Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46445734

Identifier: 46445734

GI number: 46445734

Start: 162813

End: 163391

Strand: Direct

Name: 46445734

Synonym: pc0100

Alternate gene names: NA

Gene position: 162813-163391 (Clockwise)

Preceding gene: 46445733

Following gene: 46445740

Centisome position: 6.74

GC content: 35.92

Gene sequence:

>579_bases
ATGTCTAAAATTTCTCTACCATCAACGCGCTTGTTATTTAAGCTAGGGCTAGGCTTTTTAGCTACTTTACTTTTATTCGC
AAGAATTGGTTATAGTTATGGTCAAACGAATCATTCTATATCTGATGCAATTTTGCAAGGATCTATTCAAATCCAAGCCT
CTAAACTCATCGATCCAAATTCCTCAGAAAAAGTTCAGCCAGGAACTCCTGTTCAACTATCTGTTATTGTTGAAAATAAG
GGATCTCAAGCAAGCCCTAAAGGTGATATCTATTTGTGCTATGGATTTGCAAAACCTTTAGATAAAGAAAATGGCAGCAT
TCTTTTCCAGACTGAAAAACAAACATTTCCTTCGATTGATCCGGGTAAAAGCGTGATTATTTCTTTTTCTACCCCTCATC
TACTGCCTTCCATTTTAGATTTTGTGCGAAATGATTGGACGCTACGAGAATATCAAGCTATTGCTGTTCTTAATGGAGAA
GAGCATTTGATTGGTTCACTTGCAATGACATTTTCAGCTTATTATTATCCAGGAATGCATAAGGAATTTCCAACAATAAT
TTCTGTTCCTTTACCCTAG

Upstream 100 bases:

>100_bases
GTTCCTATTGGAGCTTTGTTAGCAATTATATTGATTTATCCGATCCAAGCAATATTTGGATAAATAGACAAGAGAATTGG
TTTAATCGAAGGAGATAAAA

Downstream 100 bases:

>100_bases
TCGTAGGCACCCTGAGTTAGTTAAGACGATTGTACCTAATTTGTTCGTTAAAGATATTTGAACAAATAACACAATTAGAG
TGATTTATTCAATATCAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MSKISLPSTRLLFKLGLGFLATLLLFARIGYSYGQTNHSISDAILQGSIQIQASKLIDPNSSEKVQPGTPVQLSVIVENK
GSQASPKGDIYLCYGFAKPLDKENGSILFQTEKQTFPSIDPGKSVIISFSTPHLLPSILDFVRNDWTLREYQAIAVLNGE
EHLIGSLAMTFSAYYYPGMHKEFPTIISVPLP

Sequences:

>Translated_192_residues
MSKISLPSTRLLFKLGLGFLATLLLFARIGYSYGQTNHSISDAILQGSIQIQASKLIDPNSSEKVQPGTPVQLSVIVENK
GSQASPKGDIYLCYGFAKPLDKENGSILFQTEKQTFPSIDPGKSVIISFSTPHLLPSILDFVRNDWTLREYQAIAVLNGE
EHLIGSLAMTFSAYYYPGMHKEFPTIISVPLP
>Mature_191_residues
SKISLPSTRLLFKLGLGFLATLLLFARIGYSYGQTNHSISDAILQGSIQIQASKLIDPNSSEKVQPGTPVQLSVIVENKG
SQASPKGDIYLCYGFAKPLDKENGSILFQTEKQTFPSIDPGKSVIISFSTPHLLPSILDFVRNDWTLREYQAIAVLNGEE
HLIGSLAMTFSAYYYPGMHKEFPTIISVPLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21095; Mature: 20963

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKISLPSTRLLFKLGLGFLATLLLFARIGYSYGQTNHSISDAILQGSIQIQASKLIDPN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCEEEEEEECCCCC
SSEKVQPGTPVQLSVIVENKGSQASPKGDIYLCYGFAKPLDKENGSILFQTEKQTFPSID
CCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCC
PGKSVIISFSTPHLLPSILDFVRNDWTLREYQAIAVLNGEEHLIGSLAMTFSAYYYPGMH
CCCEEEEEECCCHHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCC
KEFPTIISVPLP
CCCCCEEEECCC
>Mature Secondary Structure 
SKISLPSTRLLFKLGLGFLATLLLFARIGYSYGQTNHSISDAILQGSIQIQASKLIDPN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCEEEEEEECCCCC
SSEKVQPGTPVQLSVIVENKGSQASPKGDIYLCYGFAKPLDKENGSILFQTEKQTFPSID
CCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCC
PGKSVIISFSTPHLLPSILDFVRNDWTLREYQAIAVLNGEEHLIGSLAMTFSAYYYPGMH
CCCEEEEEECCCHHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCC
KEFPTIISVPLP
CCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA