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The map label for this gene is yebA [C]

Identifier: 45659297

GI number: 45659297

Start: 4258056

End: 4259075

Strand: Direct

Name: yebA [C]

Synonym: LIC13482

Alternate gene names: 45659297

Gene position: 4258056-4259075 (Clockwise)

Preceding gene: 45659291

Following gene: 45659298

Centisome position: 99.55

GC content: 34.9

Gene sequence:

>1020_bases
GTGGATATTAAAGCAACTTCTGCACTCATCTATTATAGACTTCGTTATAAGTACCAAGAATATAAGCTCAAATTAGACCT
AAAACTTTCAGAGCTAAATAGAAAGGGAAAAGAAAGACTTACTGTAATGGTAATTCCCCATTCAGAACAAAAAACGATCA
ACTTTCACATTTCTTATAGAGCGATTTCAATTTTTATTGGAACGATTTTTATTCTTCTAATTATCAGTTCGATCAATGTC
TTAAGTCATAGTGGTTCCGTTCATCAACTTACAGAACTCAATCTTTCCAACAAAGACTTCATTCGGCAATCTGCTAAGAT
GAAGGAAGAAATCAATTCTCTTCATGAATATGTTGAATACTATTATGGAAGATTAGCTCGGCTTTATATAAGACTCGGCG
GAGATCCAGCAAAAGTTTCTAAAGGAATTGGAGGTGCGGAACAACTTTCTACACAACCTCCTTCTATTATAGAACCAAAG
TCGATAACTCCTCAAACAAACGATCTTCCGGAAGGTGCTGCAGTTTTTAGATTGAAAGAAGACGTTCATAATTTAAAAAT
CAGTAATGAACTTACGCAAGATATTATTTCTATTCTTAAAAAAAGAAAAAATATTCTTAAACAAACTCCTTCCATCTGGC
CTGTGAAAGGTTATGTCCTTTATCCATATGGCGCTTACTTAAATCCGATTTCAGGTAGAAGAGAATACAATAACGGTGTT
GATATTGGTTCATTTGCAGGTTCTGAAGTTTTTGCAACCGCTCCCGGAACTGTATATGAAATCGGTTATACAAGAAACAC
AGGTTATTTCGTAAAAGTTTCTCACAAATACGGATGGAAAACAATCTATTCGAATATGGACCGACTGAAAGTAAAACAAG
GACAACAAGTTTCCAAAACTGAAGTAATCGGATTTGTAGGTAAAACCGAAGCGTCTCCGAATTATATGCTTCATTATGAA
ATTCATGTTGGAACAAGAGCGATCAATCCGTTTGCTTTCCTCAATCAGATTCAGGACTAA

Upstream 100 bases:

>100_bases
GTCACTTTTTGTGAATTCGATTGACTGAAAAGAGATTTTTTAAGATCTCTTCAGATAGGTAAAACGACTCGGCTGAAAAC
CAAGTTTCGGGACATAAACC

Downstream 100 bases:

>100_bases
TGGCAACCACAGAAGAACATCTAATCGTAAACAGTATCATAGGTGAGGGTGCAGAATTCAGCGGAGAATTTAAACTCACC
GGGCTTTTAAGAATCGACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MDIKATSALIYYRLRYKYQEYKLKLDLKLSELNRKGKERLTVMVIPHSEQKTINFHISYRAISIFIGTIFILLIISSINV
LSHSGSVHQLTELNLSNKDFIRQSAKMKEEINSLHEYVEYYYGRLARLYIRLGGDPAKVSKGIGGAEQLSTQPPSIIEPK
SITPQTNDLPEGAAVFRLKEDVHNLKISNELTQDIISILKKRKNILKQTPSIWPVKGYVLYPYGAYLNPISGRREYNNGV
DIGSFAGSEVFATAPGTVYEIGYTRNTGYFVKVSHKYGWKTIYSNMDRLKVKQGQQVSKTEVIGFVGKTEASPNYMLHYE
IHVGTRAINPFAFLNQIQD

Sequences:

>Translated_339_residues
MDIKATSALIYYRLRYKYQEYKLKLDLKLSELNRKGKERLTVMVIPHSEQKTINFHISYRAISIFIGTIFILLIISSINV
LSHSGSVHQLTELNLSNKDFIRQSAKMKEEINSLHEYVEYYYGRLARLYIRLGGDPAKVSKGIGGAEQLSTQPPSIIEPK
SITPQTNDLPEGAAVFRLKEDVHNLKISNELTQDIISILKKRKNILKQTPSIWPVKGYVLYPYGAYLNPISGRREYNNGV
DIGSFAGSEVFATAPGTVYEIGYTRNTGYFVKVSHKYGWKTIYSNMDRLKVKQGQQVSKTEVIGFVGKTEASPNYMLHYE
IHVGTRAINPFAFLNQIQD
>Mature_339_residues
MDIKATSALIYYRLRYKYQEYKLKLDLKLSELNRKGKERLTVMVIPHSEQKTINFHISYRAISIFIGTIFILLIISSINV
LSHSGSVHQLTELNLSNKDFIRQSAKMKEEINSLHEYVEYYYGRLARLYIRLGGDPAKVSKGIGGAEQLSTQPPSIIEPK
SITPQTNDLPEGAAVFRLKEDVHNLKISNELTQDIISILKKRKNILKQTPSIWPVKGYVLYPYGAYLNPISGRREYNNGV
DIGSFAGSEVFATAPGTVYEIGYTRNTGYFVKVSHKYGWKTIYSNMDRLKVKQGQQVSKTEVIGFVGKTEASPNYMLHYE
IHVGTRAINPFAFLNQIQD

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=104, Percent_Identity=31.7307692307692, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 38584; Mature: 38584

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKATSALIYYRLRYKYQEYKLKLDLKLSELNRKGKERLTVMVIPHSEQKTINFHISYR
CCCCHHHHEEEEEEEEEEEEEEEEEEEEHHHHCCCCCCEEEEEEEECCCCEEEEEEEEHH
AISIFIGTIFILLIISSINVLSHSGSVHQLTELNLSNKDFIRQSAKMKEEINSLHEYVEY
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
YYGRLARLYIRLGGDPAKVSKGIGGAEQLSTQPPSIIEPKSITPQTNDLPEGAAVFRLKE
HHHHHEEEEEEECCCHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHEEEEHH
DVHNLKISNELTQDIISILKKRKNILKQTPSIWPVKGYVLYPYGAYLNPISGRREYNNGV
HHHHEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEECCCCCCCCCCCCC
DIGSFAGSEVFATAPGTVYEIGYTRNTGYFVKVSHKYGWKTIYSNMDRLKVKQGQQVSKT
CCCCCCCCCEEEECCCEEEEEEEEECCCEEEEEECCCCHHHHHCCHHHHHHHCCCCCCHH
EVIGFVGKTEASPNYMLHYEIHVGTRAINPFAFLNQIQD
HEEEEEECCCCCCCEEEEEEEEECCCCCCHHHHHHHHCC
>Mature Secondary Structure
MDIKATSALIYYRLRYKYQEYKLKLDLKLSELNRKGKERLTVMVIPHSEQKTINFHISYR
CCCCHHHHEEEEEEEEEEEEEEEEEEEEHHHHCCCCCCEEEEEEEECCCCEEEEEEEEHH
AISIFIGTIFILLIISSINVLSHSGSVHQLTELNLSNKDFIRQSAKMKEEINSLHEYVEY
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
YYGRLARLYIRLGGDPAKVSKGIGGAEQLSTQPPSIIEPKSITPQTNDLPEGAAVFRLKE
HHHHHEEEEEEECCCHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHEEEEHH
DVHNLKISNELTQDIISILKKRKNILKQTPSIWPVKGYVLYPYGAYLNPISGRREYNNGV
HHHHEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEECCCCCCCCCCCCC
DIGSFAGSEVFATAPGTVYEIGYTRNTGYFVKVSHKYGWKTIYSNMDRLKVKQGQQVSKT
CCCCCCCCCEEEECCCEEEEEEEEECCCEEEEEECCCCHHHHHCCHHHHHHHCCCCCCHH
EVIGFVGKTEASPNYMLHYEIHVGTRAINPFAFLNQIQD
HEEEEEECCCCCCCEEEEEEEEECCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]