Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46445715

Identifier: 46445715

GI number: 46445715

Start: 139592

End: 140242

Strand: Direct

Name: 46445715

Synonym: pc0081

Alternate gene names: NA

Gene position: 139592-140242 (Clockwise)

Preceding gene: 46445714

Following gene: 46445721

Centisome position: 5.78

GC content: 31.95

Gene sequence:

>651_bases
ATGCATCGTTTAACACTTTGGTTGGTTTGTACAGCTATTTTGATTTTAACCAGTTGCCAAACAAAAGTGATAGGAACTGG
TCCTTGGGTAAAAAAAATTGATTCTGAAGAATTATCAAAAATTGTGATTAGTTTTTCGGCTAAGATGAAAATAGATAAAC
ATTTAGAGTTAGAAGATTCGTGGGTATCTTATGAAGATTATATCAAAAAATTGTCTTTACATTATTCTTCTCAGAGACTT
TTAACTGTTTATGACGCTCGTCTCTTATTGGTAGAATTGGTTGAAGAGCTTCTTTATAGAATTAATAATAATTCTATTAT
TAGCTACGAAGTAGAACATTTTCCTTTTACAGCTGATGATCTTGATCTGAAAATCAATTTTGAAAGTTTTTACGGTCGTT
TTGCTGACGAACAATATGTAGGTTTGATTTCGTTACAAGCCGGATGTGCTCATTTTTATGCTTTTGACCAAAAAAACCGA
GGTATTGATTGGACAAATGATCGATTTGAACCGTATACGAAAAGCCGTGAATTAGCATTCATTAAAAGAGAAGTAGACCT
TCCTTTCACCGATATGCATGAAACAAATTCTAGAGGTCTTAATAAAGGCAATTTAGATGGAACTTATTTTCAATTGCAAT
CACAGTATTGA

Upstream 100 bases:

>100_bases
GCAATATCAACCTAAATTTCTGGGTGGATTTGCTCAAAAATCGTTTAGCGCGTTAATTAATTTCGGAAAAGTCTAATTTG
AAAAGACAAAAGGATCTTTT

Downstream 100 bases:

>100_bases
ATTAAAGTTAACTAGTCAATGCTGAATAACAAAATACTTTGTTTAAAGCCTACCGAGAGGTAGGTTTTGTGAATATAAAA
ACTTGCTGGAGATTGAGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MHRLTLWLVCTAILILTSCQTKVIGTGPWVKKIDSEELSKIVISFSAKMKIDKHLELEDSWVSYEDYIKKLSLHYSSQRL
LTVYDARLLLVELVEELLYRINNNSIISYEVEHFPFTADDLDLKINFESFYGRFADEQYVGLISLQAGCAHFYAFDQKNR
GIDWTNDRFEPYTKSRELAFIKREVDLPFTDMHETNSRGLNKGNLDGTYFQLQSQY

Sequences:

>Translated_216_residues
MHRLTLWLVCTAILILTSCQTKVIGTGPWVKKIDSEELSKIVISFSAKMKIDKHLELEDSWVSYEDYIKKLSLHYSSQRL
LTVYDARLLLVELVEELLYRINNNSIISYEVEHFPFTADDLDLKINFESFYGRFADEQYVGLISLQAGCAHFYAFDQKNR
GIDWTNDRFEPYTKSRELAFIKREVDLPFTDMHETNSRGLNKGNLDGTYFQLQSQY
>Mature_216_residues
MHRLTLWLVCTAILILTSCQTKVIGTGPWVKKIDSEELSKIVISFSAKMKIDKHLELEDSWVSYEDYIKKLSLHYSSQRL
LTVYDARLLLVELVEELLYRINNNSIISYEVEHFPFTADDLDLKINFESFYGRFADEQYVGLISLQAGCAHFYAFDQKNR
GIDWTNDRFEPYTKSRELAFIKREVDLPFTDMHETNSRGLNKGNLDGTYFQLQSQY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25292; Mature: 25292

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRLTLWLVCTAILILTSCQTKVIGTGPWVKKIDSEELSKIVISFSAKMKIDKHLELEDS
CCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHCCHHHHHHHHHHHHCEEEECCCCCCCCC
WVSYEDYIKKLSLHYSSQRLLTVYDARLLLVELVEELLYRINNNSIISYEVEHFPFTADD
CCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
LDLKINFESFYGRFADEQYVGLISLQAGCAHFYAFDQKNRGIDWTNDRFEPYTKSRELAF
EEEEEEHHHHHCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEE
IKREVDLPFTDMHETNSRGLNKGNLDGTYFQLQSQY
EEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MHRLTLWLVCTAILILTSCQTKVIGTGPWVKKIDSEELSKIVISFSAKMKIDKHLELEDS
CCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHCCHHHHHHHHHHHHCEEEECCCCCCCCC
WVSYEDYIKKLSLHYSSQRLLTVYDARLLLVELVEELLYRINNNSIISYEVEHFPFTADD
CCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
LDLKINFESFYGRFADEQYVGLISLQAGCAHFYAFDQKNRGIDWTNDRFEPYTKSRELAF
EEEEEEHHHHHCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEE
IKREVDLPFTDMHETNSRGLNKGNLDGTYFQLQSQY
EEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA