Click here to switch to the map view.

The map label for this gene is 45659055

Identifier: 45659055

GI number: 45659055

Start: 3969851

End: 3970489

Strand: Direct

Name: 45659055

Synonym: LIC13233

Alternate gene names: NA

Gene position: 3969851-3970489 (Clockwise)

Preceding gene: 45659053

Following gene: 45659056

Centisome position: 92.81

GC content: 36.78

Gene sequence:

>639_bases
ATGAGCAAGTTACAGGAACTTAAAGAAAGGATTCGTTTTCGAAACACCGACTTTCAAAGAAACTATGAAAGTAGATATTA
TTGGTTTCCGGAAGAATCTCCGCCGTTTTGTATTATAGAAGTAAATCAATACGATCCTTATCATGATATGACTTTATATT
TGGAAGTAGACCTCACCACATTGAAGATCGTAAACTCTGGTGTAGAAGAAAAAAGGGTTCCTTATGAAACTTGTCCAGCC
GCAATCAAAACATACGATTATTTAGTAGGAGAAGAAATGTCCTACGTAAAATTGATGAATCGTTTTCCAGCGGACAAAAC
GTTAGGTTGTCTTCATATCAACGAGCTGATTCAAAACGCGGCTATGAATTTTCATTCCGCATACGCCTTTTATCTTAAAG
AAAGAAATTTTCCGGCCCAACTAGACGAATACAAAATGTACGAAGGAAACCTTCCCGCTCGAGAAAGAAGAGAAATCGGA
AGGCACTGGTGGATGAAAGATAGAGGAGTCAAAAATTCCTGTTATTCTTTTTCCACACGTCACGAAAAACCGGAACTCAA
AGATCAAGTGAAACATCTTGACAGTATTACTGCAATGATGGTAAAAGAATTTAAGAAATCGAAGAAAGAAAAACTTTGA

Upstream 100 bases:

>100_bases
ACGGAAAAATTCTTTAGAGAATTGAGTCTAGTGAAAAGATGATCCTGAAAGAAACGGAAAATGTTTTATTGAAAACGTTT
CTTTAAAATAAGAGGTTTGA

Downstream 100 bases:

>100_bases
GTTTACAATTTGCACTTAGGTAACGCATTAAAGATGCGCCTAACGTTACATCTTCGTAAAACGGACATAAAGTTCCGTTT
TTTTGAAAGTTAAAGTTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MSKLQELKERIRFRNTDFQRNYESRYYWFPEESPPFCIIEVNQYDPYHDMTLYLEVDLTTLKIVNSGVEEKRVPYETCPA
AIKTYDYLVGEEMSYVKLMNRFPADKTLGCLHINELIQNAAMNFHSAYAFYLKERNFPAQLDEYKMYEGNLPARERREIG
RHWWMKDRGVKNSCYSFSTRHEKPELKDQVKHLDSITAMMVKEFKKSKKEKL

Sequences:

>Translated_212_residues
MSKLQELKERIRFRNTDFQRNYESRYYWFPEESPPFCIIEVNQYDPYHDMTLYLEVDLTTLKIVNSGVEEKRVPYETCPA
AIKTYDYLVGEEMSYVKLMNRFPADKTLGCLHINELIQNAAMNFHSAYAFYLKERNFPAQLDEYKMYEGNLPARERREIG
RHWWMKDRGVKNSCYSFSTRHEKPELKDQVKHLDSITAMMVKEFKKSKKEKL
>Mature_211_residues
SKLQELKERIRFRNTDFQRNYESRYYWFPEESPPFCIIEVNQYDPYHDMTLYLEVDLTTLKIVNSGVEEKRVPYETCPAA
IKTYDYLVGEEMSYVKLMNRFPADKTLGCLHINELIQNAAMNFHSAYAFYLKERNFPAQLDEYKMYEGNLPARERREIGR
HWWMKDRGVKNSCYSFSTRHEKPELKDQVKHLDSITAMMVKEFKKSKKEKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25503; Mature: 25372

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLQELKERIRFRNTDFQRNYESRYYWFPEESPPFCIIEVNQYDPYHDMTLYLEVDLTT
CCHHHHHHHHHHHCCCCHHCCCCCCEEECCCCCCCEEEEEECCCCCCCCEEEEEEECHHH
LKIVNSGVEEKRVPYETCPAAIKTYDYLVGEEMSYVKLMNRFPADKTLGCLHINELIQNA
EEHHHCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH
AMNFHSAYAFYLKERNFPAQLDEYKMYEGNLPARERREIGRHWWMKDRGVKNSCYSFSTR
HHHHHHHHEEEEECCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCC
HEKPELKDQVKHLDSITAMMVKEFKKSKKEKL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKLQELKERIRFRNTDFQRNYESRYYWFPEESPPFCIIEVNQYDPYHDMTLYLEVDLTT
CHHHHHHHHHHHCCCCHHCCCCCCEEECCCCCCCEEEEEECCCCCCCCEEEEEEECHHH
LKIVNSGVEEKRVPYETCPAAIKTYDYLVGEEMSYVKLMNRFPADKTLGCLHINELIQNA
EEHHHCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH
AMNFHSAYAFYLKERNFPAQLDEYKMYEGNLPARERREIGRHWWMKDRGVKNSCYSFSTR
HHHHHHHHEEEEECCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCC
HEKPELKDQVKHLDSITAMMVKEFKKSKKEKL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA