVSASIDLYLRPWAERYGFEEILASTLEVDSKGNVTGKLKGKNCWGVEK TKRLTNYLGPKETYQLYAYGDSLGDQELLALADYPFYRSFKTKIF >Mature_205_residues MIHPSVVAAFDFDKTLTNRDSLLPFLYEQTGFFQASWKIIQLAPVFLKFFFGKLSRQEIKEKILTQFFKGIPMRQLKAVC KRYADKKLDAYLNAQAIERLRWHQRQGHRCILVSASIDLYLRPWAERYGFEEILASTLEVDSKGNVTGKLKGKNCWGVEK TKRLTNYLGPKETYQLYAYGDSLGDQELLALADYPFYRSFKTKIF
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR006385 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 23917; Mature: 23917
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHPSVVAAFDFDKTLTNRDSLLPFLYEQTGFFQASWKIIQLAPVFLKFFFGKLSRQEIK CCCCCEEEEECCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH EKILTQFFKGIPMRQLKAVCKRYADKKLDAYLNAQAIERLRWHQRQGHRCILVSASIDLY HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEEEECCCEE LRPWAERYGFEEILASTLEVDSKGNVTGKLKGKNCWGVEKTKRLTNYLGPKETYQLYAYG ECCHHHHCCHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCHHEEEEEEC DSLGDQELLALADYPFYRSFKTKIF CCCCCHHHHHHHCCCHHHHHHHCCC >Mature Secondary Structure MIHPSVVAAFDFDKTLTNRDSLLPFLYEQTGFFQASWKIIQLAPVFLKFFFGKLSRQEIK CCCCCEEEEECCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH EKILTQFFKGIPMRQLKAVCKRYADKKLDAYLNAQAIERLRWHQRQGHRCILVSASIDLY HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEEEECCCEE LRPWAERYGFEEILASTLEVDSKGNVTGKLKGKNCWGVEKTKRLTNYLGPKETYQLYAYG ECCHHHHCCHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCHHEEEEEEC DSLGDQELLALADYPFYRSFKTKIF CCCCCHHHHHHHCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11169108 [H]