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The map label for this gene is ytfP [H]

Identifier: 45658870

GI number: 45658870

Start: 3714629

End: 3715867

Strand: Reverse

Name: ytfP [H]

Synonym: LIC13044

Alternate gene names: 45658870

Gene position: 3715867-3714629 (Counterclockwise)

Preceding gene: 45658871

Following gene: 45658864

Centisome position: 86.88

GC content: 38.5

Gene sequence:

>1239_bases
ATGAATTCTAGGTCGGAAGAACGACCAAAGATAGCTGTGATTGGGGGCGGAGCGGCAGGTTTTTTTGGAGCGATTCAAAT
TGCTTCCGAAGGAACTTGCGAAGTTATTCTTTTAGAAAAAGGAAAACAATTTCTTTCCAAGGTAAAAATATCAGGTGGAG
GAAGGTGTAACGTTACGCATCATTGCCTAGATCCCGAAACCCTGAGTAAAAATTATCCCAGAGGAGAAAAAGAACTTCGC
TGGGCTTTTGAGACTTTCGGCCCCAAGGATACGATTCGATGGTATGAAGAGCGTGAGGTAATTTTGAAAACAGAGGCAGA
TGGAAGGATGTTCCCGATTACTGATTCTTCCGAAACGATCCTCCAAACTTTGTTTCAAGAGGCTAAAAAAAACGGAGTAA
AATTGAAGACTCATATGGAAATTCATTCGGTGATTTCTGAGTCGAATTCCAACTTTCAAATCGAGCTTAAAACAGGAGAA
ACATTAGAATTTAATAAAATACTATTTGCTACTGGTTCCGGTAGAAAGGCTTGGAATTGGCTCGATGCGCTGGGACATAC
GATAGTAGAGCCGGTTCCTTCTTTGTTTACTTTTAAAATTTCAGATGCTCGTCTGGAAAATTTATTTGGACTTGCTTTTG
AAAATGTGGAATGTTCGTTGGTTGAATTTGGTTATTCGCAACTAGGACCTTTATTGATCACACACTGGGGCGTAAGTGGG
CCTTCAGTTTTAAAACTTTCCGCAAAAGGTGCAAGAGAGCTCTTTGAGAAAAAATACGATACAATTTTAAAAATCAATTT
TGTTCCTGGAATGAAAAAGGATGAGGTTCGAAAAAAGATTGAAAAAGAAAAAGAACTTCATCCGTCCAAATTTGTCTCTA
AAACTCCGATCCTCGGTCTTCCTAGAAGATATTGGGAAAGAATATTAGAAATTCATTTTATAGATTTTTCTAAAAAATGG
TCTGGGTTGTCGTCTAGGGATTTACACGTAATTACCGAAGAGCTAACCGACGCAAGATTTAGAATTTCGGGAAAAGGGGA
ATTTAAAGATGAGTTTGTTACCTGTGGAGGAGTGAGTCGCAAAGAAGTGAATTTTAAAACAATGGAAAGCAAAATCGTTC
CGGGAATTTTTTTTGCAGGTGAGGTTTTAGATGTGGATGGAGTTACCGGCGGTTTTAATTTTCAGAATGCTTGGACCACT
TCTTATATAGCGGCACGTGGTATTTTGAATTCAATTTAA

Upstream 100 bases:

>100_bases
TCTGAAAAGTAAGTTTTGTATTTAACACTTACAACATTTCTAAAATAGGAATCATCTTAAAATAAAATCCGATAAAAAAT
TCAAAAGAGGTTTTTTTATT

Downstream 100 bases:

>100_bases
AATTTTGCCTTAAAATTTTAAATAAGATAAATTCGGTATAAGAAAATCTGGGTGAATAAAAACTTAGATGTTACGTTGAA
ACTCAGTAAAACGCTCTATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MNSRSEERPKIAVIGGGAAGFFGAIQIASEGTCEVILLEKGKQFLSKVKISGGGRCNVTHHCLDPETLSKNYPRGEKELR
WAFETFGPKDTIRWYEEREVILKTEADGRMFPITDSSETILQTLFQEAKKNGVKLKTHMEIHSVISESNSNFQIELKTGE
TLEFNKILFATGSGRKAWNWLDALGHTIVEPVPSLFTFKISDARLENLFGLAFENVECSLVEFGYSQLGPLLITHWGVSG
PSVLKLSAKGARELFEKKYDTILKINFVPGMKKDEVRKKIEKEKELHPSKFVSKTPILGLPRRYWERILEIHFIDFSKKW
SGLSSRDLHVITEELTDARFRISGKGEFKDEFVTCGGVSRKEVNFKTMESKIVPGIFFAGEVLDVDGVTGGFNFQNAWTT
SYIAARGILNSI

Sequences:

>Translated_412_residues
MNSRSEERPKIAVIGGGAAGFFGAIQIASEGTCEVILLEKGKQFLSKVKISGGGRCNVTHHCLDPETLSKNYPRGEKELR
WAFETFGPKDTIRWYEEREVILKTEADGRMFPITDSSETILQTLFQEAKKNGVKLKTHMEIHSVISESNSNFQIELKTGE
TLEFNKILFATGSGRKAWNWLDALGHTIVEPVPSLFTFKISDARLENLFGLAFENVECSLVEFGYSQLGPLLITHWGVSG
PSVLKLSAKGARELFEKKYDTILKINFVPGMKKDEVRKKIEKEKELHPSKFVSKTPILGLPRRYWERILEIHFIDFSKKW
SGLSSRDLHVITEELTDARFRISGKGEFKDEFVTCGGVSRKEVNFKTMESKIVPGIFFAGEVLDVDGVTGGFNFQNAWTT
SYIAARGILNSI
>Mature_412_residues
MNSRSEERPKIAVIGGGAAGFFGAIQIASEGTCEVILLEKGKQFLSKVKISGGGRCNVTHHCLDPETLSKNYPRGEKELR
WAFETFGPKDTIRWYEEREVILKTEADGRMFPITDSSETILQTLFQEAKKNGVKLKTHMEIHSVISESNSNFQIELKTGE
TLEFNKILFATGSGRKAWNWLDALGHTIVEPVPSLFTFKISDARLENLFGLAFENVECSLVEFGYSQLGPLLITHWGVSG
PSVLKLSAKGARELFEKKYDTILKINFVPGMKKDEVRKKIEKEKELHPSKFVSKTPILGLPRRYWERILEIHFIDFSKKW
SGLSSRDLHVITEELTDARFRISGKGEFKDEFVTCGGVSRKEVNFKTMESKIVPGIFFAGEVLDVDGVTGGFNFQNAWTT
SYIAARGILNSI

Specific function: Unknown

COG id: COG2081

COG function: function code R; Predicted flavoproteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI2367234, Length=398, Percent_Identity=29.8994974874372, Blast_Score=147, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792
- InterPro:   IPR013027 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 46345; Mature: 46345

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSRSEERPKIAVIGGGAAGFFGAIQIASEGTCEVILLEKGKQFLSKVKISGGGRCNVTH
CCCCCCCCCEEEEEECCHHHHEEEEEEECCCCEEEEEECCCHHHHHHEECCCCCEECEEE
HCLDPETLSKNYPRGEKELRWAFETFGPKDTIRWYEEREVILKTEADGRMFPITDSSETI
ECCCHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHCCCCEEEEEECCCCCEEECCCCHHHH
LQTLFQEAKKNGVKLKTHMEIHSVISESNSNFQIELKTGETLEFNKILFATGSGRKAWNW
HHHHHHHHHHCCCEEEEHHHHHHHHHCCCCCEEEEEECCCEEEECEEEEEECCCCCHHHH
LDALGHTIVEPVPSLFTFKISDARLENLFGLAFENVECSLVEFGYSQLGPLLITHWGVSG
HHHHHHHHHHCCCCCEEEEECHHHHHHHHHHEECCCEEEHEECCHHHHCCEEEEECCCCC
PSVLKLSAKGARELFEKKYDTILKINFVPGMKKDEVRKKIEKEKELHPSKFVSKTPILGL
CCEEEEECHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCC
PRRYWERILEIHFIDFSKKWSGLSSRDLHVITEELTDARFRISGKGEFKDEFVTCGGVSR
CHHHHHHHHEEEEEECCHHCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCEEECCCCCC
KEVNFKTMESKIVPGIFFAGEVLDVDGVTGGFNFQNAWTTSYIAARGILNSI
CCCCHHHHHHHCCCCEEEECEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNSRSEERPKIAVIGGGAAGFFGAIQIASEGTCEVILLEKGKQFLSKVKISGGGRCNVTH
CCCCCCCCCEEEEEECCHHHHEEEEEEECCCCEEEEEECCCHHHHHHEECCCCCEECEEE
HCLDPETLSKNYPRGEKELRWAFETFGPKDTIRWYEEREVILKTEADGRMFPITDSSETI
ECCCHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHCCCCEEEEEECCCCCEEECCCCHHHH
LQTLFQEAKKNGVKLKTHMEIHSVISESNSNFQIELKTGETLEFNKILFATGSGRKAWNW
HHHHHHHHHHCCCEEEEHHHHHHHHHCCCCCEEEEEECCCEEEECEEEEEECCCCCHHHH
LDALGHTIVEPVPSLFTFKISDARLENLFGLAFENVECSLVEFGYSQLGPLLITHWGVSG
HHHHHHHHHHCCCCCEEEEECHHHHHHHHHHEECCCEEEHEECCHHHHCCEEEEECCCCC
PSVLKLSAKGARELFEKKYDTILKINFVPGMKKDEVRKKIEKEKELHPSKFVSKTPILGL
CCEEEEECHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCC
PRRYWERILEIHFIDFSKKWSGLSSRDLHVITEELTDARFRISGKGEFKDEFVTCGGVSR
CHHHHHHHHEEEEEECCHHCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCEEECCCCCC
KEVNFKTMESKIVPGIFFAGEVLDVDGVTGGFNFQNAWTTSYIAARGILNSI
CCCCHHHHHHHCCCCEEEECEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]