Click here to switch to the map view.

The map label for this gene is 45659037

Identifier: 45659037

GI number: 45659037

Start: 3944351

End: 3945034

Strand: Direct

Name: 45659037

Synonym: LIC13215

Alternate gene names: NA

Gene position: 3944351-3945034 (Clockwise)

Preceding gene: 45659036

Following gene: 45659038

Centisome position: 92.22

GC content: 30.7

Gene sequence:

>684_bases
TTGACTCACTTTTCTTTATCTAAGATTTTTTCATTTTCCGGAGAATTCTTTATGAAATACAATTTAATTCGTATTCTATT
TTTCTTATCTATCTTAATACTTATAATCTTGAGTTGTAAAAAAGAACATACACTTCATCCGGATACACAAGTGATTCAAA
TTCCAGCTCTCGGACTTGGACTTGACTACAAGGGCTGGTATTTTAGCAGCAATGAAACTCTTTTAGATCAAACGGAAAAA
TCTATATCGAACCCAGAGGTCAAAAAGGCTCTGGAAGTAGTAGAAATTAATTTTTTTCTATTTGAATATCCTCAAAGTAG
TGCACAAGCCAAACCATTTAATACGAACATTAATTATACGATTGAAGATCTTTCTAAACAACCAAGGGAAACTACCTTGG
ATGATTATGCTTCCGCAATAACCGGATTTTATCCGACAGTATTTCAAAAATACGAAATGATCAGCCCTCCTAAAAAATCT
AAAATTCACGGAATGGAAAATTTACTTTTAGAAGGCAGATTTGAACAATCCGTTGATGGTAAAAATGTAAAAATTCACAA
TTATCAAAGGATTTTTATCGTTAATAAAAAAGCTCACGTTTTTACGGGAACATTTTTAGACAAAGATTCAAGATCTAAAG
GTCCCAAAGTTTTAGAAGTTTTAACTAAATTTGTTAAATTATAA

Upstream 100 bases:

>100_bases
ATTGCCAAATGCAACCTGTCGAGCGCCCATAGAAGCGAGACGCTGAGTTTCACAAAAATGTAGGAATACTGCATTTTATT
AAAAACTTCTAAAGAATCAA

Downstream 100 bases:

>100_bases
ATTCAACTTCAAATCGTACACACTCAAAAATATATAATAGAGTCCAATTTTCAAACGGAGATTCTTTTAAAGTTCAAGCC
TTATTGCAATCAGTAAAAAA

Product: putative lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MTHFSLSKIFSFSGEFFMKYNLIRILFFLSILILIILSCKKEHTLHPDTQVIQIPALGLGLDYKGWYFSSNETLLDQTEK
SISNPEVKKALEVVEINFFLFEYPQSSAQAKPFNTNINYTIEDLSKQPRETTLDDYASAITGFYPTVFQKYEMISPPKKS
KIHGMENLLLEGRFEQSVDGKNVKIHNYQRIFIVNKKAHVFTGTFLDKDSRSKGPKVLEVLTKFVKL

Sequences:

>Translated_227_residues
MTHFSLSKIFSFSGEFFMKYNLIRILFFLSILILIILSCKKEHTLHPDTQVIQIPALGLGLDYKGWYFSSNETLLDQTEK
SISNPEVKKALEVVEINFFLFEYPQSSAQAKPFNTNINYTIEDLSKQPRETTLDDYASAITGFYPTVFQKYEMISPPKKS
KIHGMENLLLEGRFEQSVDGKNVKIHNYQRIFIVNKKAHVFTGTFLDKDSRSKGPKVLEVLTKFVKL
>Mature_226_residues
THFSLSKIFSFSGEFFMKYNLIRILFFLSILILIILSCKKEHTLHPDTQVIQIPALGLGLDYKGWYFSSNETLLDQTEKS
ISNPEVKKALEVVEINFFLFEYPQSSAQAKPFNTNINYTIEDLSKQPRETTLDDYASAITGFYPTVFQKYEMISPPKKSK
IHGMENLLLEGRFEQSVDGKNVKIHNYQRIFIVNKKAHVFTGTFLDKDSRSKGPKVLEVLTKFVKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26195; Mature: 26063

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHFSLSKIFSFSGEFFMKYNLIRILFFLSILILIILSCKKEHTLHPDTQVIQIPALGLG
CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCEECC
LDYKGWYFSSNETLLDQTEKSISNPEVKKALEVVEINFFLFEYPQSSAQAKPFNTNINYT
CCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCEE
IEDLSKQPRETTLDDYASAITGFYPTVFQKYEMISPPKKSKIHGMENLLLEGRFEQSVDG
EHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCC
KNVKIHNYQRIFIVNKKAHVFTGTFLDKDSRSKGPKVLEVLTKFVKL
CCEEEECEEEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
THFSLSKIFSFSGEFFMKYNLIRILFFLSILILIILSCKKEHTLHPDTQVIQIPALGLG
CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCEECC
LDYKGWYFSSNETLLDQTEKSISNPEVKKALEVVEINFFLFEYPQSSAQAKPFNTNINYT
CCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCEE
IEDLSKQPRETTLDDYASAITGFYPTVFQKYEMISPPKKSKIHGMENLLLEGRFEQSVDG
EHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCC
KNVKIHNYQRIFIVNKKAHVFTGTFLDKDSRSKGPKVLEVLTKFVKL
CCEEEECEEEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA