The gene/protein map for NC_005861 is currently unavailable.
Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

Click here to switch to the map view.

The map label for this gene is 46445751

Identifier: 46445751

GI number: 46445751

Start: 185231

End: 186907

Strand: Reverse

Name: 46445751

Synonym: pc0117

Alternate gene names: NA

Gene position: 186907-185231 (Counterclockwise)

Preceding gene: 46445752

Following gene: 46445750

Centisome position: 7.74

GC content: 33.99

Gene sequence:

>1677_bases
ATGGGATTCTTATATTTTCAAGGATTGGAATCTAATGAATCCATTTCGCAATTGGGGAGCCAGGCAAAGGCATTTGCCGA
AACACGCGATTTAAAGCAAGCAAGCCAACTTTATGAAAAGCTTTCCACACAAAGCTTACCTGATTGGCAACAAGCCCTTA
TTTTATACAACTGGGGAACAGTAAAAGTTCTTCAGCAAGAGTGGGAGGCTGCCCTAAAAATTTTTAATCGAATTGCCCTT
TCTTCAATTTCTTCTCCCCAACTTTTACGATCTGTAACTCTCAATCGAGCTGCTGCACGTTTAGGACAAGCGAAGCTATT
ATCCGCACAAAATGATACAAATTCATTAGGAGAAAGACGCTACCTCATTTGGCAAAGTTTAAAAGAATTAGAAGCCGCAA
AAGATATTGATTGTCGTATCCAAAAAGTTGAACAAAATCTTTCTGACTGCTTAGTAGTTCCAATAGATATTCATATTCTT
CAAAATAAAGGGGTGTTAGCACTCAATCAGATTAATAAAGAGCTCAAAGATCAATTTTTTGCTAATCTTGATTTAGCTTC
TTTATTGGCGATTCTGCGACAAAGTCTTGCTACAGCTCTTCATTTTTCCTTATTTTTTACTAAGCAGATAATTCCTCATG
AATTTAATGCTGCTTATTTAAAATATTTTACTTTTCAAATGAAAACAATAGAACCCCTTTGGGATGGTTTAAAAAAAATT
TCTTTATCTGATGATCAGCGAAAAATAATCACAATTGCTTTCGAAAACTTCACAAATGCTTTAGATGCTTCACTAAACAG
CAATTGGGAAAATGTTCAGAATCACCTCCAATTTTCAGAGGATTCTCTTCAAAAATTTGCTTCGCAATCCGATTTAGAAA
CTCTTATATTACGCTACCGGTTAACGCTTTTAAATAGGATTGATGAAGTCATTTTAAAAGTTTTGCTAGATACACAAACT
TCTTTTGATAAAAAAGATTTCCTCAAGCAATCCTCACAATTTTTAAAAAAAGCCATTGAAGAAATTCAAATTAATCGTCC
TTTTATTTCCCGTTTTTATGTCATTTGTGCTTTGAGTGAGATTGAGAACTTACAAGCTGAGGAAAGTGAAGAAAGATCTT
GCAAACAAATCCTTCAACAAGCTCTACAAAACGCTATCAGAGGAAATGAGCTCACACAACTTGTCACACTATCTGAAGAT
TTTGCAAACAAGGAAATCATGCTAAAAGATGTTCAAGCTAAGCAACATCAAGTAATTCAGCAATCCTTATCTTTTATTCC
AAACGCTTTAAAAGAAGAAAAAATGAATTTTAACGCAGGAGATTCCAAAATAGCTTGTCAAAAACAACCCTGGGAACAAG
TCATTCCTTTATTTGAAAATGGATTACTAGCAGCTAAGCAAACTGAAATTTGGATGAAAAGTTTTCCTTTACAATTTTTT
GCTATTTTAAATGAGCAACAAAAAACCATTATTAATTGGCAACAAGCTTTAAAACTATTAGAAAATTCTCCTTCATTTTC
AGAGCAAAGCCCTAATCCTAATCCAGATCCTTCTCATTCCAATAGTAAGCCAAAAACAAGTCAAGACATTCAAGAAACCC
TTCGACTTCTCCAAGAAATGCAATCAAATGATCAACCCCAAAAAGGTCAATCTTCTAAAGAGAGACATTCATGGTAA

Upstream 100 bases:

>100_bases
ATTATCAAATTCCTCTAGGAATAAGTATTCTTCTTCTTCTTTTATACTTAATTTTACCTGATGCACGGCGGCCATGAAAA
AACGAATTTTTCTTCTTTAT

Downstream 100 bases:

>100_bases
AAAAATGATCAAAGCTTTATGCATTTATTTTCTTTCCTTTATGTCAACTTTATCAGCCGTAAACATAAAGGTTGAGGCTT
CTATTGATTCTCAAAACAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 558; Mature: 557

Protein sequence:

>558_residues
MGFLYFQGLESNESISQLGSQAKAFAETRDLKQASQLYEKLSTQSLPDWQQALILYNWGTVKVLQQEWEAALKIFNRIAL
SSISSPQLLRSVTLNRAAARLGQAKLLSAQNDTNSLGERRYLIWQSLKELEAAKDIDCRIQKVEQNLSDCLVVPIDIHIL
QNKGVLALNQINKELKDQFFANLDLASLLAILRQSLATALHFSLFFTKQIIPHEFNAAYLKYFTFQMKTIEPLWDGLKKI
SLSDDQRKIITIAFENFTNALDASLNSNWENVQNHLQFSEDSLQKFASQSDLETLILRYRLTLLNRIDEVILKVLLDTQT
SFDKKDFLKQSSQFLKKAIEEIQINRPFISRFYVICALSEIENLQAEESEERSCKQILQQALQNAIRGNELTQLVTLSED
FANKEIMLKDVQAKQHQVIQQSLSFIPNALKEEKMNFNAGDSKIACQKQPWEQVIPLFENGLLAAKQTEIWMKSFPLQFF
AILNEQQKTIINWQQALKLLENSPSFSEQSPNPNPDPSHSNSKPKTSQDIQETLRLLQEMQSNDQPQKGQSSKERHSW

Sequences:

>Translated_558_residues
MGFLYFQGLESNESISQLGSQAKAFAETRDLKQASQLYEKLSTQSLPDWQQALILYNWGTVKVLQQEWEAALKIFNRIAL
SSISSPQLLRSVTLNRAAARLGQAKLLSAQNDTNSLGERRYLIWQSLKELEAAKDIDCRIQKVEQNLSDCLVVPIDIHIL
QNKGVLALNQINKELKDQFFANLDLASLLAILRQSLATALHFSLFFTKQIIPHEFNAAYLKYFTFQMKTIEPLWDGLKKI
SLSDDQRKIITIAFENFTNALDASLNSNWENVQNHLQFSEDSLQKFASQSDLETLILRYRLTLLNRIDEVILKVLLDTQT
SFDKKDFLKQSSQFLKKAIEEIQINRPFISRFYVICALSEIENLQAEESEERSCKQILQQALQNAIRGNELTQLVTLSED
FANKEIMLKDVQAKQHQVIQQSLSFIPNALKEEKMNFNAGDSKIACQKQPWEQVIPLFENGLLAAKQTEIWMKSFPLQFF
AILNEQQKTIINWQQALKLLENSPSFSEQSPNPNPDPSHSNSKPKTSQDIQETLRLLQEMQSNDQPQKGQSSKERHSW
>Mature_557_residues
GFLYFQGLESNESISQLGSQAKAFAETRDLKQASQLYEKLSTQSLPDWQQALILYNWGTVKVLQQEWEAALKIFNRIALS
SISSPQLLRSVTLNRAAARLGQAKLLSAQNDTNSLGERRYLIWQSLKELEAAKDIDCRIQKVEQNLSDCLVVPIDIHILQ
NKGVLALNQINKELKDQFFANLDLASLLAILRQSLATALHFSLFFTKQIIPHEFNAAYLKYFTFQMKTIEPLWDGLKKIS
LSDDQRKIITIAFENFTNALDASLNSNWENVQNHLQFSEDSLQKFASQSDLETLILRYRLTLLNRIDEVILKVLLDTQTS
FDKKDFLKQSSQFLKKAIEEIQINRPFISRFYVICALSEIENLQAEESEERSCKQILQQALQNAIRGNELTQLVTLSEDF
ANKEIMLKDVQAKQHQVIQQSLSFIPNALKEEKMNFNAGDSKIACQKQPWEQVIPLFENGLLAAKQTEIWMKSFPLQFFA
ILNEQQKTIINWQQALKLLENSPSFSEQSPNPNPDPSHSNSKPKTSQDIQETLRLLQEMQSNDQPQKGQSSKERHSW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64076; Mature: 63945

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFLYFQGLESNESISQLGSQAKAFAETRDLKQASQLYEKLSTQSLPDWQQALILYNWGT
CCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCH
VKVLQQEWEAALKIFNRIALSSISSPQLLRSVTLNRAAARLGQAKLLSAQNDTNSLGERR
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHH
YLIWQSLKELEAAKDIDCRIQKVEQNLSDCLVVPIDIHILQNKGVLALNQINKELKDQFF
HHHHHHHHHHHHHCCHHHHHHHHHCCHHCEEEEEEEEEEECCCCEEHHHHHHHHHHHHHH
ANLDLASLLAILRQSLATALHFSLFFTKQIIPHEFNAAYLKYFTFQMKTIEPLWDGLKKI
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
SLSDDQRKIITIAFENFTNALDASLNSNWENVQNHLQFSEDSLQKFASQSDLETLILRYR
CCCCCCCEEEEEEHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LTLLNRIDEVILKVLLDTQTSFDKKDFLKQSSQFLKKAIEEIQINRPFISRFYVICALSE
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IENLQAEESEERSCKQILQQALQNAIRGNELTQLVTLSEDFANKEIMLKDVQAKQHQVIQ
HHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
QSLSFIPNALKEEKMNFNAGDSKIACQKQPWEQVIPLFENGLLAAKQTEIWMKSFPLQFF
HHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCHHHH
AILNEQQKTIINWQQALKLLENSPSFSEQSPNPNPDPSHSNSKPKTSQDIQETLRLLQEM
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
QSNDQPQKGQSSKERHSW
HCCCCCCCCCCCHHCCCC
>Mature Secondary Structure 
GFLYFQGLESNESISQLGSQAKAFAETRDLKQASQLYEKLSTQSLPDWQQALILYNWGT
CCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCH
VKVLQQEWEAALKIFNRIALSSISSPQLLRSVTLNRAAARLGQAKLLSAQNDTNSLGERR
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHH
YLIWQSLKELEAAKDIDCRIQKVEQNLSDCLVVPIDIHILQNKGVLALNQINKELKDQFF
HHHHHHHHHHHHHCCHHHHHHHHHCCHHCEEEEEEEEEEECCCCEEHHHHHHHHHHHHHH
ANLDLASLLAILRQSLATALHFSLFFTKQIIPHEFNAAYLKYFTFQMKTIEPLWDGLKKI
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
SLSDDQRKIITIAFENFTNALDASLNSNWENVQNHLQFSEDSLQKFASQSDLETLILRYR
CCCCCCCEEEEEEHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LTLLNRIDEVILKVLLDTQTSFDKKDFLKQSSQFLKKAIEEIQINRPFISRFYVICALSE
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IENLQAEESEERSCKQILQQALQNAIRGNELTQLVTLSEDFANKEIMLKDVQAKQHQVIQ
HHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
QSLSFIPNALKEEKMNFNAGDSKIACQKQPWEQVIPLFENGLLAAKQTEIWMKSFPLQFF
HHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCHHHH
AILNEQQKTIINWQQALKLLENSPSFSEQSPNPNPDPSHSNSKPKTSQDIQETLRLLQEM
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
QSNDQPQKGQSSKERHSW
HCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA