Click here to switch to the map view.

The map label for this gene is yejB [H]

Identifier: 45659199

GI number: 45659199

Start: 4145545

End: 4146555

Strand: Direct

Name: yejB [H]

Synonym: LIC13382

Alternate gene names: 45659199

Gene position: 4145545-4146555 (Clockwise)

Preceding gene: 45659198

Following gene: 45659200

Centisome position: 96.92

GC content: 36.4

Gene sequence:

>1011_bases
ATGAAAAAATATTTCCTTAAACGATTCCTTCTAATCATTCCTACACTATTGGGAATGACTTTTATCGTCTTTTTAATTTC
TCATTTTGCGCCAGGTGGTCCACTTGAAACCGAAATCGCAAAAATCAGAGGTTATGCAAGTTCTCAAGGAGGAAGCGCTA
AAACAATTTCAGAAGAAGAAATAAATATAATTAAAAAAAGATTACATTTAGATAAACCAGTTGGAATCGCTTATCTTTAT
TGGCTCAAAGAAATTTTGACTTTCAATTTGGGAGAATCCAGACTTCATACTCGACCGGTATCCGAACTGATCTTGGAAAA
ACTTCCGGTATCTCTCACGTTCGGTCTTTCTGGATTTTTACTTTCATATCTGATTTGTATCCCTTTAGGAATTACTAAAG
CACTTCGAAACGGAGAACGTTTCGACATAACATCCAGCGGAATCATTTTAATCACGTATTCAATTCCGGTATTTGCACTT
TCGGTTCTACTTCTTTATACATTCGCTTCGGGTGAACTATTATCTATCTTTCCTTTAGGTCACGAGGTTTCGGACGAATA
TGAATCTCTATCTTCTTGGGAAAAAGTAATCGATCGAATCGAACACATGTTTCTTCCAGTAATCTGTTACGTTTCCGGTT
CGTTTGCAGTTCTCACCTTGCTTATGAAAAACTCACTTTTAGATCAAATTTCGAAAGAATATGTTCGTACGGCTCTTTCC
AAAGGTTTTAGTTTTCAAGAAGCCATCTTTAAACACGCACTTCGTAATTCTTTAATTCCTATCGCGACAGGTTTTGGAAA
CAACCTCAGTTTGATTTTTGCGGGATCTTTGGTTATAGAGCTCGTATTTAATATAGACGGAATGGGACTTTTAAGTTTTC
AAGCAGTTACCGAAAGGGATACGGATTTGATGATGGGGCTTTTATTTGTACAAAGCCTTCTTTCTTTAGTCGGAAACATT
CTATCAGACTTTTGTTATGTACTCATAGATCCGAGGATTCAGTTCGAATGA

Upstream 100 bases:

>100_bases
AACAAATCGATTGAATTCTCTTAACAATTAAGATTCTTTTTTGAAAAAGGCTTTGTCTTAGGATCCGATTTCTTAAAACT
GTTTTCCTGGAAATAAAATA

Downstream 100 bases:

>100_bases
TATTAAGTCCGATTTTAAAAAAAAGATTCCAAAAATTTAGAACAAACAAAAGAGCTTGGTATTCTTTAAACATATTAATA
ATTTCTTATATAATTTCTTT

Product: dipeptide ABC transport system permease protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MKKYFLKRFLLIIPTLLGMTFIVFLISHFAPGGPLETEIAKIRGYASSQGGSAKTISEEEINIIKKRLHLDKPVGIAYLY
WLKEILTFNLGESRLHTRPVSELILEKLPVSLTFGLSGFLLSYLICIPLGITKALRNGERFDITSSGIILITYSIPVFAL
SVLLLYTFASGELLSIFPLGHEVSDEYESLSSWEKVIDRIEHMFLPVICYVSGSFAVLTLLMKNSLLDQISKEYVRTALS
KGFSFQEAIFKHALRNSLIPIATGFGNNLSLIFAGSLVIELVFNIDGMGLLSFQAVTERDTDLMMGLLFVQSLLSLVGNI
LSDFCYVLIDPRIQFE

Sequences:

>Translated_336_residues
MKKYFLKRFLLIIPTLLGMTFIVFLISHFAPGGPLETEIAKIRGYASSQGGSAKTISEEEINIIKKRLHLDKPVGIAYLY
WLKEILTFNLGESRLHTRPVSELILEKLPVSLTFGLSGFLLSYLICIPLGITKALRNGERFDITSSGIILITYSIPVFAL
SVLLLYTFASGELLSIFPLGHEVSDEYESLSSWEKVIDRIEHMFLPVICYVSGSFAVLTLLMKNSLLDQISKEYVRTALS
KGFSFQEAIFKHALRNSLIPIATGFGNNLSLIFAGSLVIELVFNIDGMGLLSFQAVTERDTDLMMGLLFVQSLLSLVGNI
LSDFCYVLIDPRIQFE
>Mature_336_residues
MKKYFLKRFLLIIPTLLGMTFIVFLISHFAPGGPLETEIAKIRGYASSQGGSAKTISEEEINIIKKRLHLDKPVGIAYLY
WLKEILTFNLGESRLHTRPVSELILEKLPVSLTFGLSGFLLSYLICIPLGITKALRNGERFDITSSGIILITYSIPVFAL
SVLLLYTFASGELLSIFPLGHEVSDEYESLSSWEKVIDRIEHMFLPVICYVSGSFAVLTLLMKNSLLDQISKEYVRTALS
KGFSFQEAIFKHALRNSLIPIATGFGNNLSLIFAGSLVIELVFNIDGMGLLSFQAVTERDTDLMMGLLFVQSLLSLVGNI
LSDFCYVLIDPRIQFE

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=362, Percent_Identity=39.7790055248619, Blast_Score=260, Evalue=7e-71,
Organism=Escherichia coli, GI1789965, Length=353, Percent_Identity=29.4617563739377, Blast_Score=158, Evalue=5e-40,
Organism=Escherichia coli, GI1787497, Length=336, Percent_Identity=26.7857142857143, Blast_Score=138, Evalue=5e-34,
Organism=Escherichia coli, GI1787053, Length=336, Percent_Identity=28.2738095238095, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI1789888, Length=334, Percent_Identity=26.6467065868263, Blast_Score=118, Evalue=5e-28,
Organism=Escherichia coli, GI1787550, Length=269, Percent_Identity=25.2788104089219, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1787761, Length=341, Percent_Identity=25.8064516129032, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37526; Mature: 37526

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYFLKRFLLIIPTLLGMTFIVFLISHFAPGGPLETEIAKIRGYASSQGGSAKTISEEE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHH
INIIKKRLHLDKPVGIAYLYWLKEILTFNLGESRLHTRPVSELILEKLPVSLTFGLSGFL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHCCCCEEECHHHHH
LSYLICIPLGITKALRNGERFDITSSGIILITYSIPVFALSVLLLYTFASGELLSIFPLG
HHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECHHHHHHHHHHHHHHCCCCEEEEEECC
HEVSDEYESLSSWEKVIDRIEHMFLPVICYVSGSFAVLTLLMKNSLLDQISKEYVRTALS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGFSFQEAIFKHALRNSLIPIATGFGNNLSLIFAGSLVIELVFNIDGMGLLSFQAVTERD
CCCCHHHHHHHHHHHCCCCEEEECCCCCEEHEEHHHHHHHHHHCCCCCCHHHHHHHHHCC
TDLMMGLLFVQSLLSLVGNILSDFCYVLIDPRIQFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKKYFLKRFLLIIPTLLGMTFIVFLISHFAPGGPLETEIAKIRGYASSQGGSAKTISEEE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHH
INIIKKRLHLDKPVGIAYLYWLKEILTFNLGESRLHTRPVSELILEKLPVSLTFGLSGFL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHCCCCEEECHHHHH
LSYLICIPLGITKALRNGERFDITSSGIILITYSIPVFALSVLLLYTFASGELLSIFPLG
HHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECHHHHHHHHHHHHHHCCCCEEEEEECC
HEVSDEYESLSSWEKVIDRIEHMFLPVICYVSGSFAVLTLLMKNSLLDQISKEYVRTALS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGFSFQEAIFKHALRNSLIPIATGFGNNLSLIFAGSLVIELVFNIDGMGLLSFQAVTERD
CCCCHHHHHHHHHHHCCCCEEEECCCCCEEHEEHHHHHHHHHHCCCCCCHHHHHHHHHCC
TDLMMGLLFVQSLLSLVGNILSDFCYVLIDPRIQFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]