Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46445750

Identifier: 46445750

GI number: 46445750

Start: 183508

End: 185280

Strand: Reverse

Name: 46445750

Synonym: pc0116

Alternate gene names: NA

Gene position: 185280-183508 (Counterclockwise)

Preceding gene: 46445751

Following gene: 46445749

Centisome position: 7.67

GC content: 33.62

Gene sequence:

>1773_bases
ATGATCAACCCCAAAAAGGTCAATCTTCTAAAGAGAGACATTCATGGTAAAAAAATGATCAAAGCTTTATGCATTTATTT
TCTTTCCTTTATGTCAACTTTATCAGCCGTAAACATAAAGGTTGAGGCTTCTATTGATTCTCAAAACAATCAAGAAAATC
ATCCCCTTTCAGGAATAATTAGTATTACTCATCAAATTCAAGACGAAATTGATTCTAATTCATTTCAAATAGAGGGAAAG
CCTCTTTCAGTTACTTTTATTAAAAATGTAAATGTTTCTGAAGAATTACCCAAAACTATTGTATCTTTTTATCATTTCAC
TCTTTCTCCGCAAGCTAAAGGACTGTATGTTTTACCTCCTATTTCAGTTAAAATAAGAGATAAAATTCAAAGTAGCCCAC
CCAGTTCTTATGAAGTGAAAGAGCTGAAAAGTTCACTTTTAAACCCAAAAAATTCTAAATTTTCCTCTGCTTCTATACAA
TTAAAACGTTCCTCTGCTTCTAATGCTTTGATTTTCAAATTAGAGGCAAGTATTAAAGGCCCTACTTTACTGTATCCAGG
CCAACGTACCAATTTATTTTACCGCATTTCTTATAATCAAAGTGTTGAATTAACAGAGTCTCTTCTTCCTTTCATTCATG
CTGACGCCTTTAAAAAAATTGGGGATGCACATATTAGAGACTTTCAAAATGGTGAGATCACAGTGCAAGAAATTTCTCAA
GAAGTGGAAGCAAACCAAATAGGAAGTTTTAAGTTAGGGCCTTCTTCAATTTCGGGTTATAGTTACCAAACTAATTTTTT
CGGTAAGAAAAATTATCAACAGCCACTCCTCAAAGCGGAGGCTCCAGCTGTCTACTTGCAAGTAAAGCCCTTTCCTTTGG
AAAACAAACCCTATTCTTTTAATGGAGCATTGGGTGTCGTTGATGTTAAAATCAAAATGAGAACATCTTCTGAAAGACAA
TTAGAAGATAAAATTTTGATAGATATGTATATTTCTGGCGTCGAAAATCTAGAAGATTTTCGACTCCCAGATTTTTATTG
TCAGCCTGGATTTAGTGGTTTTTTTCAATTCAATGACCTCCCTCTGACAGGAGAAATAAAAGAATCTTCAAAATATTTTC
AAATCGAACTTATTCCCGTTTCTACATTTATTAATACGATTCCTTCTTTTGAAATTTCCTCTTTCGATCCTGTAACGAGC
CGCTATATCCTTAAAAGAACGGATCCTATTCCTATTGATCTTAAAACAATGCCAATGGCACCTTATCCCACAATTTCTTT
GGAAAAAGAAAATGAAATCCCCAACGAAAAAATTCTGTGGAATTCTTCTTCATGGCCACTTAGCCCTCTTGAAATCAAAG
ATTCACAAAATTTGCCTAGATTGAGCCATAATTGGACGCAAACTCCATGGATTTTATTAGTAATTCCTTTGGGAATCAGT
TGGCTAACCCTTCAATCATATTGGAAAAAATTATGGGATTTAAAGCCTAAAAAAATCAAAAAGCAAAGTTTAATTCTTTT
AGAGCAAGCTTTAAAAATCAAAAAAAACTCGGAAAAAGAAATCTTGCAGTTGCTTGAAAAAGCTACTTGGTGGAAAGTAT
GGGAAGAAGGCATTCTCCCTATAAAAGTTACTTCTTTAGAAGATCTTTCTACTCAAGGGAAAGCCGGAAAAATGAGACAG
TTTATTTACCAGTTGCAGTCTTTACAGTATGGCCCAAGTACAGGGATGGAAATAGCTGATATTAAAGTACAAGCCCAAAA
ATTATTAAGTTAA

Upstream 100 bases:

>100_bases
AGCCCTAATCCTAATCCAGATCCTTCTCATTCCAATAGTAAGCCAAAAACAAGTCAAGACATTCAAGAAACCCTTCGACT
TCTCCAAGAAATGCAATCAA

Downstream 100 bases:

>100_bases
GCTTTGAATTCATTTATTTTAAATTGAGATGATAAGGACAAAAATGACAGATCCTCAACCTTCTGTAGATGAACGAATCC
TTCTCGCTCAGGAAAGGACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 590; Mature: 590

Protein sequence:

>590_residues
MINPKKVNLLKRDIHGKKMIKALCIYFLSFMSTLSAVNIKVEASIDSQNNQENHPLSGIISITHQIQDEIDSNSFQIEGK
PLSVTFIKNVNVSEELPKTIVSFYHFTLSPQAKGLYVLPPISVKIRDKIQSSPPSSYEVKELKSSLLNPKNSKFSSASIQ
LKRSSASNALIFKLEASIKGPTLLYPGQRTNLFYRISYNQSVELTESLLPFIHADAFKKIGDAHIRDFQNGEITVQEISQ
EVEANQIGSFKLGPSSISGYSYQTNFFGKKNYQQPLLKAEAPAVYLQVKPFPLENKPYSFNGALGVVDVKIKMRTSSERQ
LEDKILIDMYISGVENLEDFRLPDFYCQPGFSGFFQFNDLPLTGEIKESSKYFQIELIPVSTFINTIPSFEISSFDPVTS
RYILKRTDPIPIDLKTMPMAPYPTISLEKENEIPNEKILWNSSSWPLSPLEIKDSQNLPRLSHNWTQTPWILLVIPLGIS
WLTLQSYWKKLWDLKPKKIKKQSLILLEQALKIKKNSEKEILQLLEKATWWKVWEEGILPIKVTSLEDLSTQGKAGKMRQ
FIYQLQSLQYGPSTGMEIADIKVQAQKLLS

Sequences:

>Translated_590_residues
MINPKKVNLLKRDIHGKKMIKALCIYFLSFMSTLSAVNIKVEASIDSQNNQENHPLSGIISITHQIQDEIDSNSFQIEGK
PLSVTFIKNVNVSEELPKTIVSFYHFTLSPQAKGLYVLPPISVKIRDKIQSSPPSSYEVKELKSSLLNPKNSKFSSASIQ
LKRSSASNALIFKLEASIKGPTLLYPGQRTNLFYRISYNQSVELTESLLPFIHADAFKKIGDAHIRDFQNGEITVQEISQ
EVEANQIGSFKLGPSSISGYSYQTNFFGKKNYQQPLLKAEAPAVYLQVKPFPLENKPYSFNGALGVVDVKIKMRTSSERQ
LEDKILIDMYISGVENLEDFRLPDFYCQPGFSGFFQFNDLPLTGEIKESSKYFQIELIPVSTFINTIPSFEISSFDPVTS
RYILKRTDPIPIDLKTMPMAPYPTISLEKENEIPNEKILWNSSSWPLSPLEIKDSQNLPRLSHNWTQTPWILLVIPLGIS
WLTLQSYWKKLWDLKPKKIKKQSLILLEQALKIKKNSEKEILQLLEKATWWKVWEEGILPIKVTSLEDLSTQGKAGKMRQ
FIYQLQSLQYGPSTGMEIADIKVQAQKLLS
>Mature_590_residues
MINPKKVNLLKRDIHGKKMIKALCIYFLSFMSTLSAVNIKVEASIDSQNNQENHPLSGIISITHQIQDEIDSNSFQIEGK
PLSVTFIKNVNVSEELPKTIVSFYHFTLSPQAKGLYVLPPISVKIRDKIQSSPPSSYEVKELKSSLLNPKNSKFSSASIQ
LKRSSASNALIFKLEASIKGPTLLYPGQRTNLFYRISYNQSVELTESLLPFIHADAFKKIGDAHIRDFQNGEITVQEISQ
EVEANQIGSFKLGPSSISGYSYQTNFFGKKNYQQPLLKAEAPAVYLQVKPFPLENKPYSFNGALGVVDVKIKMRTSSERQ
LEDKILIDMYISGVENLEDFRLPDFYCQPGFSGFFQFNDLPLTGEIKESSKYFQIELIPVSTFINTIPSFEISSFDPVTS
RYILKRTDPIPIDLKTMPMAPYPTISLEKENEIPNEKILWNSSSWPLSPLEIKDSQNLPRLSHNWTQTPWILLVIPLGIS
WLTLQSYWKKLWDLKPKKIKKQSLILLEQALKIKKNSEKEILQLLEKATWWKVWEEGILPIKVTSLEDLSTQGKAGKMRQ
FIYQLQSLQYGPSTGMEIADIKVQAQKLLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67129; Mature: 67129

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINPKKVNLLKRDIHGKKMIKALCIYFLSFMSTLSAVNIKVEASIDSQNNQENHPLSGII
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHH
SITHQIQDEIDSNSFQIEGKPLSVTFIKNVNVSEELPKTIVSFYHFTLSPQAKGLYVLPP
HHHHHHHHHCCCCCEEEECCEEEEEEEECCCCHHHHHHHHHHHHHEEECCCCCCEEEECC
ISVKIRDKIQSSPPSSYEVKELKSSLLNPKNSKFSSASIQLKRSSASNALIFKLEASIKG
CCEEEHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCC
PTLLYPGQRTNLFYRISYNQSVELTESLLPFIHADAFKKIGDAHIRDFQNGEITVQEISQ
CEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEHHHHHH
EVEANQIGSFKLGPSSISGYSYQTNFFGKKNYQQPLLKAEAPAVYLQVKPFPLENKPYSF
HHHHHHCCCEEECCCCCCCCEEEECCCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCCC
NGALGVVDVKIKMRTSSERQLEDKILIDMYISGVENLEDFRLPDFYCQPGFSGFFQFNDL
CCEEEEEEEEEEEECCCCHHHHHHEEEEHHHHCCCCHHHCCCCCCEECCCCCCEEEECCC
PLTGEIKESSKYFQIELIPVSTFINTIPSFEISSFDPVTSRYILKRTDPIPIDLKTMPMA
CCCCCCCCCCCEEEEEEEEHHHHHHCCCCCCCCCCCCHHHHHEEECCCCCCEEEEECCCC
PYPTISLEKENEIPNEKILWNSSSWPLSPLEIKDSQNLPRLSHNWTQTPWILLVIPLGIS
CCCEEEECCCCCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCH
WLTLQSYWKKLWDLKPKKIKKQSLILLEQALKIKKNSEKEILQLLEKATWWKVWEEGILP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCE
IKVTSLEDLSTQGKAGKMRQFIYQLQSLQYGPSTGMEIADIKVQAQKLLS
EEEECHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHCC
>Mature Secondary Structure
MINPKKVNLLKRDIHGKKMIKALCIYFLSFMSTLSAVNIKVEASIDSQNNQENHPLSGII
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHH
SITHQIQDEIDSNSFQIEGKPLSVTFIKNVNVSEELPKTIVSFYHFTLSPQAKGLYVLPP
HHHHHHHHHCCCCCEEEECCEEEEEEEECCCCHHHHHHHHHHHHHEEECCCCCCEEEECC
ISVKIRDKIQSSPPSSYEVKELKSSLLNPKNSKFSSASIQLKRSSASNALIFKLEASIKG
CCEEEHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCC
PTLLYPGQRTNLFYRISYNQSVELTESLLPFIHADAFKKIGDAHIRDFQNGEITVQEISQ
CEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEHHHHHH
EVEANQIGSFKLGPSSISGYSYQTNFFGKKNYQQPLLKAEAPAVYLQVKPFPLENKPYSF
HHHHHHCCCEEECCCCCCCCEEEECCCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCCC
NGALGVVDVKIKMRTSSERQLEDKILIDMYISGVENLEDFRLPDFYCQPGFSGFFQFNDL
CCEEEEEEEEEEEECCCCHHHHHHEEEEHHHHCCCCHHHCCCCCCEECCCCCCEEEECCC
PLTGEIKESSKYFQIELIPVSTFINTIPSFEISSFDPVTSRYILKRTDPIPIDLKTMPMA
CCCCCCCCCCCEEEEEEEEHHHHHHCCCCCCCCCCCCHHHHHEEECCCCCCEEEEECCCC
PYPTISLEKENEIPNEKILWNSSSWPLSPLEIKDSQNLPRLSHNWTQTPWILLVIPLGIS
CCCEEEECCCCCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCH
WLTLQSYWKKLWDLKPKKIKKQSLILLEQALKIKKNSEKEILQLLEKATWWKVWEEGILP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCE
IKVTSLEDLSTQGKAGKMRQFIYQLQSLQYGPSTGMEIADIKVQAQKLLS
EEEECHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA