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The map label for this gene is ywdK [H]

Identifier: 45659279

GI number: 45659279

Start: 4237740

End: 4238126

Strand: Direct

Name: ywdK [H]

Synonym: LIC13462

Alternate gene names: 45659279

Gene position: 4237740-4238126 (Clockwise)

Preceding gene: 45659278

Following gene: 45659283

Centisome position: 99.08

GC content: 34.11

Gene sequence:

>387_bases
ATGACAGTAAAACAAAAAACAATTCTCGTATTTACGTCTTTATTTGGATTTTTAGGAGTGGCTTTAGGAGCCTTTGGAGC
ACACGGACTAAAATCAATCTTAAGCCCAGAGATGTTATCGATCTACGAAACCGGAAATCGGTATCACTTGATTCATACCA
TTCCTCCTTTAATTTTAGCTTTGACTGGTCATCTAAACAACAATGGACTTGTTTGGATTTCTTCGATTCTATTTCTTGCA
GGAATCTTAATATTTTCCGGGTCTTTATATATATTATCTGTTACTGGAATCAAAATTTTAGGAGCAATTACACCAATTGG
TGGAATTTCATTCTTAATTGCTTGGGCTTTTTTAGGATTTTCAGTAATTCGATCAAAAAGCGACTAA

Upstream 100 bases:

>100_bases
TATAGAACAAACCGCTTATCTATTTTGGTTGATTCAAAAAAGATGTATTCGGTTTAAAAGTTATGCTATTCAAGAATTTT
AAATCGATTTCATTGAACTT

Downstream 100 bases:

>100_bases
CGTTTAGTTCCATAATAGAATTTTCCATTTTTTACGATCAGTTTTCGAGTGATCAAACCTTCTGCGATTATTAAAAGGCC
CTGGACGGCAGATTCCTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MTVKQKTILVFTSLFGFLGVALGAFGAHGLKSILSPEMLSIYETGNRYHLIHTIPPLILALTGHLNNNGLVWISSILFLA
GILIFSGSLYILSVTGIKILGAITPIGGISFLIAWAFLGFSVIRSKSD

Sequences:

>Translated_128_residues
MTVKQKTILVFTSLFGFLGVALGAFGAHGLKSILSPEMLSIYETGNRYHLIHTIPPLILALTGHLNNNGLVWISSILFLA
GILIFSGSLYILSVTGIKILGAITPIGGISFLIAWAFLGFSVIRSKSD
>Mature_127_residues
TVKQKTILVFTSLFGFLGVALGAFGAHGLKSILSPEMLSIYETGNRYHLIHTIPPLILALTGHLNNNGLVWISSILFLAG
ILIFSGSLYILSVTGIKILGAITPIGGISFLIAWAFLGFSVIRSKSD

Specific function: Unknown

COG id: COG2363

COG function: function code S; Uncharacterized small membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0382 family [H]

Homologues:

Organism=Escherichia coli, GI1789172, Length=126, Percent_Identity=34.9206349206349, Blast_Score=78, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI193203406, Length=116, Percent_Identity=32.7586206896552, Blast_Score=65, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006696 [H]

Pfam domain/function: PF04241 DUF423 [H]

EC number: NA

Molecular weight: Translated: 13689; Mature: 13557

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVKQKTILVFTSLFGFLGVALGAFGAHGLKSILSPEMLSIYETGNRYHLIHTIPPLILA
CCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHEECCCEEEEEEHHHHHHHH
LTGHLNNNGLVWISSILFLAGILIFSGSLYILSVTGIKILGAITPIGGISFLIAWAFLGF
HHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHH
SVIRSKSD
HHHHCCCC
>Mature Secondary Structure 
TVKQKTILVFTSLFGFLGVALGAFGAHGLKSILSPEMLSIYETGNRYHLIHTIPPLILA
CCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHEECCCEEEEEEHHHHHHHH
LTGHLNNNGLVWISSILFLAGILIFSGSLYILSVTGIKILGAITPIGGISFLIAWAFLGF
HHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHH
SVIRSKSD
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]