| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
Click here to switch to the map view.
The map label for this gene is 45659299
Identifier: 45659299
GI number: 45659299
Start: 4259419
End: 4259916
Strand: Direct
Name: 45659299
Synonym: LIC13484
Alternate gene names: NA
Gene position: 4259419-4259916 (Clockwise)
Preceding gene: 45659298
Following gene: 45659305
Centisome position: 99.58
GC content: 33.33
Gene sequence:
>498_bases TTGAAAGTACTCACTTATCAACCCCCTCGAAAAGAAACAGAAACCAAAAGCGCTTCCAAAAATAAGAAAGTAGGAACTTC TTCCTTAAATTCTCTTAGCCAACCTGAAGCAATTGAAAACGTTTCCTCTTCTTTTTTAGATATTTTAGAAGAAATTGTTC CTTCAAAATCGGAAACCACAAAAGATCTGAATTCTCTTTGGAGAGAACTTCCAGACATAGAAAAAAGATTTTTAGATTTT GCTTCGATCGAAAATTTAGAAATCTACCAAAAACACATCCAAGCAATTACAAAGGCTGTTATCGATCAGAATATGAGAGT AGAAACACTTTCTAGAAAAATGAAAGGGGAAGCTAAAAAAATCTATCACGTTGTTAAAATCATTGATGAAAAAATTCAGA TCTTAGCGGAACTGATTATGAATGAAGGAAACTCCGCATTTAAACTTTTAAAGTCCCTGACGGATATCAGAGGGCTTCTT CTAGATATTCAAGAATAG
Upstream 100 bases:
>100_bases TTGCTTCCTGCAGAATGAAAGGAGACATTGTATCTCCTAGAATCGTAATGGAAGAAGGAGTACAATTCGAAGGCAATTGT AAGATCAACCCAGTTGCACA
Downstream 100 bases:
>100_bases AGTTTTGTTTAGACTTTATTTCAAAATCTCAATAAAATTCAATAGTGAAGATTAACAAAACTACTTCAATCGAACAGAAA CAAACAGAGAATTTATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MKVLTYQPPRKETETKSASKNKKVGTSSLNSLSQPEAIENVSSSFLDILEEIVPSKSETTKDLNSLWRELPDIEKRFLDF ASIENLEIYQKHIQAITKAVIDQNMRVETLSRKMKGEAKKIYHVVKIIDEKIQILAELIMNEGNSAFKLLKSLTDIRGLL LDIQE
Sequences:
>Translated_165_residues MKVLTYQPPRKETETKSASKNKKVGTSSLNSLSQPEAIENVSSSFLDILEEIVPSKSETTKDLNSLWRELPDIEKRFLDF ASIENLEIYQKHIQAITKAVIDQNMRVETLSRKMKGEAKKIYHVVKIIDEKIQILAELIMNEGNSAFKLLKSLTDIRGLL LDIQE >Mature_165_residues MKVLTYQPPRKETETKSASKNKKVGTSSLNSLSQPEAIENVSSSFLDILEEIVPSKSETTKDLNSLWRELPDIEKRFLDF ASIENLEIYQKHIQAITKAVIDQNMRVETLSRKMKGEAKKIYHVVKIIDEKIQILAELIMNEGNSAFKLLKSLTDIRGLL LDIQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18832; Mature: 18832
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLTYQPPRKETETKSASKNKKVGTSSLNSLSQPEAIENVSSSFLDILEEIVPSKSETT CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHH KDLNSLWRELPDIEKRFLDFASIENLEIYQKHIQAITKAVIDQNMRVETLSRKMKGEAKK HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH IYHVVKIIDEKIQILAELIMNEGNSAFKLLKSLTDIRGLLLDIQE HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKVLTYQPPRKETETKSASKNKKVGTSSLNSLSQPEAIENVSSSFLDILEEIVPSKSETT CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHH KDLNSLWRELPDIEKRFLDFASIENLEIYQKHIQAITKAVIDQNMRVETLSRKMKGEAKK HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH IYHVVKIIDEKIQILAELIMNEGNSAFKLLKSLTDIRGLLLDIQE HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA