| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46445697
Identifier: 46445697
GI number: 46445697
Start: 119309
End: 120196
Strand: Reverse
Name: 46445697
Synonym: pc0063
Alternate gene names: NA
Gene position: 120196-119309 (Counterclockwise)
Preceding gene: 46445698
Following gene: 46445696
Centisome position: 4.98
GC content: 34.35
Gene sequence:
>888_bases ATGTTTGTTTTGCCATTTTTATCTAGTCCATGCGGCTATAGTCTACAAGCTTATAAAAGTACCTGTATTGAAATACCTAT AATAGTAATAGACGGCCTTTTTAATCAGAAACGAGTTTATAGAGGGTCGCAAGAATATAATCAGCAAATTAAATCTTTCC CTGGATATAATATTAAAACTGAATTACAGCCATTTTTTGATCGAATAGGGATTAGACAGGATATTATCGTTATAGAAAGA CTTAATCTAGGGTTCTGCGGAGCTCAAGGTACGAATTTTTTTACTAAAGGCGATGCTGTCATCTGGGTAGCTCCTAAATT TCACAAGGTAGATAAAGGTGCCTGCCATTGGGTAATGAAACATGAGGCCTGCCACATTAAAAATAACGATTGTTTCACTA TGCCCTTGATACCTGCTATTTGCTCAATAGCTGCAGCCACATTTTCTGCTTTCATGATGCCTATCATTCCTGCATTATTA ATAACTATGAGTGTAGGGTTTATTGCTCAAGCCATATTTTCTCAATATCGTGAAGGAAAAGCAGATGATTTAGCGATAAC TGAAAGTTCTGTTGAAGAGTTGAAAGGCGGAAGAAGATTATTAATGAGTTTACAACAAACTAACTTGGAAAGCCGCACAA CTATATGGAAAAAACTCGTCATCTCCTCTAGTGGTGAAAACAGATTTGATTTTTTGCATCCTTCAACTGCAAGTAGATTA AAAAAGATAGAACGTGCTTTACAACAGAAAGATGTGCAAATCGACGAAGGAGAAGAAGTAGAAAAAATTGTTAAATTAAA AAATCTAATGGTTGAAATTAATTTAAAAATAGAAAAGGAATTGAAAGAGTTAGGAACATTTGGATTAATGAAGGCAATGC AACAATAA
Upstream 100 bases:
>100_bases ATAATATATATTAAAAAAAATTAAACAAACTTAATATTGATTTAAAATATATCATCTAATATAATTTATTGTATAGTTAC ATTAACAATAAGGAAATTAT
Downstream 100 bases:
>100_bases AATTCATTATGTTTTCTCAACTAACGTCTTGTTCATCTTAAACTTTTCTCCCTTCCTCAGCAGGTAAGCTTTTACTTACG AGCTTATCTGTCCTATAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MFVLPFLSSPCGYSLQAYKSTCIEIPIIVIDGLFNQKRVYRGSQEYNQQIKSFPGYNIKTELQPFFDRIGIRQDIIVIER LNLGFCGAQGTNFFTKGDAVIWVAPKFHKVDKGACHWVMKHEACHIKNNDCFTMPLIPAICSIAAATFSAFMMPIIPALL ITMSVGFIAQAIFSQYREGKADDLAITESSVEELKGGRRLLMSLQQTNLESRTTIWKKLVISSSGENRFDFLHPSTASRL KKIERALQQKDVQIDEGEEVEKIVKLKNLMVEINLKIEKELKELGTFGLMKAMQQ
Sequences:
>Translated_295_residues MFVLPFLSSPCGYSLQAYKSTCIEIPIIVIDGLFNQKRVYRGSQEYNQQIKSFPGYNIKTELQPFFDRIGIRQDIIVIER LNLGFCGAQGTNFFTKGDAVIWVAPKFHKVDKGACHWVMKHEACHIKNNDCFTMPLIPAICSIAAATFSAFMMPIIPALL ITMSVGFIAQAIFSQYREGKADDLAITESSVEELKGGRRLLMSLQQTNLESRTTIWKKLVISSSGENRFDFLHPSTASRL KKIERALQQKDVQIDEGEEVEKIVKLKNLMVEINLKIEKELKELGTFGLMKAMQQ >Mature_295_residues MFVLPFLSSPCGYSLQAYKSTCIEIPIIVIDGLFNQKRVYRGSQEYNQQIKSFPGYNIKTELQPFFDRIGIRQDIIVIER LNLGFCGAQGTNFFTKGDAVIWVAPKFHKVDKGACHWVMKHEACHIKNNDCFTMPLIPAICSIAAATFSAFMMPIIPALL ITMSVGFIAQAIFSQYREGKADDLAITESSVEELKGGRRLLMSLQQTNLESRTTIWKKLVISSSGENRFDFLHPSTASRL KKIERALQQKDVQIDEGEEVEKIVKLKNLMVEINLKIEKELKELGTFGLMKAMQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33396; Mature: 33396
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVLPFLSSPCGYSLQAYKSTCIEIPIIVIDGLFNQKRVYRGSQEYNQQIKSFPGYNIKT CEECCCCCCCCCCCHHHHHHHHHEEEEEEEECCCCHHHHHCCCHHHHHHHHHCCCCCCCC ELQPFFDRIGIRQDIIVIERLNLGFCGAQGTNFFTKGDAVIWVAPKFHKVDKGACHWVMK HHHHHHHHCCCCCCEEEEEECCCCEECCCCCCEEECCCEEEEECCCCCCCCCCHHHHHHH HEACHIKNNDCFTMPLIPAICSIAAATFSAFMMPIIPALLITMSVGFIAQAIFSQYREGK CCEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ADDLAITESSVEELKGGRRLLMSLQQTNLESRTTIWKKLVISSSGENRFDFLHPSTASRL CCCEEECHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEECCCCHHHHH KKIERALQQKDVQIDEGEEVEKIVKLKNLMVEINLKIEKELKELGTFGLMKAMQQ HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFVLPFLSSPCGYSLQAYKSTCIEIPIIVIDGLFNQKRVYRGSQEYNQQIKSFPGYNIKT CEECCCCCCCCCCCHHHHHHHHHEEEEEEEECCCCHHHHHCCCHHHHHHHHHCCCCCCCC ELQPFFDRIGIRQDIIVIERLNLGFCGAQGTNFFTKGDAVIWVAPKFHKVDKGACHWVMK HHHHHHHHCCCCCCEEEEEECCCCEECCCCCCEEECCCEEEEECCCCCCCCCCHHHHHHH HEACHIKNNDCFTMPLIPAICSIAAATFSAFMMPIIPALLITMSVGFIAQAIFSQYREGK CCEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ADDLAITESSVEELKGGRRLLMSLQQTNLESRTTIWKKLVISSSGENRFDFLHPSTASRL CCCEEECHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEECCCCHHHHH KKIERALQQKDVQIDEGEEVEKIVKLKNLMVEINLKIEKELKELGTFGLMKAMQQ HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA