| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46445721
Identifier: 46445721
GI number: 46445721
Start: 147770
End: 148210
Strand: Direct
Name: 46445721
Synonym: pc0087
Alternate gene names: NA
Gene position: 147770-148210 (Clockwise)
Preceding gene: 46445715
Following gene: 46445722
Centisome position: 6.12
GC content: 35.37
Gene sequence:
>441_bases GTGATTATGGCTCTCCCAGATAAGTCAAAAAGCAAAAAAAAAGAATCCACTCTTTTTGGATTAGAAAATAAATCTAGTCC TTTAACCGAGTTGGATCAATTCGACCCCGATAAAATGACGCTTTCAGATGTGGAAAACATGATTTCTAAGGTGAAAATTT TACATGATGAAATTGATCGAAAGCTAGATGATATTTTTCAAAAATCGGGTTGGACTTCTAAACAGATTAAAACTTATTTA GATAATCCCAATAATTTTACCGTGGATGAATGGGAAAAAGTTCAAAGAGACCGTCAAAAATTGATGAACACTCTAAAAAC AGGAAAAGATTTACAAGCAGCTTCCATTTCAAATGCGAAGACAGAGCAAAACTCAAAATTAACGCGAGAGCGTCGGGGCA AAACGATTGGAGCTCGCCGTAATTGGATTTCCATGCAATAA
Upstream 100 bases:
>100_bases GAAAAAAAGTTAAGAAAAAAATATTTTATCAAATTTTCGATTTGAGCTATGTATCAAATAATTTTTTTATGTTAAGCTAT AAATTGATACAAGCATTGAG
Downstream 100 bases:
>100_bases GATAGAGTGTTTTTTTATTCCTATTAGGTGAAGCAGTAGCTAAGCGTGGATTTGAGGATCTTAAATAAGCGGGACTAAAT TTTAGCGAGATTTTCAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MIMALPDKSKSKKKESTLFGLENKSSPLTELDQFDPDKMTLSDVENMISKVKILHDEIDRKLDDIFQKSGWTSKQIKTYL DNPNNFTVDEWEKVQRDRQKLMNTLKTGKDLQAASISNAKTEQNSKLTRERRGKTIGARRNWISMQ
Sequences:
>Translated_146_residues MIMALPDKSKSKKKESTLFGLENKSSPLTELDQFDPDKMTLSDVENMISKVKILHDEIDRKLDDIFQKSGWTSKQIKTYL DNPNNFTVDEWEKVQRDRQKLMNTLKTGKDLQAASISNAKTEQNSKLTRERRGKTIGARRNWISMQ >Mature_146_residues MIMALPDKSKSKKKESTLFGLENKSSPLTELDQFDPDKMTLSDVENMISKVKILHDEIDRKLDDIFQKSGWTSKQIKTYL DNPNNFTVDEWEKVQRDRQKLMNTLKTGKDLQAASISNAKTEQNSKLTRERRGKTIGARRNWISMQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16936; Mature: 16936
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMALPDKSKSKKKESTLFGLENKSSPLTELDQFDPDKMTLSDVENMISKVKILHDEIDR CEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH KLDDIFQKSGWTSKQIKTYLDNPNNFTVDEWEKVQRDRQKLMNTLKTGKDLQAASISNAK HHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCH TEQNSKLTRERRGKTIGARRNWISMQ HHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MIMALPDKSKSKKKESTLFGLENKSSPLTELDQFDPDKMTLSDVENMISKVKILHDEIDR CEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH KLDDIFQKSGWTSKQIKTYLDNPNNFTVDEWEKVQRDRQKLMNTLKTGKDLQAASISNAK HHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCH TEQNSKLTRERRGKTIGARRNWISMQ HHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA