| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
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The map label for this gene is 45659198
Identifier: 45659198
GI number: 45659198
Start: 4144322
End: 4145443
Strand: Direct
Name: 45659198
Synonym: LIC13381
Alternate gene names: NA
Gene position: 4144322-4145443 (Clockwise)
Preceding gene: 45659197
Following gene: 45659199
Centisome position: 96.89
GC content: 35.47
Gene sequence:
>1122_bases ATGACTTTCCAAAAAAATCACTATAATTTATTTTCAGTTAAGTACAAGTATTCGATTGGAATTTATTTTTTACTTTCGGT CTTTTTCTCCGTTGGAGCCGAGAATCATCCTTTCGTTTTTCCAAAAGATCATTCCTTTCACCCTCATTACAAAGTAGAAT GGTGCTATTTCGTTGGTATTCTTCGATCCGCAGAAGGAAAACAATACGGTTACGAACTCAGTTTTTTTAAAGGAATTTTC GGCAAAAATAGGGAAGCCTTTCCAGTTCACTTTGCAATCTCTGATTTGGAAAATAAAACACATACGATCTCACAAACCGT AGAACGCAGATTAGGTGGAATGGCTGGTTATGATTCGAAACAAATTTTCAGCGGAGACTTTATTCTTAAAATTGAAAGTA ACTCAAAATTTCACCTAATTGCAAAACCAAAACATTCTCCAGAACTTTCTTTAGATCTAATCTTAAACGGAGATAATTCT GAAATACTTTTACACGGCAACAAAGGTAAATCAGTCAAAAGTAGAACCGATCCGAATTTTTATTCTTACTATTATAGCAT TCCACGTCTTTCCACTCGGGGAGAACTGACTTTAAACGGAAAGAAAATTCAAATCGAAAGCGGAAATTCTTGGATGGATC ATGAATGGAGTACCCCTTTTTATTCGAATCTAAAAACGACTCTTTCTCATCCATCCAACTCTTGGGATTGGGTTTGCATT CAACTCGAAGACGGAAGCGACATTATGGCTTTTAACTTTAGAAAAACAATACATTCAAACTCTGAAAGTTTTGGCACCAT TCGTTTTAGTTCCGGAAAAAAAATTTACTTTGAACAAGAAGGCGAAATTCGACTCGTTCCTAATTCTTCCTTTTGGACCA GTCCAAGAACAAACCAAAAATATCCACTTATGTGGAATCTTTCCACTCATGTTACTTCTCAAAAAGATTCAGAGCTTTAT CTTATGATCGAACCTTTTTTTGAAGATCAAGAATTTGATTCGCGTTTTACTACTGGTTTTAGTTACTGGGAAGGTGCAGT AAAAGTCAAAGGCACTCGCGCAGGAAAGCCAGTTCAAGGCATCGGTTATTTAGAATTAAAAGGAAGCAGAAATTTAAATT GA
Upstream 100 bases:
>100_bases AAATAAAGTTTATATAAAATAGATTCCTAAAATAACGAACTAAAATAAAAAAAGGATTAAAAGAAACAAATTATAAAAAT GTACATTATCGAAAAATCTC
Downstream 100 bases:
>100_bases AAACAAATCGATTGAATTCTCTTAACAATTAAGATTCTTTTTTGAAAAAGGCTTTGTCTTAGGATCCGATTTCTTAAAAC TGTTTTCCTGGAAATAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Hydrolase; Hydrolase; Lipoprotein; ABC Transporter Type C Secreted Protein; ABC Transporter Lipoprotein; Secreted Hydrolase-Like; Twin-Arginine Translocation Pathway Signal; ABC-Type Transport System Hydrolase Component; Signal Peptide; Hydroxyneurosporene Synthase; Prefoldin Molecular Chaperone; Attachment Protein; Hydroxymethylglutaryl-Co A Reductase
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MTFQKNHYNLFSVKYKYSIGIYFLLSVFFSVGAENHPFVFPKDHSFHPHYKVEWCYFVGILRSAEGKQYGYELSFFKGIF GKNREAFPVHFAISDLENKTHTISQTVERRLGGMAGYDSKQIFSGDFILKIESNSKFHLIAKPKHSPELSLDLILNGDNS EILLHGNKGKSVKSRTDPNFYSYYYSIPRLSTRGELTLNGKKIQIESGNSWMDHEWSTPFYSNLKTTLSHPSNSWDWVCI QLEDGSDIMAFNFRKTIHSNSESFGTIRFSSGKKIYFEQEGEIRLVPNSSFWTSPRTNQKYPLMWNLSTHVTSQKDSELY LMIEPFFEDQEFDSRFTTGFSYWEGAVKVKGTRAGKPVQGIGYLELKGSRNLN
Sequences:
>Translated_373_residues MTFQKNHYNLFSVKYKYSIGIYFLLSVFFSVGAENHPFVFPKDHSFHPHYKVEWCYFVGILRSAEGKQYGYELSFFKGIF GKNREAFPVHFAISDLENKTHTISQTVERRLGGMAGYDSKQIFSGDFILKIESNSKFHLIAKPKHSPELSLDLILNGDNS EILLHGNKGKSVKSRTDPNFYSYYYSIPRLSTRGELTLNGKKIQIESGNSWMDHEWSTPFYSNLKTTLSHPSNSWDWVCI QLEDGSDIMAFNFRKTIHSNSESFGTIRFSSGKKIYFEQEGEIRLVPNSSFWTSPRTNQKYPLMWNLSTHVTSQKDSELY LMIEPFFEDQEFDSRFTTGFSYWEGAVKVKGTRAGKPVQGIGYLELKGSRNLN >Mature_372_residues TFQKNHYNLFSVKYKYSIGIYFLLSVFFSVGAENHPFVFPKDHSFHPHYKVEWCYFVGILRSAEGKQYGYELSFFKGIFG KNREAFPVHFAISDLENKTHTISQTVERRLGGMAGYDSKQIFSGDFILKIESNSKFHLIAKPKHSPELSLDLILNGDNSE ILLHGNKGKSVKSRTDPNFYSYYYSIPRLSTRGELTLNGKKIQIESGNSWMDHEWSTPFYSNLKTTLSHPSNSWDWVCIQ LEDGSDIMAFNFRKTIHSNSESFGTIRFSSGKKIYFEQEGEIRLVPNSSFWTSPRTNQKYPLMWNLSTHVTSQKDSELYL MIEPFFEDQEFDSRFTTGFSYWEGAVKVKGTRAGKPVQGIGYLELKGSRNLN
Specific function: Unknown
COG id: COG5621
COG function: function code R; Predicted secreted hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43087; Mature: 42956
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFQKNHYNLFSVKYKYSIGIYFLLSVFFSVGAENHPFVFPKDHSFHPHYKVEWCYFVGI CCCCCCCCEEEEEEEEEECHHHHHHHHHHHCCCCCCCEECCCCCCCCCCEEEEEEEEEEE LRSAEGKQYGYELSFFKGIFGKNREAFPVHFAISDLENKTHTISQTVERRLGGMAGYDSK HHCCCCCCCCEEEHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCC QIFSGDFILKIESNSKFHLIAKPKHSPELSLDLILNGDNSEILLHGNKGKSVKSRTDPNF EEECCEEEEEEECCCEEEEEECCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCE YSYYYSIPRLSTRGELTLNGKKIQIESGNSWMDHEWSTPFYSNLKTTLSHPSNSWDWVCI EEEEEECCCCCCCCEEEECCEEEEEECCCCCCCCCCCCCHHHCCHHHHCCCCCCCCEEEE QLEDGSDIMAFNFRKTIHSNSESFGTIRFSSGKKIYFEQEGEIRLVPNSSFWTSPRTNQK EEECCCEEEEEEEEHHHCCCCCCEEEEEECCCCEEEEECCCCEEEEECCCCCCCCCCCCC YPLMWNLSTHVTSQKDSELYLMIEPFFEDQEFDSRFTTGFSYWEGAVKVKGTRAGKPVQG CCEEEECHHEECCCCCCEEEEEEECCCCCCCCCCCCCCCHHHCCCEEEEEECCCCCCCCC IGYLELKGSRNLN EEEEEECCCCCCC >Mature Secondary Structure TFQKNHYNLFSVKYKYSIGIYFLLSVFFSVGAENHPFVFPKDHSFHPHYKVEWCYFVGI CCCCCCCEEEEEEEEEECHHHHHHHHHHHCCCCCCCEECCCCCCCCCCEEEEEEEEEEE LRSAEGKQYGYELSFFKGIFGKNREAFPVHFAISDLENKTHTISQTVERRLGGMAGYDSK HHCCCCCCCCEEEHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCC QIFSGDFILKIESNSKFHLIAKPKHSPELSLDLILNGDNSEILLHGNKGKSVKSRTDPNF EEECCEEEEEEECCCEEEEEECCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCE YSYYYSIPRLSTRGELTLNGKKIQIESGNSWMDHEWSTPFYSNLKTTLSHPSNSWDWVCI EEEEEECCCCCCCCEEEECCEEEEEECCCCCCCCCCCCCHHHCCHHHHCCCCCCCCEEEE QLEDGSDIMAFNFRKTIHSNSESFGTIRFSSGKKIYFEQEGEIRLVPNSSFWTSPRTNQK EEECCCEEEEEEEEHHHCCCCCCEEEEEECCCCEEEEECCCCEEEEECCCCCCCCCCCCC YPLMWNLSTHVTSQKDSELYLMIEPFFEDQEFDSRFTTGFSYWEGAVKVKGTRAGKPVQG CCEEEECHHEECCCCCCEEEEEEECCCCCCCCCCCCCCCHHHCCCEEEEEECCCCCCCCC IGYLELKGSRNLN EEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA