| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46445749
Identifier: 46445749
GI number: 46445749
Start: 183087
End: 183464
Strand: Reverse
Name: 46445749
Synonym: pc0115
Alternate gene names: NA
Gene position: 183464-183087 (Counterclockwise)
Preceding gene: 46445750
Following gene: 46445748
Centisome position: 7.6
GC content: 35.71
Gene sequence:
>378_bases ATGACAGATCCTCAACCTTCTGTAGATGAACGAATCCTTCTCGCTCAGGAAAGGACTCGTTTAGCTGCCGAAAGGACTTT TTTAGCATGGCTTAGGACTGGGTTAACTGGTATTGGAATAGGGATTGCAATTGCGCGATTTGTTTTTTTTCAAACTACCT CTCACCAAAAAACAGCTCATCTAATGGGACAGTTCCTTATTTTATGGGGAATTTGTATTTTTCTTTTTGCTTTAAATAGT TATCGGAAAAGTCTGAAAAAAATTGGTTTTTCAAATCCTATTTCAGACCACCCTTCATTCTTCGGTTTAGGTTTAATTAC AGCAGCTTTGATTCTTTTTTCTTTCATTCTCTTTTGGATTATTATAGATAAACCATGA
Upstream 100 bases:
>100_bases AGTACAGGGATGGAAATAGCTGATATTAAAGTACAAGCCCAAAAATTATTAAGTTAAGCTTTGAATTCATTTATTTTAAA TTGAGATGATAAGGACAAAA
Downstream 100 bases:
>100_bases TGTTTCTTGTAAGTTTCCTTTTCTTCTTTTTTCCTTTAGAAGCTTATCAAGAAGCCTCGCTCCAACAGGCCAATCAATAC TATGAAAATGGCCTGCGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MTDPQPSVDERILLAQERTRLAAERTFLAWLRTGLTGIGIGIAIARFVFFQTTSHQKTAHLMGQFLILWGICIFLFALNS YRKSLKKIGFSNPISDHPSFFGLGLITAALILFSFILFWIIIDKP
Sequences:
>Translated_125_residues MTDPQPSVDERILLAQERTRLAAERTFLAWLRTGLTGIGIGIAIARFVFFQTTSHQKTAHLMGQFLILWGICIFLFALNS YRKSLKKIGFSNPISDHPSFFGLGLITAALILFSFILFWIIIDKP >Mature_124_residues TDPQPSVDERILLAQERTRLAAERTFLAWLRTGLTGIGIGIAIARFVFFQTTSHQKTAHLMGQFLILWGICIFLFALNSY RKSLKKIGFSNPISDHPSFFGLGLITAALILFSFILFWIIIDKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14130; Mature: 13999
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPQPSVDERILLAQERTRLAAERTFLAWLRTGLTGIGIGIAIARFVFFQTTSHQKTAH CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHH LMGQFLILWGICIFLFALNSYRKSLKKIGFSNPISDHPSFFGLGLITAALILFSFILFWI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH IIDKP HHCCC >Mature Secondary Structure TDPQPSVDERILLAQERTRLAAERTFLAWLRTGLTGIGIGIAIARFVFFQTTSHQKTAH CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHH LMGQFLILWGICIFLFALNSYRKSLKKIGFSNPISDHPSFFGLGLITAALILFSFILFWI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH IIDKP HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA