Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46445698

Identifier: 46445698

GI number: 46445698

Start: 121198

End: 122781

Strand: Reverse

Name: 46445698

Synonym: pc0064

Alternate gene names: NA

Gene position: 122781-121198 (Counterclockwise)

Preceding gene: 46445699

Following gene: 46445697

Centisome position: 5.09

GC content: 34.72

Gene sequence:

>1584_bases
ATGAATTTTACTTCTGCCGTTTTTCAAGATAGGCTACCAGTACAGTGGAGTACTCTATCTTCAAATATGAAAATTCTTGT
TAAAGAGTTGGCAGAAACTGCAAAAGAAACTGTTAGCTTACCTTCGCTAAAAACTAAAAAAGCTTTTTTTAAAGCGATTC
AAGAAAAGCAGCGCAATTTAAGAAATTCTTATCATAACAGCTTTTGGGGCCATGCTATTAAGCATTTGGAATGTTTTGAA
GATTGGGAGTTTACATACCTAAATAACCCCTCCATTTATGTAGAATTCTTAAATAGTCAAAGAATTACCCATCAGGCCGC
ACGCACACAATTAAAAATATACGAAACTGCTCATAATATTGCTCAAATAATCCTGCAACATAGCAGTAGCTTTCAATGGA
AAAAAACCTGCGCTTTACAACTGATGGTATGCGACATGTGGAATACGTTTGTTGCTTCATCTAGTTTCTGTACGGCTAGC
CATTGTTTACCACCCATTGCTAAGTGGGCAGAAGATGAGATAGGTCATTGGGCACTTTTCAAGCATTCTATTAAAAAAGA
GCGTGCTATTTCTATAAACGGACTAGAAGACTCTATTCCTATTGTTTCTTTTCCTTTATCTTATTCTTCTAAAGGAATAT
TAAGTTGGCTTGTATTAGCCCGTGAAACTGCTCACACTATTTTGGAAACAAATCCAAAAGCTAAAAAAATTTTATCAAAT
GCCATTAAGAAAGACATTTATCAAGCTTTGGAATATTACCCAGAGGATATAAAGAAAAATTGGGCTAACTACTGGGGTAA
CAGGTTTAGCGAGATCGGTGCTGATGTGATGGCTATTCTATATATGGGTCCGGCTGCTGCAATTGGCTTAATTGCATTTT
TGAGATGTCATCGACCCGATCAGACTTTATCTAATAACATAGATTTAAATGATTCTCATCTGGCCGGTACTTTAAGAGGA
TTGCTGGTTGCTCATGCAGTCTCTTACCTAAATATCTCAGTGTTCGCAAAAACATGTTGGGTAGATTATTTACTTCATGA
GGTAAAAAAGAATTTTGACAAAACAAATTGGGAGTTTGCGAATATTTGTGCTAGACAAGCAGCTAAAACAATCATGCATA
CTCCCATCATTGGCAATCTATCACTAAAAGATATCAAATGTTGGAGTAACGAAGATGAAAATCTTGTTGCTTACTATTTA
GACGGCACAAGCTTAAGCAAAGAGTTTATTCATTATAAGGCTCCTCATATTATTGCTAGTGCTAATTTACATCTTCTTTT
AAAAGTGCAGTTACATGTTTCAAATGATGGCCGAATTGGTCATATATTTAATCAAATGATTGACCATCTATACAAAAAAG
GGCAAGCGCAAACAAAAAATCGAAATTGTTTAAGTTGTTCTATTACTCAAAGAGATATTTTTCCTTATTGTCCAGCACCG
GCACAAGAAACAAGTCATTCCAATCCTATAGCGAAAGTTAAAAAAATCCAGGCTAAAAATGCAATAGATCCATTGATAGT
TGTAGCAATAGTAGTCATATTTTTTGGAGTAATAATACTCACAGAAAATAGTAAAAAAGAGTAA

Upstream 100 bases:

>100_bases
AAGTTAAAATTTTTAAATTAAAAAATAATTTTTATTTTGCTGAAAATTACAAGATTTTCCTCATATATTTTTTTCAAATA
AAATCAGTATCAAGGGCTAT

Downstream 100 bases:

>100_bases
TAGCATAGCTGAGCAATAAATGGCTTGAGGCTCATCATGCAAAAATCAAGTTAGATTCAACCTTGCATGTAGTTAAAAAA
GGTTACAGGCCGTCTCTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MNFTSAVFQDRLPVQWSTLSSNMKILVKELAETAKETVSLPSLKTKKAFFKAIQEKQRNLRNSYHNSFWGHAIKHLECFE
DWEFTYLNNPSIYVEFLNSQRITHQAARTQLKIYETAHNIAQIILQHSSSFQWKKTCALQLMVCDMWNTFVASSSFCTAS
HCLPPIAKWAEDEIGHWALFKHSIKKERAISINGLEDSIPIVSFPLSYSSKGILSWLVLARETAHTILETNPKAKKILSN
AIKKDIYQALEYYPEDIKKNWANYWGNRFSEIGADVMAILYMGPAAAIGLIAFLRCHRPDQTLSNNIDLNDSHLAGTLRG
LLVAHAVSYLNISVFAKTCWVDYLLHEVKKNFDKTNWEFANICARQAAKTIMHTPIIGNLSLKDIKCWSNEDENLVAYYL
DGTSLSKEFIHYKAPHIIASANLHLLLKVQLHVSNDGRIGHIFNQMIDHLYKKGQAQTKNRNCLSCSITQRDIFPYCPAP
AQETSHSNPIAKVKKIQAKNAIDPLIVVAIVVIFFGVIILTENSKKE

Sequences:

>Translated_527_residues
MNFTSAVFQDRLPVQWSTLSSNMKILVKELAETAKETVSLPSLKTKKAFFKAIQEKQRNLRNSYHNSFWGHAIKHLECFE
DWEFTYLNNPSIYVEFLNSQRITHQAARTQLKIYETAHNIAQIILQHSSSFQWKKTCALQLMVCDMWNTFVASSSFCTAS
HCLPPIAKWAEDEIGHWALFKHSIKKERAISINGLEDSIPIVSFPLSYSSKGILSWLVLARETAHTILETNPKAKKILSN
AIKKDIYQALEYYPEDIKKNWANYWGNRFSEIGADVMAILYMGPAAAIGLIAFLRCHRPDQTLSNNIDLNDSHLAGTLRG
LLVAHAVSYLNISVFAKTCWVDYLLHEVKKNFDKTNWEFANICARQAAKTIMHTPIIGNLSLKDIKCWSNEDENLVAYYL
DGTSLSKEFIHYKAPHIIASANLHLLLKVQLHVSNDGRIGHIFNQMIDHLYKKGQAQTKNRNCLSCSITQRDIFPYCPAP
AQETSHSNPIAKVKKIQAKNAIDPLIVVAIVVIFFGVIILTENSKKE
>Mature_527_residues
MNFTSAVFQDRLPVQWSTLSSNMKILVKELAETAKETVSLPSLKTKKAFFKAIQEKQRNLRNSYHNSFWGHAIKHLECFE
DWEFTYLNNPSIYVEFLNSQRITHQAARTQLKIYETAHNIAQIILQHSSSFQWKKTCALQLMVCDMWNTFVASSSFCTAS
HCLPPIAKWAEDEIGHWALFKHSIKKERAISINGLEDSIPIVSFPLSYSSKGILSWLVLARETAHTILETNPKAKKILSN
AIKKDIYQALEYYPEDIKKNWANYWGNRFSEIGADVMAILYMGPAAAIGLIAFLRCHRPDQTLSNNIDLNDSHLAGTLRG
LLVAHAVSYLNISVFAKTCWVDYLLHEVKKNFDKTNWEFANICARQAAKTIMHTPIIGNLSLKDIKCWSNEDENLVAYYL
DGTSLSKEFIHYKAPHIIASANLHLLLKVQLHVSNDGRIGHIFNQMIDHLYKKGQAQTKNRNCLSCSITQRDIFPYCPAP
AQETSHSNPIAKVKKIQAKNAIDPLIVVAIVVIFFGVIILTENSKKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59927; Mature: 59927

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFTSAVFQDRLPVQWSTLSSNMKILVKELAETAKETVSLPSLKTKKAFFKAIQEKQRNL
CCCHHHHHHCCCCCEEHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RNSYHNSFWGHAIKHLECFEDWEFTYLNNPSIYVEFLNSQRITHQAARTQLKIYETAHNI
HHHHCCHHHHHHHHHHHHHCCCCEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHH
AQIILQHSSSFQWKKTCALQLMVCDMWNTFVASSSFCTASHCLPPIAKWAEDEIGHWALF
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHCCCHHHHH
KHSIKKERAISINGLEDSIPIVSFPLSYSSKGILSWLVLARETAHTILETNPKAKKILSN
HHHHHHCCEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
AIKKDIYQALEYYPEDIKKNWANYWGNRFSEIGADVMAILYMGPAAAIGLIAFLRCHRPD
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCC
QTLSNNIDLNDSHLAGTLRGLLVAHAVSYLNISVFAKTCWVDYLLHEVKKNFDKTNWEFA
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
NICARQAAKTIMHTPIIGNLSLKDIKCWSNEDENLVAYYLDGTSLSKEFIHYKAPHIIAS
HHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEEEEEECCCHHHHHHHHHCCCCEEEE
ANLHLLLKVQLHVSNDGRIGHIFNQMIDHLYKKGQAQTKNRNCLSCSITQRDIFPYCPAP
CCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCC
AQETSHSNPIAKVKKIQAKNAIDPLIVVAIVVIFFGVIILTENSKKE
CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEECCCCCC
>Mature Secondary Structure
MNFTSAVFQDRLPVQWSTLSSNMKILVKELAETAKETVSLPSLKTKKAFFKAIQEKQRNL
CCCHHHHHHCCCCCEEHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RNSYHNSFWGHAIKHLECFEDWEFTYLNNPSIYVEFLNSQRITHQAARTQLKIYETAHNI
HHHHCCHHHHHHHHHHHHHCCCCEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHH
AQIILQHSSSFQWKKTCALQLMVCDMWNTFVASSSFCTASHCLPPIAKWAEDEIGHWALF
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHCCCHHHHH
KHSIKKERAISINGLEDSIPIVSFPLSYSSKGILSWLVLARETAHTILETNPKAKKILSN
HHHHHHCCEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
AIKKDIYQALEYYPEDIKKNWANYWGNRFSEIGADVMAILYMGPAAAIGLIAFLRCHRPD
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCC
QTLSNNIDLNDSHLAGTLRGLLVAHAVSYLNISVFAKTCWVDYLLHEVKKNFDKTNWEFA
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
NICARQAAKTIMHTPIIGNLSLKDIKCWSNEDENLVAYYLDGTSLSKEFIHYKAPHIIAS
HHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEEEEEECCCHHHHHHHHHCCCCEEEE
ANLHLLLKVQLHVSNDGRIGHIFNQMIDHLYKKGQAQTKNRNCLSCSITQRDIFPYCPAP
CCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCC
AQETSHSNPIAKVKKIQAKNAIDPLIVVAIVVIFFGVIILTENSKKE
CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA