Click here to switch to the map view.

The map label for this gene is 45659278

Identifier: 45659278

GI number: 45659278

Start: 4237134

End: 4237721

Strand: Direct

Name: 45659278

Synonym: LIC13461

Alternate gene names: NA

Gene position: 4237134-4237721 (Clockwise)

Preceding gene: 45659277

Following gene: 45659279

Centisome position: 99.06

GC content: 35.2

Gene sequence:

>588_bases
ATGAAATCCCAAATTAAAATATTCACCTTAACCGTATTAGGAGTTATTTTATTTTCAAACTGTATTTTAGCGATTGGAAA
TCGCAGAACGCTAGTTAAACGAAATCCTATGCCTTATCCGACAGATGGAATTTTGTCACCCGAAAATCACGTTTCCGTTG
CAGGAACCTACTTTAGAGATCCATCAATTCATTACGGAAATGCATCCACACGATTACGTTTATTCGGATTCGATGGATTT
ATTCATTCCACATCCTCGTTGCCTCATAAAGACATGTTTCACGGATCTTTAGATGACTGGGACTGGTCTAAACATAGAAT
CATTCGTTTTGAAGGAGAAAGTCAAGGATGTCAAAGAGGAGTAACGTTAGTTTTACCTCTAAGACAAGGAGAACGCGAAA
CCTTAATTCCCATCTCTTTTGTTTTCGGTAAGACTAGTTTTTACGAAGAGCTTAGACAAGAAATGGAAAAGAACAAGATC
AAAGCCCTTTTTGATTCTAAATTAGATATAGAACAAACCGCTTATCTATTTTGGTTGATTCAAAAAAGATGTATTCGGTT
TAAAAGTTATGCTATTCAAGAATTTTAA

Upstream 100 bases:

>100_bases
AATCTATATTTTTCAATTTATATTTTTATAAATGTACTCGTGTAACCGGAATTGGTGTTAAACTTCCTCATCGATTGATA
AAAAAAGAATAGATTCAAGT

Downstream 100 bases:

>100_bases
ATCGATTTCATTGAACTTATGACAGTAAAACAAAAAACAATTCTCGTATTTACGTCTTTATTTGGATTTTTAGGAGTGGC
TTTAGGAGCCTTTGGAGCAC

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MKSQIKIFTLTVLGVILFSNCILAIGNRRTLVKRNPMPYPTDGILSPENHVSVAGTYFRDPSIHYGNASTRLRLFGFDGF
IHSTSSLPHKDMFHGSLDDWDWSKHRIIRFEGESQGCQRGVTLVLPLRQGERETLIPISFVFGKTSFYEELRQEMEKNKI
KALFDSKLDIEQTAYLFWLIQKRCIRFKSYAIQEF

Sequences:

>Translated_195_residues
MKSQIKIFTLTVLGVILFSNCILAIGNRRTLVKRNPMPYPTDGILSPENHVSVAGTYFRDPSIHYGNASTRLRLFGFDGF
IHSTSSLPHKDMFHGSLDDWDWSKHRIIRFEGESQGCQRGVTLVLPLRQGERETLIPISFVFGKTSFYEELRQEMEKNKI
KALFDSKLDIEQTAYLFWLIQKRCIRFKSYAIQEF
>Mature_195_residues
MKSQIKIFTLTVLGVILFSNCILAIGNRRTLVKRNPMPYPTDGILSPENHVSVAGTYFRDPSIHYGNASTRLRLFGFDGF
IHSTSSLPHKDMFHGSLDDWDWSKHRIIRFEGESQGCQRGVTLVLPLRQGERETLIPISFVFGKTSFYEELRQEMEKNKI
KALFDSKLDIEQTAYLFWLIQKRCIRFKSYAIQEF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22628; Mature: 22628

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSQIKIFTLTVLGVILFSNCILAIGNRRTLVKRNPMPYPTDGILSPENHVSVAGTYFRD
CCCCEEEHHHHHHHHHHHHHHHEEECCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECC
PSIHYGNASTRLRLFGFDGFIHSTSSLPHKDMFHGSLDDWDWSKHRIIRFEGESQGCQRG
CCEEECCCCCEEEEEEECCEEECCCCCCCCHHCCCCCCCCCCCCEEEEEEECCCCCCCCC
VTLVLPLRQGERETLIPISFVFGKTSFYEELRQEMEKNKIKALFDSKLDIEQTAYLFWLI
CEEEEECCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
QKRCIRFKSYAIQEF
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSQIKIFTLTVLGVILFSNCILAIGNRRTLVKRNPMPYPTDGILSPENHVSVAGTYFRD
CCCCEEEHHHHHHHHHHHHHHHEEECCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECC
PSIHYGNASTRLRLFGFDGFIHSTSSLPHKDMFHGSLDDWDWSKHRIIRFEGESQGCQRG
CCEEECCCCCEEEEEEECCEEECCCCCCCCHHCCCCCCCCCCCCEEEEEEECCCCCCCCC
VTLVLPLRQGERETLIPISFVFGKTSFYEELRQEMEKNKIKALFDSKLDIEQTAYLFWLI
CEEEEECCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
QKRCIRFKSYAIQEF
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA