Click here to switch to the map view.

The map label for this gene is 45658907

Identifier: 45658907

GI number: 45658907

Start: 3766017

End: 3766490

Strand: Direct

Name: 45658907

Synonym: LIC13081

Alternate gene names: NA

Gene position: 3766017-3766490 (Clockwise)

Preceding gene: 45658904

Following gene: 45658908

Centisome position: 88.05

GC content: 31.01

Gene sequence:

>474_bases
ATGATAACGACTACTGTAACTTTTTTAGTTTCATATTCTTTAGACGATACGTTTCAATTCGTGGCGGATTTTAGAAACTT
AATTTACTGGGGAGATAAAATTTCCAATGTATCTCCAATTCTTTCCAAAAACGGAAATAGCTTTCCAATTTATGAACTAC
TTTATTCTTTTGGACCCTTCAAACTTAAGGCAAACTATTCTGCAAAAGAATGGATTCCTAATTCTAGAATGATTATGGAA
ATCCAAAGTTCGCTCATCGATCAAAGGGATATTTATACTTTTCAAATCACAGATCGAGGAACAAAAATAACGTTCACAAA
TCATTCTAAACTTAAGCTTCCTTATCACTTTATAGAAAAAATATTTGCTTCCGGGATTAGAGGAAGAATTTACAAAGAAA
TGAGGCAATTACAAAATTGTTTGTATCAGGATGAAAGTGGTTTTCCAAAACATTTTCAAATTATCCGAATTTAG

Upstream 100 bases:

>100_bases
CTGATTGTTTTCACTTTTCTTAAATTCATAAATCGCACACTCCTAGACACTCTGGTCGCAATACAAATATTTCTTAGACA
GATTTTAAGGTTACAAAAAA

Downstream 100 bases:

>100_bases
TTTTCCGATCAAAATTCCTCTTGCCTAATATTAGTTTTTAGTGAAAATGTTTTCGGTTTAGTTCCAGTGAATACTTCAAA
CAACCATTCAGTTCCTATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MITTTVTFLVSYSLDDTFQFVADFRNLIYWGDKISNVSPILSKNGNSFPIYELLYSFGPFKLKANYSAKEWIPNSRMIME
IQSSLIDQRDIYTFQITDRGTKITFTNHSKLKLPYHFIEKIFASGIRGRIYKEMRQLQNCLYQDESGFPKHFQIIRI

Sequences:

>Translated_157_residues
MITTTVTFLVSYSLDDTFQFVADFRNLIYWGDKISNVSPILSKNGNSFPIYELLYSFGPFKLKANYSAKEWIPNSRMIME
IQSSLIDQRDIYTFQITDRGTKITFTNHSKLKLPYHFIEKIFASGIRGRIYKEMRQLQNCLYQDESGFPKHFQIIRI
>Mature_157_residues
MITTTVTFLVSYSLDDTFQFVADFRNLIYWGDKISNVSPILSKNGNSFPIYELLYSFGPFKLKANYSAKEWIPNSRMIME
IQSSLIDQRDIYTFQITDRGTKITFTNHSKLKLPYHFIEKIFASGIRGRIYKEMRQLQNCLYQDESGFPKHFQIIRI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18506; Mature: 18506

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITTTVTFLVSYSLDDTFQFVADFRNLIYWGDKISNVSPILSKNGNSFPIYELLYSFGPF
CCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHCCCE
KLKANYSAKEWIPNSRMIMEIQSSLIDQRDIYTFQITDRGTKITFTNHSKLKLPYHFIEK
EEEECCCHHHCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCEECCHHHHHH
IFASGIRGRIYKEMRQLQNCLYQDESGFPKHFQIIRI
HHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
>Mature Secondary Structure
MITTTVTFLVSYSLDDTFQFVADFRNLIYWGDKISNVSPILSKNGNSFPIYELLYSFGPF
CCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHCCCE
KLKANYSAKEWIPNSRMIMEIQSSLIDQRDIYTFQITDRGTKITFTNHSKLKLPYHFIEK
EEEECCCHHHCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCEECCHHHHHH
IFASGIRGRIYKEMRQLQNCLYQDESGFPKHFQIIRI
HHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA