Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is ssuC [C]

Identifier: 46445649

GI number: 46445649

Start: 25781

End: 26557

Strand: Direct

Name: ssuC [C]

Synonym: pc0015

Alternate gene names: 46445649

Gene position: 25781-26557 (Clockwise)

Preceding gene: 46445648

Following gene: 46445652

Centisome position: 1.07

GC content: 38.1

Gene sequence:

>777_bases
ATGAATTTACAAAGAATCTTTCATGCTAGTTTATTTTTTTTAACTTTAACTGTCCTATGGCAATTACTCGTTTACGCTGA
AATTTGGTCACCTGTTTTAGTTCCTTCGCCTCTTCAAGTACTGCACTATTTAATTAGTTCCTTACAAGATGGCACATTAA
TTTCAGCGAGCTATGTTACTTTAAAAAGACTTATTCAAGGATACCTTGTCGGATTATTAGTGGGAATTCCTATAGGGCTG
TTAAATGCTCGTTTTCAACTATTTGAAGATACAATTGGTTTTTTAGCACTTGGCTTGCAAACGCTTCCCAGCGTTTGTTG
GGCACCTTTAGCCATATTGTGGTTTGGCCAAACAGAAAAAGCGATGTTTTTTATTGTTATTATGGGATCTATATGGTCTA
TCGCTTTAGCAACTGATGCAGGGGTTAAAAATGTTCCTCCTCTTTATGTCAGAGCGGCACGCACATTAGGATCTCAAGGC
TTTCACACTTGGTTTAAAGTAATTGTGCCCGCAGCGTTGCCATTTATTATTAGCGGAATGAAGCAGGGATGGGCTTTTGC
TTGGCGATCCTTAATGGCTGCAGAAATTTATATTACCATTTTAACAGGTTTTGGATTGGGTAATTTATTGCACTATGGCC
GAGAGCTTCACGCTATGGATGCAGTCATTGGAGTGATGTTTGTAATTATTGCTGTTGGCTTACTTGTTGATAAAGTGGTA
TTTTCCCCTTTAGAAGTTTTCATGCATGAAAAATGGGGAACGCATACTAAGCGTTAA

Upstream 100 bases:

>100_bases
GATTACCACGTTCTAGAGATATTCGAAGTATAGAAGTAGCCCAATTTGCTAGTGAAATTACGCATATATTAAAAAATCAA
ATGCCTTTAATAGAAAGAAT

Downstream 100 bases:

>100_bases
AATAACATAAAATTTAATATTTTAATGTTAGAGCACAGAAAAGAAGAAAATTTCTATTTTTCTATCTATGCAGTACTTTC
GAGCTTCCAATTCAAGTCTG

Product: putative integral membrane components of the ABC transporters

Products: taurine [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MNLQRIFHASLFFLTLTVLWQLLVYAEIWSPVLVPSPLQVLHYLISSLQDGTLISASYVTLKRLIQGYLVGLLVGIPIGL
LNARFQLFEDTIGFLALGLQTLPSVCWAPLAILWFGQTEKAMFFIVIMGSIWSIALATDAGVKNVPPLYVRAARTLGSQG
FHTWFKVIVPAALPFIISGMKQGWAFAWRSLMAAEIYITILTGFGLGNLLHYGRELHAMDAVIGVMFVIIAVGLLVDKVV
FSPLEVFMHEKWGTHTKR

Sequences:

>Translated_258_residues
MNLQRIFHASLFFLTLTVLWQLLVYAEIWSPVLVPSPLQVLHYLISSLQDGTLISASYVTLKRLIQGYLVGLLVGIPIGL
LNARFQLFEDTIGFLALGLQTLPSVCWAPLAILWFGQTEKAMFFIVIMGSIWSIALATDAGVKNVPPLYVRAARTLGSQG
FHTWFKVIVPAALPFIISGMKQGWAFAWRSLMAAEIYITILTGFGLGNLLHYGRELHAMDAVIGVMFVIIAVGLLVDKVV
FSPLEVFMHEKWGTHTKR
>Mature_258_residues
MNLQRIFHASLFFLTLTVLWQLLVYAEIWSPVLVPSPLQVLHYLISSLQDGTLISASYVTLKRLIQGYLVGLLVGIPIGL
LNARFQLFEDTIGFLALGLQTLPSVCWAPLAILWFGQTEKAMFFIVIMGSIWSIALATDAGVKNVPPLYVRAARTLGSQG
FHTWFKVIVPAALPFIISGMKQGWAFAWRSLMAAEIYITILTGFGLGNLLHYGRELHAMDAVIGVMFVIIAVGLLVDKVV
FSPLEVFMHEKWGTHTKR

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1786564, Length=213, Percent_Identity=28.169014084507, Blast_Score=87, Evalue=8e-19,
Organism=Escherichia coli, GI87081802, Length=139, Percent_Identity=33.8129496402878, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28704; Mature: 28704

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: taurine [Periplasm]; ATP; H2O [C]

Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]