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The map label for this gene is 45658999

Identifier: 45658999

GI number: 45658999

Start: 3889551

End: 3891122

Strand: Direct

Name: 45658999

Synonym: LIC13177

Alternate gene names: NA

Gene position: 3889551-3891122 (Clockwise)

Preceding gene: 45658997

Following gene: 45659003

Centisome position: 90.94

GC content: 31.62

Gene sequence:

>1572_bases
TTGGATCCAGATTCGCTTTACGATCATGAGAAATACGAAAACCTCATGCCTTCGTATTTGTATCTGAAAAACGAGGCAGA
TGCCACCGATCAAGAGGCAATTTCCTTAAATCCAAAAGAAATAGAAATCCTCTATCAAATTAGAAATCATACGACCCTGG
AAGGTTTTTTTTCAGGTAAAATCTTAAAGGTATGGAAAGACGAAGGTTCAAAACCTATCTACGTAAATACTTTGAAAAAA
CTTGTTAACGAGAATTTGATTCTAGTATTTCCGGAGTTTAAATTTTTAAAAGAGACCAATCAACTTGCGGTCTGTCTCTG
TCTCATCTCAGAAAAAGAATTCAAAAGTTCTAATCGAGAAAAATTAAAAGAAATTTATCTAAATAGTCTAAGCAAATCCG
CACTGGCAATTCAAAACTATATTTTGGAAAGTGAACCTTACCAAATTAGCGAATTAATGTCTATATTTGAATATTTAATT
ACGGAAAACGCCGAAGGAACCTTCATTAAACAATCTTTTAATATCAAAAATTGGATTCATTCTTTCACATTCAAAGAACT
TCTAAAAGAAGAAGTGATCGAGGATTCGGTTCAATTTATTTTAGAAAACATTCAAGAAAGTGAATATATTGCTGTTACAA
AAAGTATCGGACTTTTTCATCTAACTGACGAACTTACCGAAAAAGCGTTTGAAATTCTAAAAGGATACTACCTCAACCAG
TTTTCTCAAAAATTAAAAGAAAATTATCAAACCGCTTGGGAACTGATTTCGAAAAATCGAAAGAACATAGTGGTAGACGT
CAATTATTCCGGCCCCATCTCAGGTCTCGAAGAAAAATTCGTTTCAGAAGAATTAAAGATTATAGGCGAAAATCTGAACG
GTTTGATTCCGAAAACGTTTCGAGATTTTTTGATCATAGCAAACTATATTTCACAAAAACACGATCAAGAAAGAAATCAC
AGTGCCTCCGGAGAAGACCTAAAATCGATCAAGATGTTAAAAACGATGATGACTATGAAAAGCTCCAATTTATCGCAGTT
TGTAGTTATCAATTCGGATGAGGATCGGGAATTTTCTCATTCCATAGTAGACAATCTAAGAAGAGATCCAGATTGTATTT
CTTGCGATTGGTATGAAAAAGGAAAAAAAATGGAATGTTTTTGCAGTAAAAAAGAAGACATCATTATTTCCTTAATGAAA
CTAATGGTGGAAAAATACGCTTTCAAAAAAGATACTATTAGAAATTTCTTATATCTTTTAAAAAAAGAAAAAAATAATCT
CGGAAACTTATATCAGAACGCAAATTTTAAACTAGCTCTCATACAATTGAAATATTCTTGTTATAAAGAAAATCTCTCTT
GGTTTTCTAAAATATTAAATTTTTTAGGAATTTATAAATTGTTACAAACCTACTTGGAACACGAGGAATCCATCGTTCAA
TTAGAGCAACTCAATAGAGAAATTGTATATAAGGAAAATCGAAAAAAACAATTGGAAAAAATCAGAGCAGAATGGCTCAG
AGAAATCGAAGCAGATTCCAACTTAGTCACAGAAAAAAAAGCAGAATCCTAA

Upstream 100 bases:

>100_bases
CCTTTAGTAGAACTTTTGAATATTTTTTACTATTTTTGATTCTAATATAGTATAAAATCGTAAAACTTCGTCCTAAAATT
TATCGCAAGAGGTAAAGAAT

Downstream 100 bases:

>100_bases
AAACAGAATCGATATTATACGTAGGTCATTTCTTAATTTCAAAAGTTCTAAAGTTTCCTTTTGGATCTTCCCAAGTAATC
AGGGCTTCTTTTACTTCAGA

Product: exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MDPDSLYDHEKYENLMPSYLYLKNEADATDQEAISLNPKEIEILYQIRNHTTLEGFFSGKILKVWKDEGSKPIYVNTLKK
LVNENLILVFPEFKFLKETNQLAVCLCLISEKEFKSSNREKLKEIYLNSLSKSALAIQNYILESEPYQISELMSIFEYLI
TENAEGTFIKQSFNIKNWIHSFTFKELLKEEVIEDSVQFILENIQESEYIAVTKSIGLFHLTDELTEKAFEILKGYYLNQ
FSQKLKENYQTAWELISKNRKNIVVDVNYSGPISGLEEKFVSEELKIIGENLNGLIPKTFRDFLIIANYISQKHDQERNH
SASGEDLKSIKMLKTMMTMKSSNLSQFVVINSDEDREFSHSIVDNLRRDPDCISCDWYEKGKKMECFCSKKEDIIISLMK
LMVEKYAFKKDTIRNFLYLLKKEKNNLGNLYQNANFKLALIQLKYSCYKENLSWFSKILNFLGIYKLLQTYLEHEESIVQ
LEQLNREIVYKENRKKQLEKIRAEWLREIEADSNLVTEKKAES

Sequences:

>Translated_523_residues
MDPDSLYDHEKYENLMPSYLYLKNEADATDQEAISLNPKEIEILYQIRNHTTLEGFFSGKILKVWKDEGSKPIYVNTLKK
LVNENLILVFPEFKFLKETNQLAVCLCLISEKEFKSSNREKLKEIYLNSLSKSALAIQNYILESEPYQISELMSIFEYLI
TENAEGTFIKQSFNIKNWIHSFTFKELLKEEVIEDSVQFILENIQESEYIAVTKSIGLFHLTDELTEKAFEILKGYYLNQ
FSQKLKENYQTAWELISKNRKNIVVDVNYSGPISGLEEKFVSEELKIIGENLNGLIPKTFRDFLIIANYISQKHDQERNH
SASGEDLKSIKMLKTMMTMKSSNLSQFVVINSDEDREFSHSIVDNLRRDPDCISCDWYEKGKKMECFCSKKEDIIISLMK
LMVEKYAFKKDTIRNFLYLLKKEKNNLGNLYQNANFKLALIQLKYSCYKENLSWFSKILNFLGIYKLLQTYLEHEESIVQ
LEQLNREIVYKENRKKQLEKIRAEWLREIEADSNLVTEKKAES
>Mature_523_residues
MDPDSLYDHEKYENLMPSYLYLKNEADATDQEAISLNPKEIEILYQIRNHTTLEGFFSGKILKVWKDEGSKPIYVNTLKK
LVNENLILVFPEFKFLKETNQLAVCLCLISEKEFKSSNREKLKEIYLNSLSKSALAIQNYILESEPYQISELMSIFEYLI
TENAEGTFIKQSFNIKNWIHSFTFKELLKEEVIEDSVQFILENIQESEYIAVTKSIGLFHLTDELTEKAFEILKGYYLNQ
FSQKLKENYQTAWELISKNRKNIVVDVNYSGPISGLEEKFVSEELKIIGENLNGLIPKTFRDFLIIANYISQKHDQERNH
SASGEDLKSIKMLKTMMTMKSSNLSQFVVINSDEDREFSHSIVDNLRRDPDCISCDWYEKGKKMECFCSKKEDIIISLMK
LMVEKYAFKKDTIRNFLYLLKKEKNNLGNLYQNANFKLALIQLKYSCYKENLSWFSKILNFLGIYKLLQTYLEHEESIVQ
LEQLNREIVYKENRKKQLEKIRAEWLREIEADSNLVTEKKAES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61547; Mature: 61547

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPDSLYDHEKYENLMPSYLYLKNEADATDQEAISLNPKEIEILYQIRNHTTLEGFFSGK
CCCCCCCCHHHHHHCCCHHEEEECCCCCCCCHHCCCCCHHEEEEEEHHCCCEEHHHHCCC
ILKVWKDEGSKPIYVNTLKKLVNENLILVFPEFKFLKETNQLAVCLCLISEKEFKSSNRE
EEEEEECCCCCCEEHHHHHHHHCCCEEEEECCHHHHHHCCHHHHHHHHHCCHHHCCCHHH
KLKEIYLNSLSKSALAIQNYILESEPYQISELMSIFEYLITENAEGTFIKQSFNIKNWIH
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHH
SFTFKELLKEEVIEDSVQFILENIQESEYIAVTKSIGLFHLTDELTEKAFEILKGYYLNQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHH
FSQKLKENYQTAWELISKNRKNIVVDVNYSGPISGLEEKFVSEELKIIGENLNGLIPKTF
HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHH
RDFLIIANYISQKHDQERNHSASGEDLKSIKMLKTMMTMKSSNLSQFVVINSDEDREFSH
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHH
SIVDNLRRDPDCISCDWYEKGKKMECFCSKKEDIIISLMKLMVEKYAFKKDTIRNFLYLL
HHHHHHCCCCCCCCCCHHHCCCCEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKEKNNLGNLYQNANFKLALIQLKYSCYKENLSWFSKILNFLGIYKLLQTYLEHEESIVQ
HHHHCCHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEQLNREIVYKENRKKQLEKIRAEWLREIEADSNLVTEKKAES
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MDPDSLYDHEKYENLMPSYLYLKNEADATDQEAISLNPKEIEILYQIRNHTTLEGFFSGK
CCCCCCCCHHHHHHCCCHHEEEECCCCCCCCHHCCCCCHHEEEEEEHHCCCEEHHHHCCC
ILKVWKDEGSKPIYVNTLKKLVNENLILVFPEFKFLKETNQLAVCLCLISEKEFKSSNRE
EEEEEECCCCCCEEHHHHHHHHCCCEEEEECCHHHHHHCCHHHHHHHHHCCHHHCCCHHH
KLKEIYLNSLSKSALAIQNYILESEPYQISELMSIFEYLITENAEGTFIKQSFNIKNWIH
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHH
SFTFKELLKEEVIEDSVQFILENIQESEYIAVTKSIGLFHLTDELTEKAFEILKGYYLNQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHH
FSQKLKENYQTAWELISKNRKNIVVDVNYSGPISGLEEKFVSEELKIIGENLNGLIPKTF
HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHH
RDFLIIANYISQKHDQERNHSASGEDLKSIKMLKTMMTMKSSNLSQFVVINSDEDREFSH
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHH
SIVDNLRRDPDCISCDWYEKGKKMECFCSKKEDIIISLMKLMVEKYAFKKDTIRNFLYLL
HHHHHHCCCCCCCCCCHHHCCCCEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKEKNNLGNLYQNANFKLALIQLKYSCYKENLSWFSKILNFLGIYKLLQTYLEHEESIVQ
HHHHCCHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEQLNREIVYKENRKKQLEKIRAEWLREIEADSNLVTEKKAES
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA