| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is glgP [H]
Identifier: 46445740
GI number: 46445740
Start: 169878
End: 172481
Strand: Direct
Name: glgP [H]
Synonym: pc0106
Alternate gene names: 46445740
Gene position: 169878-172481 (Clockwise)
Preceding gene: 46445734
Following gene: 46445743
Centisome position: 7.04
GC content: 36.75
Gene sequence:
>2604_bases TTGGTAACTAGTTTTGAATTTTTCTATTTTAGAAAGGGGGATTTCATGAGTACAGTAAATATAGATTTACTAGCTGAAGA ATTAATTCGCAGAGTCAAATCTTATTTAATTAGTACGATTGGAAGAACAGCAGAAGAGGCCGATGCTAATGAATTTTATC GAGCTTTATGCTATGCGATCAGGGAAGAAACAATGATTAATTGGCAGGCGACAGCTCGTACAATTGCCAAAAATCAATCT CGCCAAATTTATTATCTCTCGATGGAATACTTACCTGGAAGACTTTTTGTGAATAATATCACAAATTTATGTTCAAAAGA TGTTGTTAAGCTTGTCTTACAGAAAATGAATCGGAATTTAAGAAGCATTGTTGAGCAAGAGGAAGACCCTGGTTTAGGTA ATGGCGGTCTTGGTCGCTTAGCCTCTTGTTTACTCGATTCTTTAGCCACGCATCACTATCCTGCTCAGGCTTATGGTTTG CGTTATCAATATGGAATTTTTGAGCAACAACTTTGGAATGGCGCACAAATTGAAGCTCCCGATTGCTGGCTTTTAAATGA AAATCCTTGGGAATTTAGACGGGATTTAAGAAGAGTGCATGTCAAGTTTTGTGGAAAACCTCAAACAACGTACAATATCC ATGGGGATGAAATTTTAAGCCTCACAGAGGCTGAAGAAGTAGGGGCTCTTCCTTATGATATACCAATTGTTGGTTATAGC AAAAACTCTAATTTCTCAGTTGTGACCTTACGTCTATGGTCTACTAAAGATTCTCCGCGGAATTTTCTGTTACAAAAGTA TAATGCAGGGAGGCTTGATCAAGCAGCAGAAAATACGACTTTAACTGATGTATTATATCCAAGTGATAACAATGATATTG GAAAAAGGATCCGATTAAAACAAGAATTTTTGTTAGTTTCAGCCTCGCTACAGGATATTGTTCGCCATCACTTGGCGCAA TATAACAATTTAAGGCAATTTGCCGATAAAGTACGCATTCAGATCAATGATACTCATCCCTCACTAGTCATTGCAGAGCT GGTTCGCATTTTAACTAAAGATCATGATTTACCTTGGAAAACAGCAGTCGAAATCACAGAGGCTTGCACAGGTTATACGA ACCATACGATATTGAGTGAGGCGCTAGAGCAATGGGATAAAGCTCTTTTCTATTACTTACTTCCACGTCAATGTCGAATT ATAGAACGAATCAATCTCGATTTTTGTAATGCGATTAGAAGTCGCTATCCTCAAGACGAAGAACGAATCAGACGATTATC CATCATCGAAAATGATAAAGTACGAATGGCAAATTTAGCCATTGTAGGCTCGCATAAAGTCAATGGAGTAGCAAAACTTC ATACGGAGATTTTAAAAAATTCGGTTTTTAAAGATTTTTATGAATTTTTTCCTGATAAGTTTGTTAATATTACAAATGGG GTTACCCAAAGACGTTGGTTATTGGAATGTAATCCTGAATTAGCTAGATTTATTACTCAAAGGATTGGTGACAAATGGAT TACAGATTTTTTGACAATTAAAGAATTAGCGAAGTTTGCCTCAGATCCAGAATCGCAACTGGAATTTCTAGCGATTAAAA AGAAAAATAAATTTAAGTTTATAGAATATATCAATAGAGAAAATCGTTTGAGGGATGCAAATGGAATTATTATTTCTCCT CCTCCTCTCCTCGATGTTGATTCAATTTTTGATGTCCAAATCAAGCGAATTCATGAGTATAAAAGACAACTTATGAATGC GTTACACTTAATCATGCTTTATCAAGAGATCACACAAAATCCCAATCATCAAAGAATCAAACGCACGGTCGTGATTGGGG GAAAGGCAGCTGCTGGTTATGAAACTGCAAAAGATATTATTCGGTTGATCTATTGTATTGCTCGGAAAGTTAACCAGGAT CCAATTGTAGGACCATTTTTAAAAATTGTCTATTTAGAAAATTACAATGTAACTAAAGCCGAAATCGTTATTCCTGCATC AGATCTTTCAGAGCAAATTTCTACAGCTGGGACAGAAGCGTCTGGAACGGGTAATATGAAAATGGCTATGAACGGGGCAT TGACAATTGGAACGCAAGATGGCGCCAACATCGAAATGGAAGAAGAGGTCACTCCTGAGTGGTGGCCTTTTTCTTTTGGC TGTACAGCAGAGCAAATTGCCCAATTAAAAATGACAAATTCTTATTCTTCGAAAGAAATTTATGATAATAATCCCGCAAT CAAAAAAGCTGTGGATGCTTTAAGAGATCGCTCTTTTGCTCAAACAGAAGAAGAGCATCAAATATTTAGTGATCTTTATC ATAAACTAATCGAAATGCACTACGGAGGTGCTCCTGATCGCTATTTCATGTTAAAAGACCTTCAAAGTTTTTATGATACA CAGCTGAAAGTGGAAGAATTATATAAAAAACCGAAAAAGTGGGCTGAATATGCCATACATAATATTGCTGGGATGGGAAA ATTTTCTACTGATTTTTCGGTTCATAACTATGCAGCACTGATTTGGGGAATTGAGCCTTGTCCAATTGATCAAGAGCTCT TAGATCGTGTGCGCTACGATTATGCAGCGCACAATCGATGCTGA
Upstream 100 bases:
>100_bases CAAAATTCCATAAAAGACAAATTGAAATTTTTGAGAGCGGTGCATTTTTTTAAACCTTCAATACTCGCTGATAAATAGAT CATATGCTAAGTTAAAATTT
Downstream 100 bases:
>100_bases AGGAACTTCAGCATCGATAAGGTGAGGGTTATGCAATGATTTCGCTATACGGAAGACCCATGGCTTTTAATGTCACAATT AATTCCATGTATCTTTCTTT
Product: glycogen phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 867; Mature: 867
Protein sequence:
>867_residues MVTSFEFFYFRKGDFMSTVNIDLLAEELIRRVKSYLISTIGRTAEEADANEFYRALCYAIREETMINWQATARTIAKNQS RQIYYLSMEYLPGRLFVNNITNLCSKDVVKLVLQKMNRNLRSIVEQEEDPGLGNGGLGRLASCLLDSLATHHYPAQAYGL RYQYGIFEQQLWNGAQIEAPDCWLLNENPWEFRRDLRRVHVKFCGKPQTTYNIHGDEILSLTEAEEVGALPYDIPIVGYS KNSNFSVVTLRLWSTKDSPRNFLLQKYNAGRLDQAAENTTLTDVLYPSDNNDIGKRIRLKQEFLLVSASLQDIVRHHLAQ YNNLRQFADKVRIQINDTHPSLVIAELVRILTKDHDLPWKTAVEITEACTGYTNHTILSEALEQWDKALFYYLLPRQCRI IERINLDFCNAIRSRYPQDEERIRRLSIIENDKVRMANLAIVGSHKVNGVAKLHTEILKNSVFKDFYEFFPDKFVNITNG VTQRRWLLECNPELARFITQRIGDKWITDFLTIKELAKFASDPESQLEFLAIKKKNKFKFIEYINRENRLRDANGIIISP PPLLDVDSIFDVQIKRIHEYKRQLMNALHLIMLYQEITQNPNHQRIKRTVVIGGKAAAGYETAKDIIRLIYCIARKVNQD PIVGPFLKIVYLENYNVTKAEIVIPASDLSEQISTAGTEASGTGNMKMAMNGALTIGTQDGANIEMEEEVTPEWWPFSFG CTAEQIAQLKMTNSYSSKEIYDNNPAIKKAVDALRDRSFAQTEEEHQIFSDLYHKLIEMHYGGAPDRYFMLKDLQSFYDT QLKVEELYKKPKKWAEYAIHNIAGMGKFSTDFSVHNYAALIWGIEPCPIDQELLDRVRYDYAAHNRC
Sequences:
>Translated_867_residues MVTSFEFFYFRKGDFMSTVNIDLLAEELIRRVKSYLISTIGRTAEEADANEFYRALCYAIREETMINWQATARTIAKNQS RQIYYLSMEYLPGRLFVNNITNLCSKDVVKLVLQKMNRNLRSIVEQEEDPGLGNGGLGRLASCLLDSLATHHYPAQAYGL RYQYGIFEQQLWNGAQIEAPDCWLLNENPWEFRRDLRRVHVKFCGKPQTTYNIHGDEILSLTEAEEVGALPYDIPIVGYS KNSNFSVVTLRLWSTKDSPRNFLLQKYNAGRLDQAAENTTLTDVLYPSDNNDIGKRIRLKQEFLLVSASLQDIVRHHLAQ YNNLRQFADKVRIQINDTHPSLVIAELVRILTKDHDLPWKTAVEITEACTGYTNHTILSEALEQWDKALFYYLLPRQCRI IERINLDFCNAIRSRYPQDEERIRRLSIIENDKVRMANLAIVGSHKVNGVAKLHTEILKNSVFKDFYEFFPDKFVNITNG VTQRRWLLECNPELARFITQRIGDKWITDFLTIKELAKFASDPESQLEFLAIKKKNKFKFIEYINRENRLRDANGIIISP PPLLDVDSIFDVQIKRIHEYKRQLMNALHLIMLYQEITQNPNHQRIKRTVVIGGKAAAGYETAKDIIRLIYCIARKVNQD PIVGPFLKIVYLENYNVTKAEIVIPASDLSEQISTAGTEASGTGNMKMAMNGALTIGTQDGANIEMEEEVTPEWWPFSFG CTAEQIAQLKMTNSYSSKEIYDNNPAIKKAVDALRDRSFAQTEEEHQIFSDLYHKLIEMHYGGAPDRYFMLKDLQSFYDT QLKVEELYKKPKKWAEYAIHNIAGMGKFSTDFSVHNYAALIWGIEPCPIDQELLDRVRYDYAAHNRC >Mature_867_residues MVTSFEFFYFRKGDFMSTVNIDLLAEELIRRVKSYLISTIGRTAEEADANEFYRALCYAIREETMINWQATARTIAKNQS RQIYYLSMEYLPGRLFVNNITNLCSKDVVKLVLQKMNRNLRSIVEQEEDPGLGNGGLGRLASCLLDSLATHHYPAQAYGL RYQYGIFEQQLWNGAQIEAPDCWLLNENPWEFRRDLRRVHVKFCGKPQTTYNIHGDEILSLTEAEEVGALPYDIPIVGYS KNSNFSVVTLRLWSTKDSPRNFLLQKYNAGRLDQAAENTTLTDVLYPSDNNDIGKRIRLKQEFLLVSASLQDIVRHHLAQ YNNLRQFADKVRIQINDTHPSLVIAELVRILTKDHDLPWKTAVEITEACTGYTNHTILSEALEQWDKALFYYLLPRQCRI IERINLDFCNAIRSRYPQDEERIRRLSIIENDKVRMANLAIVGSHKVNGVAKLHTEILKNSVFKDFYEFFPDKFVNITNG VTQRRWLLECNPELARFITQRIGDKWITDFLTIKELAKFASDPESQLEFLAIKKKNKFKFIEYINRENRLRDANGIIISP PPLLDVDSIFDVQIKRIHEYKRQLMNALHLIMLYQEITQNPNHQRIKRTVVIGGKAAAGYETAKDIIRLIYCIARKVNQD PIVGPFLKIVYLENYNVTKAEIVIPASDLSEQISTAGTEASGTGNMKMAMNGALTIGTQDGANIEMEEEVTPEWWPFSFG CTAEQIAQLKMTNSYSSKEIYDNNPAIKKAVDALRDRSFAQTEEEHQIFSDLYHKLIEMHYGGAPDRYFMLKDLQSFYDT QLKVEELYKKPKKWAEYAIHNIAGMGKFSTDFSVHNYAALIWGIEPCPIDQELLDRVRYDYAAHNRC
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI5032009, Length=836, Percent_Identity=43.421052631579, Blast_Score=626, Evalue=1e-179, Organism=Homo sapiens, GI21361370, Length=835, Percent_Identity=43.2335329341317, Blast_Score=625, Evalue=1e-179, Organism=Homo sapiens, GI71037379, Length=842, Percent_Identity=42.9928741092637, Blast_Score=615, Evalue=1e-176, Organism=Homo sapiens, GI255653002, Length=728, Percent_Identity=44.9175824175824, Blast_Score=591, Evalue=1e-168, Organism=Homo sapiens, GI257900462, Length=694, Percent_Identity=44.8126801152738, Blast_Score=560, Evalue=1e-159, Organism=Escherichia coli, GI2367228, Length=832, Percent_Identity=41.3461538461538, Blast_Score=593, Evalue=1e-170, Organism=Escherichia coli, GI48994936, Length=822, Percent_Identity=39.7810218978102, Blast_Score=568, Evalue=1e-163, Organism=Caenorhabditis elegans, GI32566204, Length=830, Percent_Identity=44.2168674698795, Blast_Score=631, Evalue=0.0, Organism=Caenorhabditis elegans, GI17564550, Length=830, Percent_Identity=44.2168674698795, Blast_Score=631, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325418, Length=864, Percent_Identity=38.1944444444444, Blast_Score=546, Evalue=1e-156, Organism=Drosophila melanogaster, GI78706832, Length=837, Percent_Identity=43.010752688172, Blast_Score=628, Evalue=1e-180, Organism=Drosophila melanogaster, GI24581010, Length=837, Percent_Identity=43.010752688172, Blast_Score=628, Evalue=1e-180,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 100206; Mature: 100206
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTSFEFFYFRKGDFMSTVNIDLLAEELIRRVKSYLISTIGRTAEEADANEFYRALCYAI CCCEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHH REETMINWQATARTIAKNQSRQIYYLSMEYLPGRLFVNNITNLCSKDVVKLVLQKMNRNL HHHHEEEHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCHHH RSIVEQEEDPGLGNGGLGRLASCLLDSLATHHYPAQAYGLRYQYGIFEQQLWNGAQIEAP HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCEEECCHHHHHHCCCCCCCCC DCWLLNENPWEFRRDLRRVHVKFCGKPQTTYNIHGDEILSLTEAEEVGALPYDIPIVGYS CEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEECCHHHEEHHHHHHHCCCCCCCEEEEEC KNSNFSVVTLRLWSTKDSPRNFLLQKYNAGRLDQAAENTTLTDVLYPSDNNDIGKRIRLK CCCCEEEEEEEEECCCCCHHHHHHHHCCCCCCCHHHCCCEEEEEEECCCCCCHHHHHHHH QEFLLVSASLQDIVRHHLAQYNNLRQFADKVRIQINDTHPSLVIAELVRILTKDHDLPWK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHCCCCCCHH TAVEITEACTGYTNHTILSEALEQWDKALFYYLLPRQCRIIERINLDFCNAIRSRYPQDE HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHCCCCH ERIRRLSIIENDKVRMANLAIVGSHKVNGVAKLHTEILKNSVFKDFYEFFPDKFVNITNG HHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCC VTQRRWLLECNPELARFITQRIGDKWITDFLTIKELAKFASDPESQLEFLAIKKKNKFKF CHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEECCCCCHH IEYINRENRLRDANGIIISPPPLLDVDSIFDVQIKRIHEYKRQLMNALHLIMLYQEITQN HHHHCHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PNHQRIKRTVVIGGKAAAGYETAKDIIRLIYCIARKVNQDPIVGPFLKIVYLENYNVTKA CCHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEE EIVIPASDLSEQISTAGTEASGTGNMKMAMNGALTIGTQDGANIEMEEEVTPEWWPFSFG EEEEEHHHHHHHHHHCCCCCCCCCCEEEEECCEEEEECCCCCCEEECCCCCCCCCCCCCC CTAEQIAQLKMTNSYSSKEIYDNNPAIKKAVDALRDRSFAQTEEEHQIFSDLYHKLIEMH CCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHH YGGAPDRYFMLKDLQSFYDTQLKVEELYKKPKKWAEYAIHNIAGMGKFSTDFSVHNYAAL CCCCCCHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHEEEE IWGIEPCPIDQELLDRVRYDYAAHNRC EECCCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVTSFEFFYFRKGDFMSTVNIDLLAEELIRRVKSYLISTIGRTAEEADANEFYRALCYAI CCCEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHH REETMINWQATARTIAKNQSRQIYYLSMEYLPGRLFVNNITNLCSKDVVKLVLQKMNRNL HHHHEEEHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCHHH RSIVEQEEDPGLGNGGLGRLASCLLDSLATHHYPAQAYGLRYQYGIFEQQLWNGAQIEAP HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCEEECCHHHHHHCCCCCCCCC DCWLLNENPWEFRRDLRRVHVKFCGKPQTTYNIHGDEILSLTEAEEVGALPYDIPIVGYS CEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEECCHHHEEHHHHHHHCCCCCCCEEEEEC KNSNFSVVTLRLWSTKDSPRNFLLQKYNAGRLDQAAENTTLTDVLYPSDNNDIGKRIRLK CCCCEEEEEEEEECCCCCHHHHHHHHCCCCCCCHHHCCCEEEEEEECCCCCCHHHHHHHH QEFLLVSASLQDIVRHHLAQYNNLRQFADKVRIQINDTHPSLVIAELVRILTKDHDLPWK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHCCCCCCHH TAVEITEACTGYTNHTILSEALEQWDKALFYYLLPRQCRIIERINLDFCNAIRSRYPQDE HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHCCCCH ERIRRLSIIENDKVRMANLAIVGSHKVNGVAKLHTEILKNSVFKDFYEFFPDKFVNITNG HHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCC VTQRRWLLECNPELARFITQRIGDKWITDFLTIKELAKFASDPESQLEFLAIKKKNKFKF CHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEECCCCCHH IEYINRENRLRDANGIIISPPPLLDVDSIFDVQIKRIHEYKRQLMNALHLIMLYQEITQN HHHHCHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PNHQRIKRTVVIGGKAAAGYETAKDIIRLIYCIARKVNQDPIVGPFLKIVYLENYNVTKA CCHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEE EIVIPASDLSEQISTAGTEASGTGNMKMAMNGALTIGTQDGANIEMEEEVTPEWWPFSFG EEEEEHHHHHHHHHHCCCCCCCCCCEEEEECCEEEEECCCCCCEEECCCCCCCCCCCCCC CTAEQIAQLKMTNSYSSKEIYDNNPAIKKAVDALRDRSFAQTEEEHQIFSDLYHKLIEMH CCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHH YGGAPDRYFMLKDLQSFYDTQLKVEELYKKPKKWAEYAIHNIAGMGKFSTDFSVHNYAAL CCCCCCHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHEEEE IWGIEPCPIDQELLDRVRYDYAAHNRC EECCCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]