| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is bcp [H]
Identifier: 46445725
GI number: 46445725
Start: 151673
End: 152161
Strand: Reverse
Name: bcp [H]
Synonym: pc0091
Alternate gene names: 46445725
Gene position: 152161-151673 (Counterclockwise)
Preceding gene: 46445727
Following gene: 46445720
Centisome position: 6.3
GC content: 33.54
Gene sequence:
>489_bases ATGAATCTTCCCGTTTCAGTCCGGCAACAAGTGCCTTCATTCAAAGCATTTGATGAACAAAATCAACTCTTTTCTTCAAC TAATTTATTGGGGCAAATTTATGTTCTATATTTTTATCCCAAAGATGATACCCCTGGCTGTACGTTGCAAGCTTGCCAAT TTAGAGATATCAAAACTTCTTTCGAAAAATTTGAAACACGTATTATTGGAATTAGCCCCGATTCCTTAAAATCACATGAA AAATTTAGTCACAAGTATCAACTCAATTTTACTTTACTGAGCGATTCTTCCCATGAAATGTGTGACTTATTTGGAGTTTG GCAAGAAAAAAAAATCTTTGGTAAAACAAAAATGGGAGTTATACGATCTACTTTCATCGTAGATGCTAAAGGTTTAATAA GATGGATTGAAAGTCCTGCTCAAGTTGATGGACATGCTGAACGTGTTTTAAAGGCAATTCAAATATTAAAGAATGGTGAA ATGATATGA
Upstream 100 bases:
>100_bases TTAAATTTAAAAATAAACGAATATGTGTTTTTTTTGATTTAATATTATAATAAATCCAAAGTTTAGGTTAATAATCAAGA AAATTTTTTAGGATCAAATT
Downstream 100 bases:
>100_bases CCTCTTCTTTTCCCATTAGTGTCACTATTTTAACAAAAAATAGCCAAAAATATCTAAGAGAAGTCCTACAAGCTTTGGAA GATTTTGATGAGGTTGTAAT
Product: putative bacterioferritin comigratory protein (BCP)
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MNLPVSVRQQVPSFKAFDEQNQLFSSTNLLGQIYVLYFYPKDDTPGCTLQACQFRDIKTSFEKFETRIIGISPDSLKSHE KFSHKYQLNFTLLSDSSHEMCDLFGVWQEKKIFGKTKMGVIRSTFIVDAKGLIRWIESPAQVDGHAERVLKAIQILKNGE MI
Sequences:
>Translated_162_residues MNLPVSVRQQVPSFKAFDEQNQLFSSTNLLGQIYVLYFYPKDDTPGCTLQACQFRDIKTSFEKFETRIIGISPDSLKSHE KFSHKYQLNFTLLSDSSHEMCDLFGVWQEKKIFGKTKMGVIRSTFIVDAKGLIRWIESPAQVDGHAERVLKAIQILKNGE MI >Mature_162_residues MNLPVSVRQQVPSFKAFDEQNQLFSSTNLLGQIYVLYFYPKDDTPGCTLQACQFRDIKTSFEKFETRIIGISPDSLKSHE KFSHKYQLNFTLLSDSSHEMCDLFGVWQEKKIFGKTKMGVIRSTFIVDAKGLIRWIESPAQVDGHAERVLKAIQILKNGE MI
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=151, Percent_Identity=38.4105960264901, Blast_Score=116, Evalue=6e-28, Organism=Saccharomyces cerevisiae, GI6322180, Length=124, Percent_Identity=37.0967741935484, Blast_Score=72, Evalue=4e-14,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 18600; Mature: 18600
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLPVSVRQQVPSFKAFDEQNQLFSSTNLLGQIYVLYFYPKDDTPGCTLQACQFRDIKTS CCCCCHHHHCCCCCHHCCHHHHHHHHHCCEEEEEEEEEEECCCCCCCEEEECCCHHHHHH FEKFETRIIGISPDSLKSHEKFSHKYQLNFTLLSDSSHEMCDLFGVWQEKKIFGKTKMGV HHHHHEEEEEECCHHHHHHHHCCEEEEEEEEEECCCCHHHHHHHHCHHHHHHHCCHHHHH IRSTFIVDAKGLIRWIESPAQVDGHAERVLKAIQILKNGEMI HHHHHEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNLPVSVRQQVPSFKAFDEQNQLFSSTNLLGQIYVLYFYPKDDTPGCTLQACQFRDIKTS CCCCCHHHHCCCCCHHCCHHHHHHHHHCCEEEEEEEEEEECCCCCCCEEEECCCHHHHHH FEKFETRIIGISPDSLKSHEKFSHKYQLNFTLLSDSSHEMCDLFGVWQEKKIFGKTKMGV HHHHHEEEEEECCHHHHHHHHCCEEEEEEEEEECCCCHHHHHHHHCHHHHHHHCCHHHHH IRSTFIVDAKGLIRWIESPAQVDGHAERVLKAIQILKNGEMI HHHHHEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]