| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is copA [H]
Identifier: 46445712
GI number: 46445712
Start: 136133
End: 138322
Strand: Direct
Name: copA [H]
Synonym: pc0078
Alternate gene names: 46445712
Gene position: 136133-138322 (Clockwise)
Preceding gene: 46445711
Following gene: 46445713
Centisome position: 5.64
GC content: 35.53
Gene sequence:
>2190_bases ATGGAGAAAAAAAAATTGTTAATTCGAGGGATGCACTGTGTTTCATGCGCGCAAAATCTTGAAAACAGTTTGAAGAAAGT TTCTGGATTACAAGAGATTCATGTTGATTATTCGACTAGTCAAGCTGATATTATTTTTGACGAAAACAAAGTTTCATTTG CCTCACTAGAAAAGCATATAAAAAAAATGGGATATGAGAGTTATTCATTTAGGCCTTCTTTAGATGAAGATAGACGAATA AAGCAAAAAGAAATTCAAAATACTTTTAAAACCTTTTTGATCGCTGCTGTTTTGTCTTTGCCTTTTGTGATTCAGATGTT GGCGATGATGTTAGGATATGCTTTTTCCATTCCTCCAACATGGCAATTTTTTTTAGCCACCCTTGTACAATTTGGGTGTG GAGGAACATTTTATCGATCCTCTTTTTATGCTCTTAAAAACTGGCAAATTAATATGGATGTTTTGGTTGTTTTGGGATCA ACTGCGGCTTATCTATTTAGCTTTTATGTTTATCTTTTAAAACTTTCTTACTCTTTTTATTTTGAAAGTAGCGCGCTCAT TATTACATTGATTTTATTTGGACGTTGGTTAGAAGCCGTCACTAAAGGAAAAACCTCTAAAGCACTAGAGCGTTTATATC ATTTACAGCCTAAAATTGCTCGTATTGAAAAAAATGGTGAAATTATAGAGGTTGATGTTGCCTCGATTCAAGTAGGTGAT ATTTTTATGGTACGTCCTGGAGATCATATTCCAGTTGATGGATGGGTGATAGAAGGAGAGTCTTCCATCAATGAATCTTT GTTAACGGGAGAAAGTTTGCCGGTTTATAAGAAACAGGGATCGAAACTTTATGCAGCGACAATCAATGAAACTGGTTACT TGAAAGGGCAGGCCTCTTCAGTTGGATCCGATACAATTTTAGCTCAGATACTTCGAGCTGTAGAAAAAGCTCAATCTTCG AAAGCACCTATTCAAAAATTTGTGGATAAAATTTCTGCAGTTTTCGTTCCCTGCGTACTTCTAATCAGTTGTTTGACGAT ATTAATTTGGACATTTCTAATAGGTGATTTTACAAATGGATTGATTAATGCGGTCTCTGTTCTAGTGATTGCATGCCCTT GTGTTTTAGGATTAGCCACGCCGGCAGTTCTTGTGGTAGCAAGTGGGGTTGGAGCACAATACGGAATATTTTTTAAACAA GCTTCATCGATCGAGCAGTCTGAAAAAATCAAATTTTTATTTTTAGATAAGACCGGTACCTTAACGAAAGGAATTCCTTC TGTGATGGGAATCTATCCAAATGCCAAATATCTTAAAAATGACGTATTACAAATAGCAGCTTCGCTTGAAAATTGCTCTT CCCATCCTTTAGCTAAGGCTATATTAAATGAGGCCAAAGAAGAGGGAATTCTTTTAAAAATTGTCAAAGAATTTAATTCA TTTATTGGAAAAGGAGTTACAGGAACAATTGATGAAAAGGTTTATTATTTAGGCTCTGCTAACTTTGCAAAAGAAATGGG AATTGAAATCGACCCTGCTTTTTCTCTTCTTGAAGAACAAGGAGAATCACTGGTCTTTGTTTGGACAGACCATCAATTAT TAGGCATGATTACCATCATGGATGAGCTAAGAAAGGAAAGTATGGAAGTAATTCGTTTGTTGAAATTGAAAGGAATTTAT CCCATCCTTTTAACTGGAGATCGAAAATATGTTGCTGAAACTATTGCAAAAAAATTGGGGATTGAAGATGCGCGGTTTGA ATTGCTTCCAGACGATAAAATGCAGATTATCCGAGAAGCTAAAAATAGTGGAAAAGTAGGAATGATTGGAGACGGAATTA ACGATGCTCCAGCCCTTGCAGAAGCTGATGTGAGTTTTGCTCTTGCCTTTGGTAGCGATATTGCTATTGAAGTCGCTGAT ATTACTTTAATACGAAATGATTTAATGAGTTTAGTGGACGCTATAGATCTTTCCCAGCAAACCATGCGTAAAATGAAATA TAATTTATTTTTAGCATTTATTTATAATGTTCTTGCGATTCCTTTGGCAGCTTTTGGACTACTTAATCCAATGATTGCGG CAGGAACAATGGCAATGAGCTCTGTTTCTGTGATCGCCAATGCGTTATTACTACGTTATTGGAAGCCAGAAATAAATAGA AATAATGTGGAGAGGATTGTCAAAGTTTAA
Upstream 100 bases:
>100_bases GTAAGAAAGGACGTATTTCTATTGATTATTATAACCTTGATGATTTAGATCGGCTGTTAGATATATTTGGAATAAAAGAT TAATTAAGACTGAGGATAGA
Downstream 100 bases:
>100_bases AATGGGAAAACAAATTTTTATTACAGGAATAGCCGGATTCATTGGCTTTCACCTCGCGCAAAAACTTGCAAAAAGAGGAG ATCGTATCATTGGATATGAT
Product: putative copper-transporting ATPase
Products: ADP; Orthophosphate. [C]
Alternate protein names: NA
Number of amino acids: Translated: 729; Mature: 729
Protein sequence:
>729_residues MEKKKLLIRGMHCVSCAQNLENSLKKVSGLQEIHVDYSTSQADIIFDENKVSFASLEKHIKKMGYESYSFRPSLDEDRRI KQKEIQNTFKTFLIAAVLSLPFVIQMLAMMLGYAFSIPPTWQFFLATLVQFGCGGTFYRSSFYALKNWQINMDVLVVLGS TAAYLFSFYVYLLKLSYSFYFESSALIITLILFGRWLEAVTKGKTSKALERLYHLQPKIARIEKNGEIIEVDVASIQVGD IFMVRPGDHIPVDGWVIEGESSINESLLTGESLPVYKKQGSKLYAATINETGYLKGQASSVGSDTILAQILRAVEKAQSS KAPIQKFVDKISAVFVPCVLLISCLTILIWTFLIGDFTNGLINAVSVLVIACPCVLGLATPAVLVVASGVGAQYGIFFKQ ASSIEQSEKIKFLFLDKTGTLTKGIPSVMGIYPNAKYLKNDVLQIAASLENCSSHPLAKAILNEAKEEGILLKIVKEFNS FIGKGVTGTIDEKVYYLGSANFAKEMGIEIDPAFSLLEEQGESLVFVWTDHQLLGMITIMDELRKESMEVIRLLKLKGIY PILLTGDRKYVAETIAKKLGIEDARFELLPDDKMQIIREAKNSGKVGMIGDGINDAPALAEADVSFALAFGSDIAIEVAD ITLIRNDLMSLVDAIDLSQQTMRKMKYNLFLAFIYNVLAIPLAAFGLLNPMIAAGTMAMSSVSVIANALLLRYWKPEINR NNVERIVKV
Sequences:
>Translated_729_residues MEKKKLLIRGMHCVSCAQNLENSLKKVSGLQEIHVDYSTSQADIIFDENKVSFASLEKHIKKMGYESYSFRPSLDEDRRI KQKEIQNTFKTFLIAAVLSLPFVIQMLAMMLGYAFSIPPTWQFFLATLVQFGCGGTFYRSSFYALKNWQINMDVLVVLGS TAAYLFSFYVYLLKLSYSFYFESSALIITLILFGRWLEAVTKGKTSKALERLYHLQPKIARIEKNGEIIEVDVASIQVGD IFMVRPGDHIPVDGWVIEGESSINESLLTGESLPVYKKQGSKLYAATINETGYLKGQASSVGSDTILAQILRAVEKAQSS KAPIQKFVDKISAVFVPCVLLISCLTILIWTFLIGDFTNGLINAVSVLVIACPCVLGLATPAVLVVASGVGAQYGIFFKQ ASSIEQSEKIKFLFLDKTGTLTKGIPSVMGIYPNAKYLKNDVLQIAASLENCSSHPLAKAILNEAKEEGILLKIVKEFNS FIGKGVTGTIDEKVYYLGSANFAKEMGIEIDPAFSLLEEQGESLVFVWTDHQLLGMITIMDELRKESMEVIRLLKLKGIY PILLTGDRKYVAETIAKKLGIEDARFELLPDDKMQIIREAKNSGKVGMIGDGINDAPALAEADVSFALAFGSDIAIEVAD ITLIRNDLMSLVDAIDLSQQTMRKMKYNLFLAFIYNVLAIPLAAFGLLNPMIAAGTMAMSSVSVIANALLLRYWKPEINR NNVERIVKV >Mature_729_residues MEKKKLLIRGMHCVSCAQNLENSLKKVSGLQEIHVDYSTSQADIIFDENKVSFASLEKHIKKMGYESYSFRPSLDEDRRI KQKEIQNTFKTFLIAAVLSLPFVIQMLAMMLGYAFSIPPTWQFFLATLVQFGCGGTFYRSSFYALKNWQINMDVLVVLGS TAAYLFSFYVYLLKLSYSFYFESSALIITLILFGRWLEAVTKGKTSKALERLYHLQPKIARIEKNGEIIEVDVASIQVGD IFMVRPGDHIPVDGWVIEGESSINESLLTGESLPVYKKQGSKLYAATINETGYLKGQASSVGSDTILAQILRAVEKAQSS KAPIQKFVDKISAVFVPCVLLISCLTILIWTFLIGDFTNGLINAVSVLVIACPCVLGLATPAVLVVASGVGAQYGIFFKQ ASSIEQSEKIKFLFLDKTGTLTKGIPSVMGIYPNAKYLKNDVLQIAASLENCSSHPLAKAILNEAKEEGILLKIVKEFNS FIGKGVTGTIDEKVYYLGSANFAKEMGIEIDPAFSLLEEQGESLVFVWTDHQLLGMITIMDELRKESMEVIRLLKLKGIY PILLTGDRKYVAETIAKKLGIEDARFELLPDDKMQIIREAKNSGKVGMIGDGINDAPALAEADVSFALAFGSDIAIEVAD ITLIRNDLMSLVDAIDLSQQTMRKMKYNLFLAFIYNVLAIPLAAFGLLNPMIAAGTMAMSSVSVIANALLLRYWKPEINR NNVERIVKV
Specific function: Involved in copper export [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 HMA domains [H]
Homologues:
Organism=Homo sapiens, GI55743071, Length=782, Percent_Identity=34.0153452685422, Blast_Score=420, Evalue=1e-117, Organism=Homo sapiens, GI115529486, Length=815, Percent_Identity=32.8834355828221, Blast_Score=405, Evalue=1e-113, Organism=Homo sapiens, GI55743073, Length=552, Percent_Identity=35.8695652173913, Blast_Score=301, Evalue=2e-81, Organism=Escherichia coli, GI1786691, Length=742, Percent_Identity=37.0619946091644, Blast_Score=431, Evalue=1e-122, Organism=Escherichia coli, GI1789879, Length=711, Percent_Identity=27.4261603375527, Blast_Score=283, Evalue=2e-77, Organism=Escherichia coli, GI1786914, Length=505, Percent_Identity=27.3267326732673, Blast_Score=143, Evalue=4e-35, Organism=Escherichia coli, GI2367363, Length=578, Percent_Identity=23.356401384083, Blast_Score=92, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17556548, Length=793, Percent_Identity=32.6607818411097, Blast_Score=353, Evalue=2e-97, Organism=Caenorhabditis elegans, GI71997275, Length=208, Percent_Identity=30.7692307692308, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71997262, Length=208, Percent_Identity=30.7692307692308, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71997269, Length=167, Percent_Identity=31.1377245508982, Blast_Score=70, Evalue=4e-12, Organism=Caenorhabditis elegans, GI193210130, Length=169, Percent_Identity=26.0355029585799, Blast_Score=69, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17554158, Length=169, Percent_Identity=26.0355029585799, Blast_Score=68, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71988506, Length=169, Percent_Identity=26.0355029585799, Blast_Score=68, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6320475, Length=772, Percent_Identity=31.4766839378238, Blast_Score=349, Evalue=1e-96, Organism=Saccharomyces cerevisiae, GI6319772, Length=682, Percent_Identity=31.524926686217, Blast_Score=311, Evalue=2e-85, Organism=Saccharomyces cerevisiae, GI6321430, Length=520, Percent_Identity=25, Blast_Score=125, Evalue=4e-29, Organism=Saccharomyces cerevisiae, GI6325221, Length=524, Percent_Identity=25, Blast_Score=117, Evalue=7e-27, Organism=Saccharomyces cerevisiae, GI6321271, Length=199, Percent_Identity=28.1407035175879, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI221329854, Length=516, Percent_Identity=35.4651162790698, Blast_Score=267, Evalue=2e-71, Organism=Drosophila melanogaster, GI45553437, Length=292, Percent_Identity=22.6027397260274, Blast_Score=72, Evalue=2e-12, Organism=Drosophila melanogaster, GI24648576, Length=292, Percent_Identity=22.6027397260274, Blast_Score=72, Evalue=2e-12, Organism=Drosophila melanogaster, GI45553435, Length=292, Percent_Identity=22.6027397260274, Blast_Score=72, Evalue=2e-12, Organism=Drosophila melanogaster, GI45553439, Length=292, Percent_Identity=22.6027397260274, Blast_Score=72, Evalue=2e-12, Organism=Drosophila melanogaster, GI45553441, Length=292, Percent_Identity=22.6027397260274, Blast_Score=72, Evalue=2e-12, Organism=Drosophila melanogaster, GI24648580, Length=292, Percent_Identity=22.6027397260274, Blast_Score=72, Evalue=2e-12, Organism=Drosophila melanogaster, GI24648578, Length=292, Percent_Identity=22.6027397260274, Blast_Score=72, Evalue=2e-12, Organism=Drosophila melanogaster, GI281362164, Length=292, Percent_Identity=22.6027397260274, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24648582, Length=292, Percent_Identity=22.6027397260274, Blast_Score=70, Evalue=6e-12, Organism=Drosophila melanogaster, GI24668708, Length=151, Percent_Identity=29.1390728476821, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI24668704, Length=151, Percent_Identity=29.1390728476821, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI281366617, Length=151, Percent_Identity=29.1390728476821, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI161085803, Length=151, Percent_Identity=29.1390728476821, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI24668696, Length=151, Percent_Identity=29.1390728476821, Blast_Score=67, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR006403 - InterPro: IPR000695 - InterPro: IPR006416 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR017969 - InterPro: IPR006121 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00403 HMA; PF00702 Hydrolase [H]
EC number: 3.6.3.4 [C]
Molecular weight: Translated: 80681; Mature: 80681
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: PS00154 ATPASE_E1_E2 ; PS01047 HMA_1 ; PS50846 HMA_2 ; PS01229 COF_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKKKLLIRGMHCVSCAQNLENSLKKVSGLQEIHVDYSTSQADIIFDENKVSFASLEKHI CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCEEEEECCCCHHHHHHHHH KKMGYESYSFRPSLDEDRRIKQKEIQNTFKTFLIAAVLSLPFVIQMLAMMLGYAFSIPPT HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH WQFFLATLVQFGCGGTFYRSSFYALKNWQINMDVLVVLGSTAAYLFSFYVYLLKLSYSFY HHHHHHHHHHHCCCCHHHHHHEEEEECCEECEEEEEEECCHHHHHHHHHHHHHHHHHHHE FESSALIITLILFGRWLEAVTKGKTSKALERLYHLQPKIARIEKNGEIIEVDVASIQVGD ECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCCCCCEEEEEEEEEEECC IFMVRPGDHIPVDGWVIEGESSINESLLTGESLPVYKKQGSKLYAATINETGYLKGQASS EEEECCCCCCCCCCEEECCCCCCCHHHHCCCCCCCHHCCCCEEEEEEECCCCCCCCCCCC VGSDTILAQILRAVEKAQSSKAPIQKFVDKISAVFVPCVLLISCLTILIWTFLIGDFTNG CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LINAVSVLVIACPCVLGLATPAVLVVASGVGAQYGIFFKQASSIEQSEKIKFLFLDKTGT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCC LTKGIPSVMGIYPNAKYLKNDVLQIAASLENCSSHPLAKAILNEAKEEGILLKIVKEFNS CCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH FIGKGVTGTIDEKVYYLGSANFAKEMGIEIDPAFSLLEEQGESLVFVWTDHQLLGMITIM HHCCCCCCCCCCEEEEECCCCHHHHCCCCCCHHHHHHHHCCCEEEEEEECCHHHHHHHHH DELRKESMEVIRLLKLKGIYPILLTGDRKYVAETIAKKLGIEDARFELLPDDKMQIIREA HHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHH KNSGKVGMIGDGINDAPALAEADVSFALAFGSDIAIEVADITLIRNDLMSLVDAIDLSQQ HCCCCEEEECCCCCCCCCHHHCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHCCCHH TMRKMKYNLFLAFIYNVLAIPLAAFGLLNPMIAAGTMAMSSVSVIANALLLRYWKPEINR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC NNVERIVKV CCHHHHHCC >Mature Secondary Structure MEKKKLLIRGMHCVSCAQNLENSLKKVSGLQEIHVDYSTSQADIIFDENKVSFASLEKHI CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCEEEEECCCCHHHHHHHHH KKMGYESYSFRPSLDEDRRIKQKEIQNTFKTFLIAAVLSLPFVIQMLAMMLGYAFSIPPT HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH WQFFLATLVQFGCGGTFYRSSFYALKNWQINMDVLVVLGSTAAYLFSFYVYLLKLSYSFY HHHHHHHHHHHCCCCHHHHHHEEEEECCEECEEEEEEECCHHHHHHHHHHHHHHHHHHHE FESSALIITLILFGRWLEAVTKGKTSKALERLYHLQPKIARIEKNGEIIEVDVASIQVGD ECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCCCCCEEEEEEEEEEECC IFMVRPGDHIPVDGWVIEGESSINESLLTGESLPVYKKQGSKLYAATINETGYLKGQASS EEEECCCCCCCCCCEEECCCCCCCHHHHCCCCCCCHHCCCCEEEEEEECCCCCCCCCCCC VGSDTILAQILRAVEKAQSSKAPIQKFVDKISAVFVPCVLLISCLTILIWTFLIGDFTNG CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LINAVSVLVIACPCVLGLATPAVLVVASGVGAQYGIFFKQASSIEQSEKIKFLFLDKTGT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCC LTKGIPSVMGIYPNAKYLKNDVLQIAASLENCSSHPLAKAILNEAKEEGILLKIVKEFNS CCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH FIGKGVTGTIDEKVYYLGSANFAKEMGIEIDPAFSLLEEQGESLVFVWTDHQLLGMITIM HHCCCCCCCCCCEEEEECCCCHHHHCCCCCCHHHHHHHHCCCEEEEEEECCHHHHHHHHH DELRKESMEVIRLLKLKGIYPILLTGDRKYVAETIAKKLGIEDARFELLPDDKMQIIREA HHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHH KNSGKVGMIGDGINDAPALAEADVSFALAFGSDIAIEVADITLIRNDLMSLVDAIDLSQQ HCCCCEEEECCCCCCCCCHHHCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHCCCHH TMRKMKYNLFLAFIYNVLAIPLAAFGLLNPMIAAGTMAMSSVSVIANALLLRYWKPEINR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC NNVERIVKV CCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Cu [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O [C]
Specific reaction: ATP + H2O = ADP + Orthophosphate. [C]
General reaction: Phosphorous acid anhydride hydrolysis [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA