| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
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The map label for this gene is lpxA
Identifier: 45658976
GI number: 45658976
Start: 3866712
End: 3867491
Strand: Reverse
Name: lpxA
Synonym: LIC13154
Alternate gene names: 45658976
Gene position: 3867491-3866712 (Counterclockwise)
Preceding gene: 45658978
Following gene: 45658975
Centisome position: 90.42
GC content: 38.85
Gene sequence:
>780_bases ATGAAAATACATCCGACTGCTATTATCGATCCAAAGGCGGAACTACATGAGTCCGTAGAGGTTGGTCCTTATTCTATTAT CGAAGGGAATGTTTCGATTCAAGAAGGTACTATAATCGAAGGACATGTAAAAATTTGTGCTGGTTCCGAAATTGGAAAAT TCAATCGTTTTCACCAAGGTGCAGTGATCGGAGTGATGCCTCAGGATTTGGGATTTAATCAACAACTTTTAACTAAAACT GTTATTGGTGATCATAATATTTTTCGAGAATATTCTAACATTCATAAGGGAACAAAAGAAGATTCTCCGACTGTGATCGG AAATAAAAACTACTTTATGGGAAATTCTCACGTAGGTCACGATTGTATTCTAGGAAATAATAATATTTTGACACACGGGG CGGTGTTGGCCGGTCACGTGACTCTGGGTAATTTTGCGTTTATTTCGGGACTTGTTGCTGTACATCAGTTTTGTTTTGTC GGAGATTACTCAATGGTTGCAGGACTTGCAAAGGTCGTTCAAGACGTTCCTCCTTATTCCACAGTGGACGGAAATCCAAG TACTGTCGTGGGACTAAACAGCGTGGGAATGAAACGAGCCGGTTTTTCTCCGGAAGTAAGAAACGCGATTAAACACGCTT ATAAAGTTATTTATCATTCCGGAATTTCGACAAGAAAAGCTTTGGACGAATTGGAAGCTTCTGGAAACTTAATTGAACAA GTTAAGTATATTATAAAATTCTTTAGAGATAGTGATCGGGGAGTTACAAATCACAGGTGA
Upstream 100 bases:
>100_bases GCTACTTTCCAGTAATATTACTCTTATTCAAGACATCTTTAAAAGCTTGAATAAAAAAGCAGAGTCAATTTTTGTATTTT AGAGCCTGTGCGAGGTTTAA
Downstream 100 bases:
>100_bases GGTTATTGATTACCGGAGGCGCCGGTTATATAGGAAGTCACGTAGTTGCCCTTCTTCTTGAAAAAAAACACGAACTTGTA ATCGTAGATAATCTAGAAAA
Product: UDP-N-acetylglucosamine acyltransferase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine acyltransferase [H]
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MKIHPTAIIDPKAELHESVEVGPYSIIEGNVSIQEGTIIEGHVKICAGSEIGKFNRFHQGAVIGVMPQDLGFNQQLLTKT VIGDHNIFREYSNIHKGTKEDSPTVIGNKNYFMGNSHVGHDCILGNNNILTHGAVLAGHVTLGNFAFISGLVAVHQFCFV GDYSMVAGLAKVVQDVPPYSTVDGNPSTVVGLNSVGMKRAGFSPEVRNAIKHAYKVIYHSGISTRKALDELEASGNLIEQ VKYIIKFFRDSDRGVTNHR
Sequences:
>Translated_259_residues MKIHPTAIIDPKAELHESVEVGPYSIIEGNVSIQEGTIIEGHVKICAGSEIGKFNRFHQGAVIGVMPQDLGFNQQLLTKT VIGDHNIFREYSNIHKGTKEDSPTVIGNKNYFMGNSHVGHDCILGNNNILTHGAVLAGHVTLGNFAFISGLVAVHQFCFV GDYSMVAGLAKVVQDVPPYSTVDGNPSTVVGLNSVGMKRAGFSPEVRNAIKHAYKVIYHSGISTRKALDELEASGNLIEQ VKYIIKFFRDSDRGVTNHR >Mature_259_residues MKIHPTAIIDPKAELHESVEVGPYSIIEGNVSIQEGTIIEGHVKICAGSEIGKFNRFHQGAVIGVMPQDLGFNQQLLTKT VIGDHNIFREYSNIHKGTKEDSPTVIGNKNYFMGNSHVGHDCILGNNNILTHGAVLAGHVTLGNFAFISGLVAVHQFCFV GDYSMVAGLAKVVQDVPPYSTVDGNPSTVVGLNSVGMKRAGFSPEVRNAIKHAYKVIYHSGISTRKALDELEASGNLIEQ VKYIIKFFRDSDRGVTNHR
Specific function: Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell [H]
COG id: COG1043
COG function: function code M; Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family. LpxA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786378, Length=254, Percent_Identity=41.7322834645669, Blast_Score=198, Evalue=3e-52, Organism=Escherichia coli, GI1786376, Length=198, Percent_Identity=25.2525252525253, Blast_Score=61, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010137 - InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: =2.3.1.129 [H]
Molecular weight: Translated: 28165; Mature: 28165
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIHPTAIIDPKAELHESVEVGPYSIIEGNVSIQEGTIIEGHVKICAGSEIGKFNRFHQG CCCCCCEEECCHHHHHHCCCCCCEEEEECCEEEECCEEEECEEEEEECCCCHHHHHHHCC AVIGVMPQDLGFNQQLLTKTVIGDHNIFREYSNIHKGTKEDSPTVIGNKNYFMGNSHVGH CEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEECCCCEEECCCCCCC DCILGNNNILTHGAVLAGHVTLGNFAFISGLVAVHQFCFVGDYSMVAGLAKVVQDVPPYS EEEECCCCEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC TVDGNPSTVVGLNSVGMKRAGFSPEVRNAIKHAYKVIYHSGISTRKALDELEASGNLIEQ CCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHH VKYIIKFFRDSDRGVTNHR HHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKIHPTAIIDPKAELHESVEVGPYSIIEGNVSIQEGTIIEGHVKICAGSEIGKFNRFHQG CCCCCCEEECCHHHHHHCCCCCCEEEEECCEEEECCEEEECEEEEEECCCCHHHHHHHCC AVIGVMPQDLGFNQQLLTKTVIGDHNIFREYSNIHKGTKEDSPTVIGNKNYFMGNSHVGH CEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEECCCCEEECCCCCCC DCILGNNNILTHGAVLAGHVTLGNFAFISGLVAVHQFCFVGDYSMVAGLAKVVQDVPPYS EEEECCCCEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC TVDGNPSTVVGLNSVGMKRAGFSPEVRNAIKHAYKVIYHSGISTRKALDELEASGNLIEQ CCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHH VKYIIKFFRDSDRGVTNHR HHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA