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The map label for this gene is trkA

Identifier: 45658997

GI number: 45658997

Start: 3887319

End: 3888029

Strand: Direct

Name: trkA

Synonym: LIC13175

Alternate gene names: 45658997

Gene position: 3887319-3888029 (Clockwise)

Preceding gene: 45658996

Following gene: 45658999

Centisome position: 90.88

GC content: 37.41

Gene sequence:

>711_bases
ATGGCGATTAAAAGAAAAAATAAAACTCTCAAAAAAAGAATCGCGGTTATCGGTCTGGGAGAATTCGGCAAGGCCTTAGT
CGTCTATTTGAATGAAAACGGACACGAGGTTACCGCAATAGATAAAGACATAAAAATCATAGAAGAAATTAAAGACTTTT
GTGCTCTCGCTGTATGTGTGGATACGAGCAATCGAACTTCATTAGAAGAATTAGATTTAGAAGACATGGATGAAATCGTA
GTCGCACTCGCTGAAAATTTCGAATCACTGATCACAACTGCATACAATTTAAAAGCGATGAATCTGAAATCATTACACAT
ACGTTATCATTCCGAATTGAATCGTAAAATACTTCAAATGATCGGAATCGAAAACCTTTTTAATCCGGAAGAAAGAGCGG
CAGCCTCCATGGCGGAACAACTGAGTTATCAGGGAGTTAAAAAGGCTACTTTGTTAAGCGAAGAATATAGTCTTTTTGAA
GTGGAAATTTCACCTCTTCTTTACGGTACAAAACTAAAAGAACTCAACCTTAGGGAAAATTTTCAGCTTAACTTAGTTGC
AATTAGAAGAGCAGAATCCAATGGAAGTGAATCGGAAGGGGGAGTGTTTCTCCCCAATTCTAGAACGATATTTCGAGAGA
AAGAAATTCTGATCCTATTCGGAAAGTCCGAAAGTATCAAACAGTTTACGAACGCCTATCCCATTGGATAA

Upstream 100 bases:

>100_bases
CGGAATGTTGACAATACTGATCGCATTTGTTCCTAAAGAAAAAAAATCCGGACTTAAATTTCCGGAAGAATCAGTCATAG
TAGGATAAAGGAGAAACCTC

Downstream 100 bases:

>100_bases
GGTATTTCTTTGGAAACCTCGTCTATCTTTTTTAAAACATCCTCTGATAAAATCACGTTCTTAGCCTTTAAACTTTCTTC
CAATTGTTCCACTGTATTCG

Product: potassium uptake system protein

Products: NA

Alternate protein names: K(+)-uptake protein ktrC; ORF4 [H]

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MAIKRKNKTLKKRIAVIGLGEFGKALVVYLNENGHEVTAIDKDIKIIEEIKDFCALAVCVDTSNRTSLEELDLEDMDEIV
VALAENFESLITTAYNLKAMNLKSLHIRYHSELNRKILQMIGIENLFNPEERAAASMAEQLSYQGVKKATLLSEEYSLFE
VEISPLLYGTKLKELNLRENFQLNLVAIRRAESNGSESEGGVFLPNSRTIFREKEILILFGKSESIKQFTNAYPIG

Sequences:

>Translated_236_residues
MAIKRKNKTLKKRIAVIGLGEFGKALVVYLNENGHEVTAIDKDIKIIEEIKDFCALAVCVDTSNRTSLEELDLEDMDEIV
VALAENFESLITTAYNLKAMNLKSLHIRYHSELNRKILQMIGIENLFNPEERAAASMAEQLSYQGVKKATLLSEEYSLFE
VEISPLLYGTKLKELNLRENFQLNLVAIRRAESNGSESEGGVFLPNSRTIFREKEILILFGKSESIKQFTNAYPIG
>Mature_235_residues
AIKRKNKTLKKRIAVIGLGEFGKALVVYLNENGHEVTAIDKDIKIIEEIKDFCALAVCVDTSNRTSLEELDLEDMDEIVV
ALAENFESLITTAYNLKAMNLKSLHIRYHSELNRKILQMIGIENLFNPEERAAASMAEQLSYQGVKKATLLSEEYSLFEV
EISPLLYGTKLKELNLRENFQLNLVAIRRAESNGSESEGGVFLPNSRTIFREKEILILFGKSESIKQFTNAYPIG

Specific function: Catalytic subunit of the KtrCD potassium uptake transporter. The 2 major potassium transporter complexes KtrAB and KtrCD confer resistance to both suddenly imposed and prolonged osmotic stress [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 26664; Mature: 26533

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIKRKNKTLKKRIAVIGLGEFGKALVVYLNENGHEVTAIDKDIKIIEEIKDFCALAVCV
CCCCCCCHHHHHHEEEEECCCCCCEEEEEECCCCCEEEEECHHHHHHHHHHHHHEEEEEE
DTSNRTSLEELDLEDMDEIVVALAENFESLITTAYNLKAMNLKSLHIRYHSELNRKILQM
ECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCEEEECEEEEEEEHHHHHHHHHHHH
IGIENLFNPEERAAASMAEQLSYQGVKKATLLSEEYSLFEVEISPLLYGTKLKELNLREN
HCHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEECCEEECCCCEECCCCCC
FQLNLVAIRRAESNGSESEGGVFLPNSRTIFREKEILILFGKSESIKQFTNAYPIG
CEEEEEEEEECCCCCCCCCCCEECCCCCEEEECCEEEEEECCCHHHHHHHHCCCCC
>Mature Secondary Structure 
AIKRKNKTLKKRIAVIGLGEFGKALVVYLNENGHEVTAIDKDIKIIEEIKDFCALAVCV
CCCCCCHHHHHHEEEEECCCCCCEEEEEECCCCCEEEEECHHHHHHHHHHHHHEEEEEE
DTSNRTSLEELDLEDMDEIVVALAENFESLITTAYNLKAMNLKSLHIRYHSELNRKILQM
ECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCEEEECEEEEEEEHHHHHHHHHHHH
IGIENLFNPEERAAASMAEQLSYQGVKKATLLSEEYSLFEVEISPLLYGTKLKELNLREN
HCHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEECCEEECCCCEECCCCCC
FQLNLVAIRRAESNGSESEGGVFLPNSRTIFREKEILILFGKSESIKQFTNAYPIG
CEEEEEEEEECCCCCCCCCCCEECCCCCEEEECCEEEEEECCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969500; 9384377 [H]