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The map label for this gene is 45659036

Identifier: 45659036

GI number: 45659036

Start: 3942741

End: 3943325

Strand: Direct

Name: 45659036

Synonym: LIC13214

Alternate gene names: NA

Gene position: 3942741-3943325 (Clockwise)

Preceding gene: 45659035

Following gene: 45659037

Centisome position: 92.18

GC content: 36.07

Gene sequence:

>585_bases
ATGGAACTGTTTTTAAACTACGCACTTTACGTAATCGTCAGCATTGGATTTTTAATTCCCTTTACCGGATTTGTAATCGG
AGCCGGAACGATTATCAAAGCGACTCTCGTGGGGTTTGCCGTTAACTTTTCTTCTCAAGTTTTAGAAGAAAATAAACTCC
AAGACTTTATCGAAAGAAACAAAGACAACAAATTAGGAAAGTTTCTTCAAGAAGTAGTTCTAAAAGGCCAAGAAAAATTA
AAAAGTAGTCCTACTAAAGAGGCTCACAAAGAAGAAAGCCACGGTTCGCACCATGTCATTTCTGTTAAAACTTATTCTCT
AATTTTTGCTACTTTGATTTTCTTTACATTTGTCACCGTTTGGGTTGCGGGTATCGACTTCGGTGCGATGAACGTAATCA
TAGCAATGGCGGTAGCAACTGCAAAAGCTTCCTTAGTTCTCGGATATTTTATGCATCTTAAATATGATACTTTGATGAAC
AGGGTCATCTTTGGATCTGGATTTTTCTTTCTTCTATTATTGTTTGGGTTTTCTGCAGCAGATATTTTTACAAGATTTAA
GGTTTTACTTTCTTTCGCATTCTGA

Upstream 100 bases:

>100_bases
AAATGGAGGAAACGAATTCTTTACTGAAATGTACTTGAGGCTTTTTCAGACCCTGACAGTATGTCCTATAAACCATCCGC
AACCAACTTTAGGATAAAAA

Downstream 100 bases:

>100_bases
TCAATAAACACTAATCTTTTAAAAAGTTCAAAAGCCGATCGTGGAGATCGGCTTTTTTATTTCTAGAAACCATTTCGAAA
TTGAATTCATAGAACAACTC

Product: putative cytochrome oxidase subunit

Products: ferricytochrome c; H2O

Alternate protein names: Caa(3)-Type Oxidase Subunit IV

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MELFLNYALYVIVSIGFLIPFTGFVIGAGTIIKATLVGFAVNFSSQVLEENKLQDFIERNKDNKLGKFLQEVVLKGQEKL
KSSPTKEAHKEESHGSHHVISVKTYSLIFATLIFFTFVTVWVAGIDFGAMNVIIAMAVATAKASLVLGYFMHLKYDTLMN
RVIFGSGFFFLLLLFGFSAADIFTRFKVLLSFAF

Sequences:

>Translated_194_residues
MELFLNYALYVIVSIGFLIPFTGFVIGAGTIIKATLVGFAVNFSSQVLEENKLQDFIERNKDNKLGKFLQEVVLKGQEKL
KSSPTKEAHKEESHGSHHVISVKTYSLIFATLIFFTFVTVWVAGIDFGAMNVIIAMAVATAKASLVLGYFMHLKYDTLMN
RVIFGSGFFFLLLLFGFSAADIFTRFKVLLSFAF
>Mature_194_residues
MELFLNYALYVIVSIGFLIPFTGFVIGAGTIIKATLVGFAVNFSSQVLEENKLQDFIERNKDNKLGKFLQEVVLKGQEKL
KSSPTKEAHKEESHGSHHVISVKTYSLIFATLIFFTFVTVWVAGIDFGAMNVIIAMAVATAKASLVLGYFMHLKYDTLMN
RVIFGSGFFFLLLLFGFSAADIFTRFKVLLSFAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.9.3.1

Molecular weight: Translated: 21665; Mature: 21665

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELFLNYALYVIVSIGFLIPFTGFVIGAGTIIKATLVGFAVNFSSQVLEENKLQDFIERN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KDNKLGKFLQEVVLKGQEKLKSSPTKEAHKEESHGSHHVISVKTYSLIFATLIFFTFVTV
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHH
WVAGIDFGAMNVIIAMAVATAKASLVLGYFMHLKYDTLMNRVIFGSGFFFLLLLFGFSAA
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHH
DIFTRFKVLLSFAF
HHHHHHHHHHHHCC
>Mature Secondary Structure
MELFLNYALYVIVSIGFLIPFTGFVIGAGTIIKATLVGFAVNFSSQVLEENKLQDFIERN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KDNKLGKFLQEVVLKGQEKLKSSPTKEAHKEESHGSHHVISVKTYSLIFATLIFFTFVTV
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHH
WVAGIDFGAMNVIIAMAVATAKASLVLGYFMHLKYDTLMNRVIFGSGFFFLLLLFGFSAA
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHH
DIFTRFKVLLSFAF
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ferrocytochrome c; O2

Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA